RNA–Protein interactions for RNA: ENST00000490889.2

SRGAP3-209, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-209ENST00000490889 USHBP1Q8N6Y0 703 aa23.26■■□□□ 1.31
SRGAP3-209ENST00000490889 FHDC1Q9C0D6 1143 aaPredicted RBP23.26■■□□□ 1.31
SRGAP3-209ENST00000490889 PRIM1P49642 420 aaKnown RBP23.25■■□□□ 1.31
SRGAP3-209ENST00000490889 ZCRB1Q8TBF4 217 aaKnown RBP23.25■■□□□ 1.31
SRGAP3-209ENST00000490889 AKT1S1Q96B36 256 aa23.25■■□□□ 1.31
SRGAP3-209ENST00000490889 KCNQ4P56696 695 aa23.24■■□□□ 1.31
SRGAP3-209ENST00000490889 SYTL4Q96C24 671 aaPredicted RBP23.24■■□□□ 1.31
SRGAP3-209ENST00000490889 LY75O60449 1722 aa23.24■■□□□ 1.31
SRGAP3-209ENST00000490889 QSER1Q2KHR3 1735 aa23.23■■□□□ 1.31
SRGAP3-209ENST00000490889 DCAF8L1A6NGE4 600 aa23.23■■□□□ 1.31
SRGAP3-209ENST00000490889 SYT17Q9BSW7 474 aa23.23■■□□□ 1.31
SRGAP3-209ENST00000490889 TUBGCP6Q96RT7 1819 aa23.23■■□□□ 1.31
SRGAP3-209ENST00000490889 HSP90AB2PQ58FF8 381 aa23.22■■□□□ 1.31
SRGAP3-209ENST00000490889 CARD14Q9BXL6 1004 aa23.22■■□□□ 1.31
SRGAP3-209ENST00000490889 SLC27A3Q5K4L6 730 aa23.21■■□□□ 1.31
SRGAP3-209ENST00000490889 INSRP06213 1382 aa23.2■■□□□ 1.3
SRGAP3-209ENST00000490889 SMG6Q86US8 1419 aaKnown RBP23.19■■□□□ 1.3
SRGAP3-209ENST00000490889 NSD3Q9BZ95 1437 aa23.19■■□□□ 1.3
SRGAP3-209ENST00000490889 PNPLA7Q6ZV29 1317 aa23.19■■□□□ 1.3
SRGAP3-209ENST00000490889 CDCA8Q53HL2 280 aa23.19■■□□□ 1.3
SRGAP3-209ENST00000490889 ARXQ96QS3 562 aa23.19■■□□□ 1.3
SRGAP3-209ENST00000490889 FLT4P35916 1363 aa23.18■■□□□ 1.3
SRGAP3-209ENST00000490889 COL24A1Q17RW2 1714 aa23.18■■□□□ 1.3
SRGAP3-209ENST00000490889 RAPGEF4Q8WZA2 1011 aa23.16■■□□□ 1.3
SRGAP3-209ENST00000490889 KIF24Q5T7B8 1368 aa23.15■■□□□ 1.3
SRGAP3-209ENST00000490889 CGNL1Q0VF96 1302 aa23.15■■□□□ 1.3
SRGAP3-209ENST00000490889 EMILIN1Q9Y6C2 1016 aa23.15■■□□□ 1.3
SRGAP3-209ENST00000490889 MAP3K5Q99683 1374 aa23.14■■□□□ 1.3
SRGAP3-209ENST00000490889 TATP17735 454 aaPredicted RBP23.14■■□□□ 1.29
SRGAP3-209ENST00000490889 TFCP2L1Q9NZI6 479 aa23.13■■□□□ 1.29
SRGAP3-209ENST00000490889 CCNL1Q9UK58 526 aaPredicted RBP23.13■■□□□ 1.29
SRGAP3-209ENST00000490889 ANKRD26Q9UPS8 1709 aa23.13■■□□□ 1.29
SRGAP3-209ENST00000490889 TOGARAM1Q9Y4F4 1720 aa23.13■■□□□ 1.29
SRGAP3-209ENST00000490889 SLC16A10Q8TF71 515 aa23.12■■□□□ 1.29
SRGAP3-209ENST00000490889 TIMELESSQ9UNS1 1208 aa23.11■■□□□ 1.29
SRGAP3-209ENST00000490889 PKD1L3Q7Z443 1732 aa23.11■■□□□ 1.29
SRGAP3-209ENST00000490889 PCDH11XQ9BZA7 1347 aa23.1■■□□□ 1.29
SRGAP3-209ENST00000490889 PCDH11YQ9BZA8 1340 aa23.1■■□□□ 1.29
SRGAP3-209ENST00000490889 NCAPD2Q15021 1401 aa23.1■■□□□ 1.29
SRGAP3-209ENST00000490889 CYP27B1O15528 508 aa23.1■■□□□ 1.29
SRGAP3-209ENST00000490889 GOLGB1Q14789 3259 aaKnown RBP23.08■■□□□ 1.29
SRGAP3-209ENST00000490889 C5P01031 1676 aa23.08■■□□□ 1.29
SRGAP3-209ENST00000490889 ITGB4P16144 1822 aa23.06■■□□□ 1.28
SRGAP3-209ENST00000490889 PPM1GO15355 546 aaPredicted RBP23.06■■□□□ 1.28
SRGAP3-209ENST00000490889 POLD1P28340 1107 aa23.06■■□□□ 1.28
SRGAP3-209ENST00000490889 COL23A1Q86Y22 540 aaPredicted RBP23.06■■□□□ 1.28
SRGAP3-209ENST00000490889 KLHL34Q8N239 644 aa23.06■■□□□ 1.28
SRGAP3-209ENST00000490889 PCGF6Q9BYE7 350 aa23.06■■□□□ 1.28
SRGAP3-209ENST00000490889 MAP2P11137 1827 aaKnown RBP23.05■■□□□ 1.28
SRGAP3-209ENST00000490889 PALLDQ8WX93 1383 aa23.05■■□□□ 1.28
SRGAP3-209ENST00000490889 MPRIPQ6WCQ1 1025 aa23.05■■□□□ 1.28
SRGAP3-209ENST00000490889 TAF1LQ8IZX4 1826 aa23.05■■□□□ 1.28
SRGAP3-209ENST00000490889 WASHC2AQ641Q2 1341 aa23.05■■□□□ 1.28
SRGAP3-209ENST00000490889 CLSPNQ9HAW4 1339 aa23.05■■□□□ 1.28
SRGAP3-209ENST00000490889 CHD4Q14839 1912 aa23.04■■□□□ 1.28
SRGAP3-209ENST00000490889 ZNF784Q8NCA9 323 aaPredicted RBP23.04■■□□□ 1.28
SRGAP3-209ENST00000490889 NLGN2Q8NFZ4 835 aa23.02■■□□□ 1.28
SRGAP3-209ENST00000490889 EYA1Q99502 592 aa23.02■■□□□ 1.28
SRGAP3-209ENST00000490889 POLR3GLQ9BT43 218 aa23.02■■□□□ 1.28
SRGAP3-209ENST00000490889 POLKQ9UBT6 870 aa23.02■■□□□ 1.28
SRGAP3-209ENST00000490889 MSH5O43196 834 aa23■■□□□ 1.27
SRGAP3-209ENST00000490889 C4BP0C0L5 1744 aa22.99■■□□□ 1.27
SRGAP3-209ENST00000490889 NKX1-1Q15270 411 aaPredicted RBP22.99■■□□□ 1.27
SRGAP3-209ENST00000490889 GPR162Q16538 588 aa22.99■■□□□ 1.27
SRGAP3-209ENST00000490889 MSL1Q68DK7 614 aa22.99■■□□□ 1.27
SRGAP3-209ENST00000490889 PIGBQ92521 554 aa22.99■■□□□ 1.27
SRGAP3-209ENST00000490889 AMIGO3Q86WK7 504 aa22.98■■□□□ 1.27
SRGAP3-209ENST00000490889 TNNT2P45379 298 aaPredicted RBP22.97■■□□□ 1.27
SRGAP3-209ENST00000490889 SPG7Q9UQ90 795 aa22.97■■□□□ 1.27
SRGAP3-209ENST00000490889 EIF4A2Q14240 407 aaKnown RBP22.96■■□□□ 1.27
SRGAP3-209ENST00000490889 HSPA5P11021 654 aaKnown RBP22.95■■□□□ 1.26
SRGAP3-209ENST00000490889 SMIM5Q71RC9 77 aa22.95■■□□□ 1.26
SRGAP3-209ENST00000490889 PELP1Q8IZL8 1130 aaKnown RBP22.95■■□□□ 1.26
SRGAP3-209ENST00000490889 UBR3Q6ZT12 1888 aa22.94■■□□□ 1.26
SRGAP3-209ENST00000490889 SMARCC1Q92922 1105 aaPredicted RBP22.94■■□□□ 1.26
SRGAP3-209ENST00000490889 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.93■■□□□ 1.26
SRGAP3-209ENST00000490889 PHKG2P15735 406 aa22.92■■□□□ 1.26
SRGAP3-209ENST00000490889 EIF4G2P78344 907 aaKnown RBP eCLIP22.92■■□□□ 1.26
SRGAP3-209ENST00000490889 YBX3P16989 372 aaKnown RBP eCLIP22.91■■□□□ 1.26
SRGAP3-209ENST00000490889 PANK3Q9H999 370 aa22.91■■□□□ 1.26
SRGAP3-209ENST00000490889 IFNL2Q8IZJ0 200 aa22.9■■□□□ 1.26
SRGAP3-209ENST00000490889 LINC00116Q8NCU8 138 aa22.9■■□□□ 1.26
SRGAP3-209ENST00000490889 FLAD1Q8NFF5 587 aa22.9■■□□□ 1.26
SRGAP3-209ENST00000490889 AK7Q96M32 723 aa22.9■■□□□ 1.26
SRGAP3-209ENST00000490889 ASAP1Q9ULH1 1129 aa22.9■■□□□ 1.26
SRGAP3-209ENST00000490889 IGSF1Q8N6C5 1336 aa22.89■■□□□ 1.26
SRGAP3-209ENST00000490889 LOC102724428A0A0B4J2F2 783 aa22.89■■□□□ 1.25
SRGAP3-209ENST00000490889 SIK1P57059 783 aa22.89■■□□□ 1.25
SRGAP3-209ENST00000490889 TMOD3Q9NYL9 352 aa22.89■■□□□ 1.25
SRGAP3-209ENST00000490889 PHF14O94880 888 aa22.88■■□□□ 1.25
SRGAP3-209ENST00000490889 ITPK1Q13572 414 aa22.88■■□□□ 1.25
SRGAP3-209ENST00000490889 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.87■■□□□ 1.25
SRGAP3-209ENST00000490889 HMGB2P26583 209 aaKnown RBP22.86■■□□□ 1.25
SRGAP3-209ENST00000490889 ATG3Q9NT62 314 aa22.86■■□□□ 1.25
SRGAP3-209ENST00000490889 PLEKHG2Q9H7P9 1386 aa22.85■■□□□ 1.25
SRGAP3-209ENST00000490889 CD2APQ9Y5K6 639 aa22.84■■□□□ 1.25
SRGAP3-209ENST00000490889 SSFA2P28290 1259 aa22.83■■□□□ 1.25
SRGAP3-209ENST00000490889 KDRP35968 1356 aa22.83■■□□□ 1.25
SRGAP3-209ENST00000490889 ATP6V1AP38606 617 aa22.82■■□□□ 1.24
SRGAP3-209ENST00000490889 CCER1Q8TC90 406 aaPredicted RBP22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms