RNA–Protein interactions for RNA: ENST00000490387.1

RAPGEF3-212, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene RAPGEF3, Length 699 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-212ENST00000490387 NBPF14Q5TI25 921 aa23.1■■□□□ 1.29
RAPGEF3-212ENST00000490387 PPP2R1AP30153 589 aa23.09■■□□□ 1.29
RAPGEF3-212ENST00000490387 PTF1AQ7RTS3 328 aa23.08■■□□□ 1.29
RAPGEF3-212ENST00000490387 RGPD2P0DJD1 1756 aa23.08■■□□□ 1.29
RAPGEF3-212ENST00000490387 KAT6BQ8WYB5 2073 aa23.08■■□□□ 1.29
RAPGEF3-212ENST00000490387 INSRP06213 1382 aa23.07■■□□□ 1.28
RAPGEF3-212ENST00000490387 PLSCR1O15162 318 aa23.07■■□□□ 1.28
RAPGEF3-212ENST00000490387 MTHFSP49914 203 aa23.06■■□□□ 1.28
RAPGEF3-212ENST00000490387 NHSQ6T4R5 1651 aa23.06■■□□□ 1.28
RAPGEF3-212ENST00000490387 COL3A1P02461 1466 aaPredicted RBP23.05■■□□□ 1.28
RAPGEF3-212ENST00000490387 HSP90AB2PQ58FF8 381 aa23.05■■□□□ 1.28
RAPGEF3-212ENST00000490387 MYBBP1AQ9BQG0 1328 aaKnown RBP23.04■■□□□ 1.28
RAPGEF3-212ENST00000490387 PPM1GO15355 546 aaPredicted RBP23.03■■□□□ 1.28
RAPGEF3-212ENST00000490387 ACSBG1Q96GR2 724 aa23.02■■□□□ 1.28
RAPGEF3-212ENST00000490387 ANP32CO43423 234 aa23■■□□□ 1.27
RAPGEF3-212ENST00000490387 KCNQ2O43526 872 aa23■■□□□ 1.27
RAPGEF3-212ENST00000490387 DIEXFQ68CQ4 756 aaKnown RBP22.99■■□□□ 1.27
RAPGEF3-212ENST00000490387 DDX54Q8TDD1 881 aaKnown RBP22.99■■□□□ 1.27
RAPGEF3-212ENST00000490387 BTAF1O14981 1849 aa22.98■■□□□ 1.27
RAPGEF3-212ENST00000490387 EIF4A2Q14240 407 aaKnown RBP22.97■■□□□ 1.27
RAPGEF3-212ENST00000490387 NCAPD2Q15021 1401 aa22.97■■□□□ 1.27
RAPGEF3-212ENST00000490387 MEGF6O75095 1541 aa22.97■■□□□ 1.27
RAPGEF3-212ENST00000490387 TXNRD1Q16881 649 aa22.96■■□□□ 1.27
RAPGEF3-212ENST00000490387 PROM2Q8N271 834 aa22.96■■□□□ 1.27
RAPGEF3-212ENST00000490387 ANO8Q9HCE9 1232 aaPredicted RBP22.96■■□□□ 1.27
RAPGEF3-212ENST00000490387 SHANK3Q9BYB0 1731 aa22.96■■□□□ 1.27
RAPGEF3-212ENST00000490387 IL13P35225 146 aa22.95■■□□□ 1.26
RAPGEF3-212ENST00000490387 NBPF6Q5VWK0 638 aa22.95■■□□□ 1.26
RAPGEF3-212ENST00000490387 USHBP1Q8N6Y0 703 aa22.95■■□□□ 1.26
RAPGEF3-212ENST00000490387 NBPF4Q96M43 638 aa22.95■■□□□ 1.26
RAPGEF3-212ENST00000490387 ZCRB1Q8TBF4 217 aaKnown RBP22.93■■□□□ 1.26
RAPGEF3-212ENST00000490387 DOT1LQ8TEK3 1739 aa22.93■■□□□ 1.26
RAPGEF3-212ENST00000490387 RAPGEF4Q8WZA2 1011 aa22.92■■□□□ 1.26
RAPGEF3-212ENST00000490387 CFAP53Q96M91 514 aa22.92■■□□□ 1.26
RAPGEF3-212ENST00000490387 IGSF1Q8N6C5 1336 aa22.9■■□□□ 1.26
RAPGEF3-212ENST00000490387 DIAPH1O60610 1272 aaKnown RBP22.9■■□□□ 1.26
RAPGEF3-212ENST00000490387 TATP17735 454 aaPredicted RBP22.9■■□□□ 1.26
RAPGEF3-212ENST00000490387 EYA1Q99502 592 aa22.9■■□□□ 1.26
RAPGEF3-212ENST00000490387 STK32BQ9NY57 414 aa22.9■■□□□ 1.26
RAPGEF3-212ENST00000490387 CASZ1Q86V15 1759 aa22.89■■□□□ 1.26
RAPGEF3-212ENST00000490387 SYTL4Q96C24 671 aaPredicted RBP22.88■■□□□ 1.25
RAPGEF3-212ENST00000490387 SPON1Q9HCB6 807 aa22.88■■□□□ 1.25
RAPGEF3-212ENST00000490387 CCDC184Q52MB2 194 aa22.87■■□□□ 1.25
RAPGEF3-212ENST00000490387 KDRP35968 1356 aa22.86■■□□□ 1.25
RAPGEF3-212ENST00000490387 PRIM1P49642 420 aaKnown RBP22.85■■□□□ 1.25
RAPGEF3-212ENST00000490387 SLC15A2Q16348 729 aa22.85■■□□□ 1.25
RAPGEF3-212ENST00000490387 PAPPAQ13219 1627 aa22.85■■□□□ 1.25
RAPGEF3-212ENST00000490387 PPP1R1BQ9UD71 204 aaPredicted RBP22.84■■□□□ 1.25
RAPGEF3-212ENST00000490387 PCDH11XQ9BZA7 1347 aa22.83■■□□□ 1.25
RAPGEF3-212ENST00000490387 PCDH11YQ9BZA8 1340 aa22.83■■□□□ 1.25
RAPGEF3-212ENST00000490387 PDGFDQ9GZP0 370 aaPredicted RBP22.82■■□□□ 1.24
RAPGEF3-212ENST00000490387 PKD1L3Q7Z443 1732 aa22.82■■□□□ 1.24
RAPGEF3-212ENST00000490387 AEBP1Q8IUX7 1158 aa22.81■■□□□ 1.24
RAPGEF3-212ENST00000490387 MIER1Q8N108 512 aa22.81■■□□□ 1.24
RAPGEF3-212ENST00000490387 NUDCQ9Y266 331 aa22.81■■□□□ 1.24
RAPGEF3-212ENST00000490387 LY75O60449 1722 aa22.8■■□□□ 1.24
RAPGEF3-212ENST00000490387 PLEKHG2Q9H7P9 1386 aa22.8■■□□□ 1.24
RAPGEF3-212ENST00000490387 SLC27A3Q5K4L6 730 aa22.8■■□□□ 1.24
RAPGEF3-212ENST00000490387 ZBTB7AO95365 584 aa22.79■■□□□ 1.24
RAPGEF3-212ENST00000490387 LRRC4BQ9NT99 713 aa22.79■■□□□ 1.24
RAPGEF3-212ENST00000490387 U2SURPO15042 1029 aaKnown RBP22.78■■□□□ 1.24
RAPGEF3-212ENST00000490387 SULT6B1Q6IMI4 303 aa22.78■■□□□ 1.24
RAPGEF3-212ENST00000490387 CCER2I3L3R5 266 aa22.77■■□□□ 1.24
RAPGEF3-212ENST00000490387 MRS2Q9HD23 443 aa22.77■■□□□ 1.24
RAPGEF3-212ENST00000490387 HMOX1P09601 288 aa22.76■■□□□ 1.23
RAPGEF3-212ENST00000490387 ZNF827Q17R98 1081 aa22.76■■□□□ 1.23
RAPGEF3-212ENST00000490387 CYP27B1O15528 508 aa22.75■■□□□ 1.23
RAPGEF3-212ENST00000490387 U2AF1L5P0DN76 240 aaPredicted RBP22.75■■□□□ 1.23
RAPGEF3-212ENST00000490387 U2AF1Q01081 240 aaKnown RBP eCLIP22.75■■□□□ 1.23
RAPGEF3-212ENST00000490387 RSPH6AQ9H0K4 717 aa22.75■■□□□ 1.23
RAPGEF3-212ENST00000490387 SPG7Q9UQ90 795 aa22.75■■□□□ 1.23
RAPGEF3-212ENST00000490387 ATF5Q9Y2D1 282 aaPredicted RBP22.75■■□□□ 1.23
RAPGEF3-212ENST00000490387 ITGB4P16144 1822 aa22.75■■□□□ 1.23
RAPGEF3-212ENST00000490387 QSER1Q2KHR3 1735 aa22.74■■□□□ 1.23
RAPGEF3-212ENST00000490387 TOGARAM1Q9Y4F4 1720 aa22.74■■□□□ 1.23
RAPGEF3-212ENST00000490387 PNISRQ8TF01 805 aaKnown RBP22.74■■□□□ 1.23
RAPGEF3-212ENST00000490387 FCHSD2O94868 740 aa22.73■■□□□ 1.23
RAPGEF3-212ENST00000490387 KCNQ4P56696 695 aa22.73■■□□□ 1.23
RAPGEF3-212ENST00000490387 MTFR1LQ9H019 292 aa22.73■■□□□ 1.23
RAPGEF3-212ENST00000490387 AKT1S1Q96B36 256 aa22.72■■□□□ 1.23
RAPGEF3-212ENST00000490387 CCNL1Q9UK58 526 aaPredicted RBP22.72■■□□□ 1.23
RAPGEF3-212ENST00000490387 TUBGCP6Q96RT7 1819 aa22.72■■□□□ 1.23
RAPGEF3-212ENST00000490387 MPRIPQ6WCQ1 1025 aa22.71■■□□□ 1.23
RAPGEF3-212ENST00000490387 PTGER2P43116 358 aa22.7■■□□□ 1.22
RAPGEF3-212ENST00000490387 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.7■■□□□ 1.22
RAPGEF3-212ENST00000490387 ADAMTS8Q9UP79 889 aa22.7■■□□□ 1.22
RAPGEF3-212ENST00000490387 PRKAR2BP31323 418 aa22.69■■□□□ 1.22
RAPGEF3-212ENST00000490387 WDR43Q15061 677 aaKnown RBP eCLIP22.69■■□□□ 1.22
RAPGEF3-212ENST00000490387 PLEKHF1Q96S99 279 aa22.69■■□□□ 1.22
RAPGEF3-212ENST00000490387 TFCP2L1Q9NZI6 479 aa22.68■■□□□ 1.22
RAPGEF3-212ENST00000490387 C5P01031 1676 aa22.68■■□□□ 1.22
RAPGEF3-212ENST00000490387 PALLDQ8WX93 1383 aa22.67■■□□□ 1.22
RAPGEF3-212ENST00000490387 NKX1-1Q15270 411 aaPredicted RBP22.67■■□□□ 1.22
RAPGEF3-212ENST00000490387 PNPLA7Q6ZV29 1317 aa22.66■■□□□ 1.22
RAPGEF3-212ENST00000490387 IFNL2Q8IZJ0 200 aa22.66■■□□□ 1.22
RAPGEF3-212ENST00000490387 AMOTQ4VCS5 1084 aa22.65■■□□□ 1.22
RAPGEF3-212ENST00000490387 PHACTR3Q96KR7 559 aa22.65■■□□□ 1.22
RAPGEF3-212ENST00000490387 TAF1LQ8IZX4 1826 aa22.65■■□□□ 1.22
RAPGEF3-212ENST00000490387 DCAF8L1A6NGE4 600 aa22.64■■□□□ 1.21
RAPGEF3-212ENST00000490387 PHKG2P15735 406 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms