RNA–Protein interactions for RNA: ENST00000490647.1

LINC02049-201, Transcript of long intergenic non-protein coding RNA 2049, humanhuman

TSL 1 (best) BASIC

Gene LINC02049, Length 747 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02049-201ENST00000490647 USP17L5A8MUK1 530 aa9.39□□□□□ -0.91
LINC02049-201ENST00000490647 BMP2P12643 396 aa9.39□□□□□ -0.91
LINC02049-201ENST00000490647 PTGIRP43119 386 aa9.38□□□□□ -0.91
LINC02049-201ENST00000490647 NCOA4Q13772 614 aa9.38□□□□□ -0.91
LINC02049-201ENST00000490647 INSM2Q96T92 566 aaPredicted RBP9.38□□□□□ -0.91
LINC02049-201ENST00000490647 TFIP11Q9UBB9 837 aaKnown RBP9.38□□□□□ -0.91
LINC02049-201ENST00000490647 PALM3A6NDB9 673 aaPredicted RBP9.37□□□□□ -0.91
LINC02049-201ENST00000490647 ATP9BO43861 1147 aa9.37□□□□□ -0.91
LINC02049-201ENST00000490647 CTSOP43234 321 aaPredicted RBP9.37□□□□□ -0.91
LINC02049-201ENST00000490647 NFATC2IPQ8NCF5 419 aa9.37□□□□□ -0.91
LINC02049-201ENST00000490647 TSEN34Q9BSV6 310 aaKnown RBP9.37□□□□□ -0.91
LINC02049-201ENST00000490647 RAB6BQ9NRW1 208 aa9.37□□□□□ -0.91
LINC02049-201ENST00000490647 ATP5J2-PTCD1G3V325 749 aa9.36□□□□□ -0.91
LINC02049-201ENST00000490647 SPINT1O43278 529 aa9.36□□□□□ -0.91
LINC02049-201ENST00000490647 SCARF1Q14162 830 aa9.36□□□□□ -0.91
LINC02049-201ENST00000490647 MAP7D1Q3KQU3 841 aa9.36□□□□□ -0.91
LINC02049-201ENST00000490647 ZNF787Q6DD87 383 aa9.36□□□□□ -0.91
LINC02049-201ENST00000490647 CCDC125Q86Z20 511 aa9.36□□□□□ -0.91
LINC02049-201ENST00000490647 TRIM47Q96LD4 638 aa9.36□□□□□ -0.91
LINC02049-201ENST00000490647 PPP1R12CQ9BZL4 782 aa9.36□□□□□ -0.91
LINC02049-201ENST00000490647 USP17L3A6NCW0 530 aa9.35□□□□□ -0.91
LINC02049-201ENST00000490647 USP17L4A6NCW7 530 aa9.35□□□□□ -0.91
LINC02049-201ENST00000490647 C11orf95C9JLR9 678 aaPredicted RBP9.35□□□□□ -0.91
LINC02049-201ENST00000490647 USP17L2Q6R6M4 530 aa9.35□□□□□ -0.91
LINC02049-201ENST00000490647 USP17L1Q7RTZ2 530 aa9.35□□□□□ -0.91
LINC02049-201ENST00000490647 ARHGEF10LQ9HCE6 1279 aa9.35□□□□□ -0.91
LINC02049-201ENST00000490647 MAFBQ9Y5Q3 323 aaPredicted RBP9.35□□□□□ -0.91
LINC02049-201ENST00000490647 A0A1W2PRU2 124 aa9.34□□□□□ -0.91
LINC02049-201ENST00000490647 MYCP01106 439 aaPredicted RBP9.34□□□□□ -0.91
LINC02049-201ENST00000490647 CFAP70Q5T0N1 1121 aa9.34□□□□□ -0.91
LINC02049-201ENST00000490647 FOXD4L5Q5VV16 416 aaPredicted RBP9.34□□□□□ -0.91
LINC02049-201ENST00000490647 PCDHGA11Q9Y5H2 935 aa9.34□□□□□ -0.91
LINC02049-201ENST00000490647 SOS2Q07890 1332 aaPredicted RBP9.33□□□□□ -0.92
LINC02049-201ENST00000490647 FIGNL2A6NMB9 653 aa9.33□□□□□ -0.92
LINC02049-201ENST00000490647 SUPT5HO00267 1087 aaKnown RBP9.33□□□□□ -0.92
LINC02049-201ENST00000490647 UPP2O95045 317 aa9.33□□□□□ -0.92
LINC02049-201ENST00000490647 USP4Q13107 963 aa9.33□□□□□ -0.92
LINC02049-201ENST00000490647 CYP2U1Q7Z449 544 aa9.33□□□□□ -0.92
LINC02049-201ENST00000490647 ZNF775Q96BV0 537 aaPredicted RBP9.33□□□□□ -0.92
LINC02049-201ENST00000490647 DNMT3LQ9UJW3 386 aa9.33□□□□□ -0.92
LINC02049-201ENST00000490647 KIAA1024Q9UPX6 916 aa9.33□□□□□ -0.92
LINC02049-201ENST00000490647 MEN1O00255 615 aa9.32□□□□□ -0.92
LINC02049-201ENST00000490647 IL2RAP01589 272 aa9.32□□□□□ -0.92
LINC02049-201ENST00000490647 EML3Q32P44 896 aa9.32□□□□□ -0.92
LINC02049-201ENST00000490647 PLEKHM2Q8IWE5 1019 aa9.32□□□□□ -0.92
LINC02049-201ENST00000490647 ETNK1Q9HBU6 452 aa9.32□□□□□ -0.92
LINC02049-201ENST00000490647 LMOD1P29536 600 aaPredicted RBP9.31□□□□□ -0.92
LINC02049-201ENST00000490647 SCNN1DP51172 638 aa9.31□□□□□ -0.92
LINC02049-201ENST00000490647 SENP2Q9HC62 589 aa9.31□□□□□ -0.92
LINC02049-201ENST00000490647 POLMQ9NP87 494 aaPredicted RBP9.31□□□□□ -0.92
LINC02049-201ENST00000490647 TTLL8A6PVC2 850 aa9.3□□□□□ -0.92
LINC02049-201ENST00000490647 RFX1P22670 979 aa9.3□□□□□ -0.92
LINC02049-201ENST00000490647 GTF2IP78347 998 aa9.3□□□□□ -0.92
LINC02049-201ENST00000490647 CLDN10P78369 228 aa9.3□□□□□ -0.92
LINC02049-201ENST00000490647 ESF1Q9H501 851 aaKnown RBP9.3□□□□□ -0.92
LINC02049-201ENST00000490647 TMEM229AB2RXF0 380 aa9.29□□□□□ -0.92
LINC02049-201ENST00000490647 CDCA8Q53HL2 280 aa9.29□□□□□ -0.92
LINC02049-201ENST00000490647 CCDC82Q8N4S0 544 aa9.29□□□□□ -0.92
LINC02049-201ENST00000490647 RNF217Q8TC41 542 aa9.29□□□□□ -0.92
LINC02049-201ENST00000490647 KIFC2Q96AC6 838 aa9.29□□□□□ -0.92
LINC02049-201ENST00000490647 MKRN1Q9UHC7 482 aaKnown RBP9.29□□□□□ -0.92
LINC02049-201ENST00000490647 NOD1Q9Y239 953 aa9.29□□□□□ -0.92
LINC02049-201ENST00000490647 HRH3Q9Y5N1 445 aa9.29□□□□□ -0.92
LINC02049-201ENST00000490647 ZBTB7BO15156 539 aaPredicted RBP9.28□□□□□ -0.92
LINC02049-201ENST00000490647 GNRH1P01148 92 aa9.28□□□□□ -0.92
LINC02049-201ENST00000490647 CLN3Q13286 438 aa9.28□□□□□ -0.92
LINC02049-201ENST00000490647 KANK4Q5T7N3 995 aaPredicted RBP9.28□□□□□ -0.92
LINC02049-201ENST00000490647 GDF10P55107 478 aa9.27□□□□□ -0.93
LINC02049-201ENST00000490647 CNKSR1Q969H4 720 aa9.27□□□□□ -0.93
LINC02049-201ENST00000490647 MAN1A2O60476 641 aa9.26□□□□□ -0.93
LINC02049-201ENST00000490647 SIRT1Q96EB6 747 aa9.26□□□□□ -0.93
LINC02049-201ENST00000490647 XAGE2Q96GT9 111 aa9.26□□□□□ -0.93
LINC02049-201ENST00000490647 SERTAD1Q9UHV2 236 aa9.26□□□□□ -0.93
LINC02049-201ENST00000490647 LZTS3O60299 673 aaPredicted RBP9.25□□□□□ -0.93
LINC02049-201ENST00000490647 DKK1O94907 266 aa9.25□□□□□ -0.93
LINC02049-201ENST00000490647 RNF144AP50876 292 aaPredicted RBP9.25□□□□□ -0.93
LINC02049-201ENST00000490647 CENPCQ03188 943 aa9.25□□□□□ -0.93
LINC02049-201ENST00000490647 CRTC2Q53ET0 693 aaPredicted RBP9.25□□□□□ -0.93
LINC02049-201ENST00000490647 OGFOD1Q8N543 542 aa9.25□□□□□ -0.93
LINC02049-201ENST00000490647 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.25□□□□□ -0.93
LINC02049-201ENST00000490647 ZNF594Q96JF6 807 aaPredicted RBP9.25□□□□□ -0.93
LINC02049-201ENST00000490647 ESYT1Q9BSJ8 1104 aa9.25□□□□□ -0.93
LINC02049-201ENST00000490647 FHDC1Q9C0D6 1143 aaPredicted RBP9.25□□□□□ -0.93
LINC02049-201ENST00000490647 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.24□□□□□ -0.93
LINC02049-201ENST00000490647 INHAP05111 366 aa9.24□□□□□ -0.93
LINC02049-201ENST00000490647 RHOQP17081 205 aa9.24□□□□□ -0.93
LINC02049-201ENST00000490647 PSME1Q06323 249 aa9.24□□□□□ -0.93
LINC02049-201ENST00000490647 PRICKLE2Q7Z3G6 844 aa9.24□□□□□ -0.93
LINC02049-201ENST00000490647 NLRP3Q96P20 1036 aa9.24□□□□□ -0.93
LINC02049-201ENST00000490647 USP3Q9Y6I4 520 aa9.24□□□□□ -0.93
LINC02049-201ENST00000490647 VEGFBP49765 207 aa9.23□□□□□ -0.93
LINC02049-201ENST00000490647 SRPK2P78362 688 aaKnown RBP9.23□□□□□ -0.93
LINC02049-201ENST00000490647 TPCN2Q8NHX9 752 aa9.23□□□□□ -0.93
LINC02049-201ENST00000490647 GRIP2Q9C0E4 1043 aa9.23□□□□□ -0.93
LINC02049-201ENST00000490647 DNAAF2Q9NVR5 837 aaKnown RBP9.23□□□□□ -0.93
LINC02049-201ENST00000490647 ZNF358Q9NW07 568 aa9.23□□□□□ -0.93
LINC02049-201ENST00000490647 RASA1P20936 1047 aa9.22□□□□□ -0.93
LINC02049-201ENST00000490647 TRIM52Q96A61 297 aa9.22□□□□□ -0.93
LINC02049-201ENST00000490647 CCDC97Q96F63 343 aaPredicted RBP9.22□□□□□ -0.93
LINC02049-201ENST00000490647 SENP3-EIF4A1A0A087X0R7 540 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms