RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 PRDM11Q9NQV5 511 aa10.95□□□□□ -0.66
PDLIM1-203ENST00000490391 KIAA0232Q92628 1395 aa10.94□□□□□ -0.66
PDLIM1-203ENST00000490391 SBF2Q86WG5 1849 aa10.94□□□□□ -0.66
PDLIM1-203ENST00000490391 PDE3BQ13370 1112 aa10.94□□□□□ -0.66
PDLIM1-203ENST00000490391 TMEM132EQ6IEE7 984 aa10.94□□□□□ -0.66
PDLIM1-203ENST00000490391 ANKARQ7Z5J8 1434 aa10.93□□□□□ -0.66
PDLIM1-203ENST00000490391 MAP3K5Q99683 1374 aa10.93□□□□□ -0.66
PDLIM1-203ENST00000490391 PARP4Q9UKK3 1724 aaKnown RBP10.93□□□□□ -0.66
PDLIM1-203ENST00000490391 PLSCR1O15162 318 aa10.93□□□□□ -0.66
PDLIM1-203ENST00000490391 SOX12O15370 315 aa10.93□□□□□ -0.66
PDLIM1-203ENST00000490391 PMFBP1Q8TBY8 1022 aa10.93□□□□□ -0.66
PDLIM1-203ENST00000490391 SPOCK2Q92563 424 aa10.93□□□□□ -0.66
PDLIM1-203ENST00000490391 SIRT1Q96EB6 747 aa10.93□□□□□ -0.66
PDLIM1-203ENST00000490391 SSH2Q76I76 1423 aa10.92□□□□□ -0.66
PDLIM1-203ENST00000490391 PHRF1Q9P1Y6 1649 aaKnown RBP10.92□□□□□ -0.66
PDLIM1-203ENST00000490391 PCNTO95613 3336 aa10.92□□□□□ -0.66
PDLIM1-203ENST00000490391 MS4A4AQ96JQ5 239 aa10.92□□□□□ -0.66
PDLIM1-203ENST00000490391 STRN4Q9NRL3 753 aa10.92□□□□□ -0.66
PDLIM1-203ENST00000490391 PIK3C2GO75747 1445 aa10.92□□□□□ -0.66
PDLIM1-203ENST00000490391 ACIN1Q9UKV3 1341 aaKnown RBP10.91□□□□□ -0.66
PDLIM1-203ENST00000490391 LOC105371045A0A1W2PR82 267 aa10.91□□□□□ -0.66
PDLIM1-203ENST00000490391 CHRNA2Q15822 529 aa10.91□□□□□ -0.66
PDLIM1-203ENST00000490391 POTEEQ6S8J3 1075 aa10.91□□□□□ -0.66
PDLIM1-203ENST00000490391 USP35Q9P2H5 1018 aa10.91□□□□□ -0.66
PDLIM1-203ENST00000490391 PTF1AQ7RTS3 328 aa10.9□□□□□ -0.66
PDLIM1-203ENST00000490391 OVOS2A0A0G2JMS6 1433 aa10.9□□□□□ -0.66
PDLIM1-203ENST00000490391 OVOS2A0A0J9YW53 1432 aa10.9□□□□□ -0.66
PDLIM1-203ENST00000490391 OVOS2Q6IE36 1432 aa10.9□□□□□ -0.66
PDLIM1-203ENST00000490391 LMO7Q8WWI1 1683 aa10.89□□□□□ -0.67
PDLIM1-203ENST00000490391 MTFR1LQ9H019 292 aa10.89□□□□□ -0.67
PDLIM1-203ENST00000490391 GPRASP1Q5JY77 1395 aa10.89□□□□□ -0.67
PDLIM1-203ENST00000490391 PRR36Q9H6K5 1346 aa10.88□□□□□ -0.67
PDLIM1-203ENST00000490391 C11orf95C9JLR9 678 aaPredicted RBP10.88□□□□□ -0.67
PDLIM1-203ENST00000490391 LARP1Q6PKG0 1096 aaKnown RBP10.88□□□□□ -0.67
PDLIM1-203ENST00000490391 SPATA31E1Q6ZUB1 1445 aa10.88□□□□□ -0.67
PDLIM1-203ENST00000490391 TCP11L2Q8N4U5 519 aa10.88□□□□□ -0.67
PDLIM1-203ENST00000490391 AXIN2Q9Y2T1 843 aa10.88□□□□□ -0.67
PDLIM1-203ENST00000490391 DHX57Q6P158 1386 aaKnown RBP10.88□□□□□ -0.67
PDLIM1-203ENST00000490391 ATP7BP35670 1465 aa10.87□□□□□ -0.67
PDLIM1-203ENST00000490391 BCL11BQ9C0K0 894 aaPredicted RBP10.87□□□□□ -0.67
PDLIM1-203ENST00000490391 ANKRD30BQ9BXX2 1392 aa10.87□□□□□ -0.67
PDLIM1-203ENST00000490391 LRRC37A3O60309 1634 aa10.87□□□□□ -0.67
PDLIM1-203ENST00000490391 SLC15A2Q16348 729 aa10.86□□□□□ -0.67
PDLIM1-203ENST00000490391 ARXQ96QS3 562 aa10.86□□□□□ -0.67
PDLIM1-203ENST00000490391 HSPA6P17066 643 aa10.85□□□□□ -0.67
PDLIM1-203ENST00000490391 ZC3H6P61129 1189 aaKnown RBP10.85□□□□□ -0.67
PDLIM1-203ENST00000490391 SAFB2Q14151 953 aaKnown RBP eCLIP10.85□□□□□ -0.67
PDLIM1-203ENST00000490391 PRAM1Q96QH2 718 aa10.85□□□□□ -0.67
PDLIM1-203ENST00000490391 THRAP3Q9Y2W1 955 aaKnown RBP10.85□□□□□ -0.67
PDLIM1-203ENST00000490391 TULP4Q9NRJ4 1543 aa10.84□□□□□ -0.67
PDLIM1-203ENST00000490391 NUDT7P0C024 238 aa10.84□□□□□ -0.67
PDLIM1-203ENST00000490391 ITGAEP38570 1179 aa10.84□□□□□ -0.67
PDLIM1-203ENST00000490391 GPR162Q16538 588 aa10.84□□□□□ -0.67
PDLIM1-203ENST00000490391 IFNLR1Q8IU57 520 aaPredicted RBP10.84□□□□□ -0.67
PDLIM1-203ENST00000490391 STK32BQ9NY57 414 aa10.84□□□□□ -0.67
PDLIM1-203ENST00000490391 AATKQ6ZMQ8 1374 aa10.84□□□□□ -0.67
PDLIM1-203ENST00000490391 PAPPAQ13219 1627 aa10.84□□□□□ -0.67
PDLIM1-203ENST00000490391 BCL9O00512 1426 aa10.84□□□□□ -0.67
PDLIM1-203ENST00000490391 COL5A2P05997 1499 aaPredicted RBP10.83□□□□□ -0.68
PDLIM1-203ENST00000490391 CPDO75976 1380 aa10.83□□□□□ -0.68
PDLIM1-203ENST00000490391 TXNRD1Q16881 649 aa10.83□□□□□ -0.68
PDLIM1-203ENST00000490391 C14orf93Q9H972 538 aaKnown RBP10.83□□□□□ -0.68
PDLIM1-203ENST00000490391 LHX6Q9UPM6 363 aa10.83□□□□□ -0.68
PDLIM1-203ENST00000490391 COL24A1Q17RW2 1714 aa10.82□□□□□ -0.68
PDLIM1-203ENST00000490391 EVA1CP58658 441 aa10.82□□□□□ -0.68
PDLIM1-203ENST00000490391 ADGRD1Q6QNK2 874 aa10.82□□□□□ -0.68
PDLIM1-203ENST00000490391 ATP10DQ9P241 1426 aa10.82□□□□□ -0.68
PDLIM1-203ENST00000490391 WNK3Q9BYP7 1800 aa10.8□□□□□ -0.68
PDLIM1-203ENST00000490391 RGL3Q3MIN7 710 aa10.8□□□□□ -0.68
PDLIM1-203ENST00000490391 NGDNQ8NEJ9 315 aaKnown RBP10.8□□□□□ -0.68
PDLIM1-203ENST00000490391 CRB1P82279 1406 aa10.8□□□□□ -0.68
PDLIM1-203ENST00000490391 EIF3AQ14152 1382 aaKnown RBP10.79□□□□□ -0.68
PDLIM1-203ENST00000490391 CFAP70Q5T0N1 1121 aa10.79□□□□□ -0.68
PDLIM1-203ENST00000490391 MARCH10Q8NA82 808 aaPredicted RBP10.79□□□□□ -0.68
PDLIM1-203ENST00000490391 HIRIP3Q9BW71 556 aaPredicted RBP10.79□□□□□ -0.68
PDLIM1-203ENST00000490391 USP19O94966 1318 aa10.79□□□□□ -0.68
PDLIM1-203ENST00000490391 ADCY9O60503 1353 aa10.78□□□□□ -0.68
PDLIM1-203ENST00000490391 ADGRB1O14514 1584 aa10.78□□□□□ -0.68
PDLIM1-203ENST00000490391 AKAP12Q02952 1782 aa10.78□□□□□ -0.68
PDLIM1-203ENST00000490391 YBX3P16989 372 aaKnown RBP eCLIP10.78□□□□□ -0.683e-11■□□□□ 9
PDLIM1-203ENST00000490391 DDB1Q16531 1140 aa10.78□□□□□ -0.68
PDLIM1-203ENST00000490391 NUTM2GQ5VZR2 741 aa10.78□□□□□ -0.68
PDLIM1-203ENST00000490391 NLGN2Q8NFZ4 835 aa10.78□□□□□ -0.68
PDLIM1-203ENST00000490391 ITSN1Q15811 1721 aa10.78□□□□□ -0.68
PDLIM1-203ENST00000490391 TOPAZ1Q8N9V7 1692 aa10.77□□□□□ -0.69
PDLIM1-203ENST00000490391 WASLO00401 505 aaPredicted RBP10.77□□□□□ -0.69
PDLIM1-203ENST00000490391 ARHGAP33O14559 1287 aa10.77□□□□□ -0.69
PDLIM1-203ENST00000490391 POGKQ9P215 609 aa10.77□□□□□ -0.69
PDLIM1-203ENST00000490391 KIF3CO14782 793 aa10.76□□□□□ -0.69
PDLIM1-203ENST00000490391 DNAJC5GQ8N7S2 189 aa10.76□□□□□ -0.69
PDLIM1-203ENST00000490391 RGS20O76081 388 aa10.75□□□□□ -0.69
PDLIM1-203ENST00000490391 SLC34A2O95436 690 aa10.75□□□□□ -0.69
PDLIM1-203ENST00000490391 ZNF827Q17R98 1081 aa10.75□□□□□ -0.69
PDLIM1-203ENST00000490391 COL13A1Q5TAT6 717 aaPredicted RBP10.75□□□□□ -0.69
PDLIM1-203ENST00000490391 GPBP1L1Q9HC44 474 aaPredicted RBP10.75□□□□□ -0.69
PDLIM1-203ENST00000490391 PCDHGA4Q9Y5G9 962 aa10.75□□□□□ -0.69
PDLIM1-203ENST00000490391 MINK1Q8N4C8 1332 aaPredicted RBP10.75□□□□□ -0.69
PDLIM1-203ENST00000490391 POLR3AO14802 1390 aaPredicted RBP10.75□□□□□ -0.69
PDLIM1-203ENST00000490391 QSER1Q2KHR3 1735 aa10.75□□□□□ -0.69
PDLIM1-203ENST00000490391 NHSQ6T4R5 1651 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms