RNA–Protein interactions for RNA: ENST00000490615.1

SHTN1-205, Transcript of shootin 1, humanhuman

TSL 3

Gene SHTN1, Length 358 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-205ENST00000490615 NOVA2Q9UNW9 492 aaKnown RBP7.57□□□□□ -1.2
SHTN1-205ENST00000490615 USTQ9Y2C2 406 aa7.57□□□□□ -1.2
SHTN1-205ENST00000490615 TMEM88BA6NKF7 163 aa7.56□□□□□ -1.2
SHTN1-205ENST00000490615 CLDN10P78369 228 aa7.56□□□□□ -1.2
SHTN1-205ENST00000490615 USP4Q13107 963 aa7.56□□□□□ -1.2
SHTN1-205ENST00000490615 TRIM50Q86XT4 487 aa7.56□□□□□ -1.2
SHTN1-205ENST00000490615 CCDC125Q86Z20 511 aa7.56□□□□□ -1.2
SHTN1-205ENST00000490615 MPNDQ8N594 471 aa7.56□□□□□ -1.2
SHTN1-205ENST00000490615 STK32AQ8WU08 396 aa7.56□□□□□ -1.2
SHTN1-205ENST00000490615 ZBTB7BO15156 539 aaPredicted RBP7.55□□□□□ -1.2
SHTN1-205ENST00000490615 ZNF697Q5TEC3 545 aa7.55□□□□□ -1.2
SHTN1-205ENST00000490615 ZNF594Q96JF6 807 aaPredicted RBP7.55□□□□□ -1.2
SHTN1-205ENST00000490615 DNAAF2Q9NVR5 837 aaKnown RBP7.55□□□□□ -1.2
SHTN1-205ENST00000490615 FSHRP23945 695 aa7.54□□□□□ -1.2
SHTN1-205ENST00000490615 SCTRP47872 440 aa7.54□□□□□ -1.2
SHTN1-205ENST00000490615 ATP1A2P50993 1020 aa7.54□□□□□ -1.2
SHTN1-205ENST00000490615 GTF2IP78347 998 aa7.54□□□□□ -1.2
SHTN1-205ENST00000490615 FOXC1Q12948 553 aa7.54□□□□□ -1.2
SHTN1-205ENST00000490615 TMEM164Q5U3C3 297 aa7.54□□□□□ -1.2
SHTN1-205ENST00000490615 ZNF598Q86UK7 904 aaKnown RBP7.54□□□□□ -1.2
SHTN1-205ENST00000490615 ANKMY2Q8IV38 441 aa7.54□□□□□ -1.2
SHTN1-205ENST00000490615 FAM200AQ8TCP9 573 aa7.54□□□□□ -1.2
SHTN1-205ENST00000490615 SIRT1Q96EB6 747 aa7.54□□□□□ -1.2
SHTN1-205ENST00000490615 PRKD2Q9BZL6 878 aa7.54□□□□□ -1.2
SHTN1-205ENST00000490615 TMPRSS4Q9NRS4 437 aa7.54□□□□□ -1.2
SHTN1-205ENST00000490615 KIAA1024Q9UPX6 916 aa7.54□□□□□ -1.2
SHTN1-205ENST00000490615 PCDHGA11Q9Y5H2 935 aa7.54□□□□□ -1.2
SHTN1-205ENST00000490615 ADH1CP00326 375 aa7.53□□□□□ -1.2
SHTN1-205ENST00000490615 DPYDQ12882 1025 aa7.53□□□□□ -1.2
SHTN1-205ENST00000490615 LARGE2Q8N3Y3 721 aa7.53□□□□□ -1.2
SHTN1-205ENST00000490615 CDK11AQ9UQ88 783 aaPredicted RBP7.53□□□□□ -1.2
SHTN1-205ENST00000490615 E9PSI1 815 aa7.52□□□□□ -1.21
SHTN1-205ENST00000490615 DKK1O94907 266 aa7.52□□□□□ -1.21
SHTN1-205ENST00000490615 MYCP01106 439 aaPredicted RBP7.52□□□□□ -1.21
SHTN1-205ENST00000490615 PKD2L1Q9P0L9 805 aa7.52□□□□□ -1.21
SHTN1-205ENST00000490615 ALDH1A1P00352 501 aa7.51□□□□□ -1.21
SHTN1-205ENST00000490615 NR3C2P08235 984 aa7.51□□□□□ -1.21
SHTN1-205ENST00000490615 ERVK-9P63128 1117 aa7.51□□□□□ -1.21
SHTN1-205ENST00000490615 PSME1Q06323 249 aa7.51□□□□□ -1.21
SHTN1-205ENST00000490615 DHX9Q08211 1270 aaKnown RBP7.51□□□□□ -1.21
SHTN1-205ENST00000490615 FAM69CQ0P6D2 419 aa7.51□□□□□ -1.21
SHTN1-205ENST00000490615 NR5A1Q13285 461 aa7.51□□□□□ -1.21
SHTN1-205ENST00000490615 PPP1R26Q5T8A7 1209 aaPredicted RBP7.51□□□□□ -1.21
SHTN1-205ENST00000490615 CCDC102BQ68D86 513 aa7.51□□□□□ -1.21
SHTN1-205ENST00000490615 CHMP4AQ9BY43 222 aa7.51□□□□□ -1.21
SHTN1-205ENST00000490615 CYLDQ9NQC7 956 aa7.51□□□□□ -1.21
SHTN1-205ENST00000490615 V9GY48 417 aaPredicted RBP7.51□□□□□ -1.21
SHTN1-205ENST00000490615 PATL2C9JE40 543 aaKnown RBP7.5□□□□□ -1.21
SHTN1-205ENST00000490615 CC2D2BQ6DHV5 1058 aa7.5□□□□□ -1.21
SHTN1-205ENST00000490615 CCDC116Q8IYX3 515 aa7.5□□□□□ -1.21
SHTN1-205ENST00000490615 FAM9AQ8IZU1 332 aaPredicted RBP7.5□□□□□ -1.21
SHTN1-205ENST00000490615 SIX5Q8N196 739 aa7.5□□□□□ -1.21
SHTN1-205ENST00000490615 ZNF784Q8NCA9 323 aaPredicted RBP7.5□□□□□ -1.21
SHTN1-205ENST00000490615 TPCN2Q8NHX9 752 aa7.5□□□□□ -1.21
SHTN1-205ENST00000490615 ESF1Q9H501 851 aaKnown RBP7.5□□□□□ -1.21
SHTN1-205ENST00000490615 SFI1A8K8P3 1242 aa7.49□□□□□ -1.21
SHTN1-205ENST00000490615 LILRA1O75019 489 aa7.49□□□□□ -1.21
SHTN1-205ENST00000490615 BRD1O95696 1058 aa7.49□□□□□ -1.21
SHTN1-205ENST00000490615 OSBPL3Q9H4L5 887 aa7.49□□□□□ -1.21
SHTN1-205ENST00000490615 SLAIN2Q9P270 581 aa7.49□□□□□ -1.21
SHTN1-205ENST00000490615 HMGB1P09429 215 aaKnown RBP7.48□□□□□ -1.21
SHTN1-205ENST00000490615 SEC13P55735 322 aa7.48□□□□□ -1.21
SHTN1-205ENST00000490615 KCNA1Q09470 495 aa7.48□□□□□ -1.21
SHTN1-205ENST00000490615 SNIP1Q8TAD8 396 aaKnown RBP7.48□□□□□ -1.21
SHTN1-205ENST00000490615 RBM19Q9Y4C8 960 aaKnown RBP7.48□□□□□ -1.21
SHTN1-205ENST00000490615 TNFRSF10AO00220 468 aa7.47□□□□□ -1.21
SHTN1-205ENST00000490615 GDF9O60383 454 aa7.47□□□□□ -1.21
SHTN1-205ENST00000490615 STAU1O95793 577 aaKnown RBP7.47□□□□□ -1.21
SHTN1-205ENST00000490615 BRD2P25440 801 aaKnown RBP7.47□□□□□ -1.21
SHTN1-205ENST00000490615 ADD1P35611 737 aaKnown RBP7.47□□□□□ -1.21
SHTN1-205ENST00000490615 NNTQ13423 1086 aa7.47□□□□□ -1.21
SHTN1-205ENST00000490615 WASF2Q9Y6W5 498 aa7.47□□□□□ -1.21
SHTN1-205ENST00000490615 J3QL48 77 aa7.46□□□□□ -1.22
SHTN1-205ENST00000490615 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.46□□□□□ -1.22
SHTN1-205ENST00000490615 CLP1Q92989 425 aaKnown RBP7.46□□□□□ -1.22
SHTN1-205ENST00000490615 PGPEP1Q9NXJ5 209 aa7.46□□□□□ -1.22
SHTN1-205ENST00000490615 EMILIN1Q9Y6C2 1016 aa7.46□□□□□ -1.22
SHTN1-205ENST00000490615 TTC24A2A3L6 582 aaPredicted RBP7.45□□□□□ -1.22
SHTN1-205ENST00000490615 LGR5O75473 907 aa7.45□□□□□ -1.22
SHTN1-205ENST00000490615 PHLDB3Q6NSJ2 640 aa7.45□□□□□ -1.22
SHTN1-205ENST00000490615 TRIM67Q6ZTA4 783 aa7.45□□□□□ -1.22
SHTN1-205ENST00000490615 CYP4X1Q8N118 509 aa7.45□□□□□ -1.22
SHTN1-205ENST00000490615 TRIM52Q96A61 297 aa7.45□□□□□ -1.22
SHTN1-205ENST00000490615 TMEM229AB2RXF0 380 aa7.44□□□□□ -1.22
SHTN1-205ENST00000490615 CDK11BP21127 795 aaKnown RBP7.44□□□□□ -1.22
SHTN1-205ENST00000490615 SSFA2P28290 1259 aa7.44□□□□□ -1.22
SHTN1-205ENST00000490615 SCNN1DP51172 638 aa7.44□□□□□ -1.22
SHTN1-205ENST00000490615 SWI5Q1ZZU3 235 aa7.44□□□□□ -1.22
SHTN1-205ENST00000490615 HINFPQ9BQA5 517 aa7.44□□□□□ -1.22
SHTN1-205ENST00000490615 ZNF358Q9NW07 568 aa7.44□□□□□ -1.22
SHTN1-205ENST00000490615 TOR4AQ9NXH8 423 aa7.44□□□□□ -1.22
SHTN1-205ENST00000490615 PRMT3O60678 531 aa7.43□□□□□ -1.22
SHTN1-205ENST00000490615 GDF10P55107 478 aa7.43□□□□□ -1.22
SHTN1-205ENST00000490615 CBLBQ13191 982 aa7.43□□□□□ -1.22
SHTN1-205ENST00000490615 TSEN2Q8NCE0 465 aaKnown RBP7.43□□□□□ -1.22
SHTN1-205ENST00000490615 PRIMPOLQ96LW4 560 aa7.43□□□□□ -1.22
SHTN1-205ENST00000490615 KLF16Q9BXK1 252 aaPredicted RBP7.43□□□□□ -1.22
SHTN1-205ENST00000490615 AMOTL2Q9Y2J4 779 aa7.43□□□□□ -1.22
SHTN1-205ENST00000490615 GNRH1P01148 92 aa7.42□□□□□ -1.22
SHTN1-205ENST00000490615 HSP90B1P14625 803 aaKnown RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms