RNA–Protein interactions for RNA: ENST00000490539.1

CSTF1-205, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-205ENST00000490539 MTMR14Q8NCE2 650 aa7.64□□□□□ -1.19
CSTF1-205ENST00000490539 TRIM34Q9BYJ4 488 aa7.64□□□□□ -1.19
CSTF1-205ENST00000490539 SNRKQ9NRH2 765 aa7.64□□□□□ -1.19
CSTF1-205ENST00000490539 FLIIQ13045 1269 aa7.63□□□□□ -1.19
CSTF1-205ENST00000490539 NR5A1Q13285 461 aa7.63□□□□□ -1.19
CSTF1-205ENST00000490539 VASH1Q7L8A9 365 aaPredicted RBP7.63□□□□□ -1.19
CSTF1-205ENST00000490539 TRMT44Q8IYL2 757 aaKnown RBP7.63□□□□□ -1.19
CSTF1-205ENST00000490539 TRIM52Q96A61 297 aa7.63□□□□□ -1.19
CSTF1-205ENST00000490539 GJD4Q96KN9 370 aaPredicted RBP7.63□□□□□ -1.19
CSTF1-205ENST00000490539 ZFP42Q96MM3 310 aa7.63□□□□□ -1.19
CSTF1-205ENST00000490539 CDK15Q96Q40 435 aa7.63□□□□□ -1.19
CSTF1-205ENST00000490539 TLL2Q9Y6L7 1015 aa7.63□□□□□ -1.19
CSTF1-205ENST00000490539 ZBBXA8MT70 800 aa7.62□□□□□ -1.19
CSTF1-205ENST00000490539 ADH1CP00326 375 aa7.62□□□□□ -1.19
CSTF1-205ENST00000490539 FAM69CQ0P6D2 419 aa7.62□□□□□ -1.19
CSTF1-205ENST00000490539 C4orf48Q5BLP8 95 aa7.62□□□□□ -1.19
CSTF1-205ENST00000490539 WWC1Q8IX03 1113 aa7.62□□□□□ -1.19
CSTF1-205ENST00000490539 C1QTNF2Q9BXJ5 285 aa7.62□□□□□ -1.19
CSTF1-205ENST00000490539 ABCC10Q5T3U5 1492 aa7.62□□□□□ -1.19
CSTF1-205ENST00000490539 NBPF20Q3BBV1 942 aa7.61□□□□□ -1.19
CSTF1-205ENST00000490539 ERFEQ4G0M1 354 aa7.61□□□□□ -1.19
CSTF1-205ENST00000490539 DZIP3Q86Y13 1208 aaKnown RBP7.61□□□□□ -1.19
CSTF1-205ENST00000490539 ADAM32Q8TC27 787 aa7.61□□□□□ -1.19
CSTF1-205ENST00000490539 MAP4K5Q9Y4K4 846 aa7.61□□□□□ -1.19
CSTF1-205ENST00000490539 GRIN2AQ12879 1464 aa7.61□□□□□ -1.19
CSTF1-205ENST00000490539 MCCD1P59942 119 aaPredicted RBP7.6□□□□□ -1.19
CSTF1-205ENST00000490539 NNTQ13423 1086 aa7.6□□□□□ -1.19
CSTF1-205ENST00000490539 IGF1RP08069 1367 aa7.59□□□□□ -1.19
CSTF1-205ENST00000490539 ADAMTS12P58397 1594 aa7.59□□□□□ -1.19
CSTF1-205ENST00000490539 RAD21O60216 631 aa7.59□□□□□ -1.19
CSTF1-205ENST00000490539 KCNMA1Q12791 1236 aa7.59□□□□□ -1.19
CSTF1-205ENST00000490539 SCARF1Q14162 830 aa7.59□□□□□ -1.19
CSTF1-205ENST00000490539 FAM9AQ8IZU1 332 aaPredicted RBP7.59□□□□□ -1.19
CSTF1-205ENST00000490539 CARMIL1Q5VZK9 1371 aa7.59□□□□□ -1.2
CSTF1-205ENST00000490539 CUL7Q14999 1698 aa7.58□□□□□ -1.2
CSTF1-205ENST00000490539 VSIG8P0DPA2 414 aa7.58□□□□□ -1.2
CSTF1-205ENST00000490539 DHX9Q08211 1270 aaKnown RBP7.58□□□□□ -1.2
CSTF1-205ENST00000490539 MCM6Q14566 821 aa7.58□□□□□ -1.2
CSTF1-205ENST00000490539 KCTD17Q8N5Z5 321 aa7.58□□□□□ -1.2
CSTF1-205ENST00000490539 FSHRP23945 695 aa7.57□□□□□ -1.2
CSTF1-205ENST00000490539 NR1H3Q13133 447 aa7.57□□□□□ -1.2
CSTF1-205ENST00000490539 MRPL14Q6P1L8 145 aaKnown RBP7.57□□□□□ -1.2
CSTF1-205ENST00000490539 KCTD15Q96SI1 283 aaPredicted RBP7.57□□□□□ -1.2
CSTF1-205ENST00000490539 DIP2BQ9P265 1576 aa7.56□□□□□ -1.2
CSTF1-205ENST00000490539 UBTFP17480 764 aaKnown RBP7.56□□□□□ -1.2
CSTF1-205ENST00000490539 GRM5P41594 1212 aa7.56□□□□□ -1.2
CSTF1-205ENST00000490539 ABL2P42684 1182 aa7.56□□□□□ -1.2
CSTF1-205ENST00000490539 WDR4P57081 412 aaKnown RBP7.56□□□□□ -1.2
CSTF1-205ENST00000490539 PGPEP1Q9NXJ5 209 aa7.56□□□□□ -1.2
CSTF1-205ENST00000490539 TBC1D2BQ9UPU7 963 aa7.56□□□□□ -1.2
CSTF1-205ENST00000490539 PCDHB9Q9Y5E1 797 aa7.56□□□□□ -1.2
CSTF1-205ENST00000490539 EMILIN1Q9Y6C2 1016 aa7.56□□□□□ -1.2
CSTF1-205ENST00000490539 EEA1Q15075 1411 aa7.55□□□□□ -1.2
CSTF1-205ENST00000490539 FBXO45P0C2W1 286 aa7.55□□□□□ -1.2
CSTF1-205ENST00000490539 EIF4G2P78344 907 aaKnown RBP eCLIP7.55□□□□□ -1.2
CSTF1-205ENST00000490539 WASHC4Q2M389 1173 aa7.55□□□□□ -1.2
CSTF1-205ENST00000490539 CCDC125Q86Z20 511 aa7.55□□□□□ -1.2
CSTF1-205ENST00000490539 CCDC116Q8IYX3 515 aa7.55□□□□□ -1.2
CSTF1-205ENST00000490539 PURBQ96QR8 312 aaKnown RBP7.55□□□□□ -1.2
CSTF1-205ENST00000490539 GDPD2Q9HCC8 539 aa7.55□□□□□ -1.2
CSTF1-205ENST00000490539 SRCAPQ6ZRS2 3230 aa7.55□□□□□ -1.2
CSTF1-205ENST00000490539 NUP160Q12769 1436 aa7.54□□□□□ -1.2
CSTF1-205ENST00000490539 UPP2O95045 317 aa7.54□□□□□ -1.2
CSTF1-205ENST00000490539 RNF20Q5VTR2 975 aa7.54□□□□□ -1.2
CSTF1-205ENST00000490539 OCSTAMPQ9BR26 566 aa7.54□□□□□ -1.2
CSTF1-205ENST00000490539 RAPGEF2Q9Y4G8 1499 aa7.54□□□□□ -1.2
CSTF1-205ENST00000490539 SOBPA7XYQ1 873 aa7.53□□□□□ -1.2
CSTF1-205ENST00000490539 SEPT12Q8IYM1 358 aa7.53□□□□□ -1.2
CSTF1-205ENST00000490539 TMEM151AQ8N4L1 468 aa7.53□□□□□ -1.2
CSTF1-205ENST00000490539 ZIC2O95409 532 aaPredicted RBP7.52□□□□□ -1.21
CSTF1-205ENST00000490539 KIAA0586Q9BVV6 1533 aa7.52□□□□□ -1.21
CSTF1-205ENST00000490539 CARMIL2Q6F5E8 1435 aa7.52□□□□□ -1.21
CSTF1-205ENST00000490539 TSPOAP1O95153 1857 aa7.51□□□□□ -1.21
CSTF1-205ENST00000490539 PCF11O94913 1555 aaKnown RBP7.51□□□□□ -1.21
CSTF1-205ENST00000490539 CEP170Q5SW79 1584 aa7.51□□□□□ -1.21
CSTF1-205ENST00000490539 NR3C2P08235 984 aa7.51□□□□□ -1.21
CSTF1-205ENST00000490539 TIMP2P16035 220 aa7.51□□□□□ -1.21
CSTF1-205ENST00000490539 GSK3AP49840 483 aa7.51□□□□□ -1.21
CSTF1-205ENST00000490539 RAB15P59190 212 aa7.51□□□□□ -1.21
CSTF1-205ENST00000490539 ESF1Q9H501 851 aaKnown RBP7.51□□□□□ -1.21
CSTF1-205ENST00000490539 PRG4Q92954 1404 aaPredicted RBP7.51□□□□□ -1.21
CSTF1-205ENST00000490539 MAN1A2O60476 641 aa7.5□□□□□ -1.21
CSTF1-205ENST00000490539 GDF11O95390 407 aa7.5□□□□□ -1.21
CSTF1-205ENST00000490539 SOX11P35716 441 aa7.5□□□□□ -1.21
CSTF1-205ENST00000490539 PPP1R26Q5T8A7 1209 aaPredicted RBP7.5□□□□□ -1.21
CSTF1-205ENST00000490539 RNF225M0QZC1 329 aaPredicted RBP7.49□□□□□ -1.21
CSTF1-205ENST00000490539 RASSF7Q02833 373 aa7.49□□□□□ -1.21
CSTF1-205ENST00000490539 SEMA3FQ13275 785 aa7.49□□□□□ -1.21
CSTF1-205ENST00000490539 INTS6LQ5JSJ4 861 aaKnown RBP7.49□□□□□ -1.21
CSTF1-205ENST00000490539 ITPKCQ96DU7 683 aa7.49□□□□□ -1.21
CSTF1-205ENST00000490539 COG6Q9Y2V7 657 aa7.49□□□□□ -1.21
CSTF1-205ENST00000490539 RUSC2Q8N2Y8 1516 aa7.48□□□□□ -1.21
CSTF1-205ENST00000490539 PPFIA3O75145 1194 aa7.48□□□□□ -1.21
CSTF1-205ENST00000490539 VAC14Q08AM6 782 aa7.48□□□□□ -1.21
CSTF1-205ENST00000490539 KLF16Q9BXK1 252 aaPredicted RBP7.48□□□□□ -1.21
CSTF1-205ENST00000490539 MAPKBP1O60336 1514 aa7.47□□□□□ -1.21
CSTF1-205ENST00000490539 ESPNB1AK53 854 aa7.47□□□□□ -1.21
CSTF1-205ENST00000490539 GPR37L1O60883 481 aa7.47□□□□□ -1.21
CSTF1-205ENST00000490539 GIGYF1O75420 1035 aaPredicted RBP7.47□□□□□ -1.21
CSTF1-205ENST00000490539 IRF5Q13568 498 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms