RNA–Protein interactions for RNA: ENST00000490345.1

GFRA1-205, Transcript of GDNF family receptor alpha 1, humanhuman

TSL 3

Gene GFRA1, Length 355 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1-205ENST00000490345 NUP188Q5SRE5 1749 aa22.08■■□□□ 1.12
GFRA1-205ENST00000490345 NCAPD2Q15021 1401 aa22.07■■□□□ 1.12
GFRA1-205ENST00000490345 TATP17735 454 aaPredicted RBP22.07■■□□□ 1.12
GFRA1-205ENST00000490345 PTF1AQ7RTS3 328 aa22.07■■□□□ 1.12
GFRA1-205ENST00000490345 ZCRB1Q8TBF4 217 aaKnown RBP22.07■■□□□ 1.12
GFRA1-205ENST00000490345 EIF4A2Q14240 407 aaKnown RBP22.06■■□□□ 1.12
GFRA1-205ENST00000490345 ACSBG1Q96GR2 724 aa22.06■■□□□ 1.12
GFRA1-205ENST00000490345 DOT1LQ8TEK3 1739 aa22.06■■□□□ 1.12
GFRA1-205ENST00000490345 CC2D1BQ5T0F9 858 aaKnown RBP22.05■■□□□ 1.12
GFRA1-205ENST00000490345 BTAF1O14981 1849 aa22.05■■□□□ 1.12
GFRA1-205ENST00000490345 PKD1L3Q7Z443 1732 aa22.05■■□□□ 1.12
GFRA1-205ENST00000490345 EYA1Q99502 592 aa22.04■■□□□ 1.12
GFRA1-205ENST00000490345 NPC1L1Q9UHC9 1359 aa22.03■■□□□ 1.12
GFRA1-205ENST00000490345 KCNQ2O43526 872 aa22.03■■□□□ 1.12
GFRA1-205ENST00000490345 PLSCR1O15162 318 aa22.02■■□□□ 1.12
GFRA1-205ENST00000490345 PCDH11XQ9BZA7 1347 aa22.01■■□□□ 1.11
GFRA1-205ENST00000490345 PCDH11YQ9BZA8 1340 aa22.01■■□□□ 1.11
GFRA1-205ENST00000490345 CNGB1Q14028 1251 aaPredicted RBP22■■□□□ 1.11
GFRA1-205ENST00000490345 PSDA5PKW4 1024 aaPredicted RBP21.99■■□□□ 1.11
GFRA1-205ENST00000490345 IGSF1Q8N6C5 1336 aa21.99■■□□□ 1.11
GFRA1-205ENST00000490345 R3HDM1Q15032 1099 aaKnown RBP21.97■■□□□ 1.11
GFRA1-205ENST00000490345 MTHFSP49914 203 aa21.96■■□□□ 1.11
GFRA1-205ENST00000490345 SYTL4Q96C24 671 aaPredicted RBP21.96■■□□□ 1.11
GFRA1-205ENST00000490345 NBPF14Q5TI25 921 aa21.95■■□□□ 1.1
GFRA1-205ENST00000490345 SPG7Q9UQ90 795 aa21.95■■□□□ 1.1
GFRA1-205ENST00000490345 PRIM1P49642 420 aaKnown RBP21.94■■□□□ 1.1
GFRA1-205ENST00000490345 CYP27B1O15528 508 aa21.93■■□□□ 1.1
GFRA1-205ENST00000490345 TXNRD1Q16881 649 aa21.93■■□□□ 1.1
GFRA1-205ENST00000490345 PLEKHG2Q9H7P9 1386 aa21.93■■□□□ 1.1
GFRA1-205ENST00000490345 TOGARAM1Q9Y4F4 1720 aa21.93■■□□□ 1.1
GFRA1-205ENST00000490345 PROM2Q8N271 834 aa21.92■■□□□ 1.1
GFRA1-205ENST00000490345 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.92■■□□□ 1.1
GFRA1-205ENST00000490345 ITGB4P16144 1822 aa21.92■■□□□ 1.1
GFRA1-205ENST00000490345 SRCAPQ6ZRS2 3230 aa21.91■■□□□ 1.1
GFRA1-205ENST00000490345 IL13P35225 146 aa21.91■■□□□ 1.1
GFRA1-205ENST00000490345 AEBP1Q8IUX7 1158 aa21.89■■□□□ 1.09
GFRA1-205ENST00000490345 LY75O60449 1722 aa21.89■■□□□ 1.09
GFRA1-205ENST00000490345 SULT6B1Q6IMI4 303 aa21.88■■□□□ 1.09
GFRA1-205ENST00000490345 ANO8Q9HCE9 1232 aaPredicted RBP21.88■■□□□ 1.09
GFRA1-205ENST00000490345 LRP5O75197 1615 aa21.88■■□□□ 1.09
GFRA1-205ENST00000490345 COL3A1P02461 1466 aaPredicted RBP21.87■■□□□ 1.09
GFRA1-205ENST00000490345 PAPPAQ13219 1627 aa21.87■■□□□ 1.09
GFRA1-205ENST00000490345 KDRP35968 1356 aa21.87■■□□□ 1.09
GFRA1-205ENST00000490345 DIAPH1O60610 1272 aaKnown RBP21.86■■□□□ 1.09
GFRA1-205ENST00000490345 PHKG2P15735 406 aa21.86■■□□□ 1.09
GFRA1-205ENST00000490345 NKX1-1Q15270 411 aaPredicted RBP21.86■■□□□ 1.09
GFRA1-205ENST00000490345 IFNL2Q8IZJ0 200 aa21.86■■□□□ 1.09
GFRA1-205ENST00000490345 PLEKHO1Q53GL0 409 aaPredicted RBP21.85■■□□□ 1.09
GFRA1-205ENST00000490345 ZEB1P37275 1124 aaPredicted RBP21.84■■□□□ 1.09
GFRA1-205ENST00000490345 STK32BQ9NY57 414 aa21.84■■□□□ 1.09
GFRA1-205ENST00000490345 AMOTQ4VCS5 1084 aa21.83■■□□□ 1.09
GFRA1-205ENST00000490345 ZNF530Q6P9A1 599 aaPredicted RBP21.83■■□□□ 1.09
GFRA1-205ENST00000490345 MPRIPQ6WCQ1 1025 aa21.83■■□□□ 1.09
GFRA1-205ENST00000490345 SLC27A3Q5K4L6 730 aa21.82■■□□□ 1.08
GFRA1-205ENST00000490345 HMOX1P09601 288 aa21.81■■□□□ 1.08
GFRA1-205ENST00000490345 CFAP53Q96M91 514 aa21.81■■□□□ 1.08
GFRA1-205ENST00000490345 LRRC4BQ9NT99 713 aa21.81■■□□□ 1.08
GFRA1-205ENST00000490345 CASZ1Q86V15 1759 aa21.81■■□□□ 1.08
GFRA1-205ENST00000490345 PPP2R1AP30153 589 aa21.8■■□□□ 1.08
GFRA1-205ENST00000490345 PALLDQ8WX93 1383 aa21.79■■□□□ 1.08
GFRA1-205ENST00000490345 HSP90AB1P08238 724 aaKnown RBP21.79■■□□□ 1.08
GFRA1-205ENST00000490345 SLC15A2Q16348 729 aa21.79■■□□□ 1.08
GFRA1-205ENST00000490345 C1orf141Q5JVX7 400 aa21.79■■□□□ 1.08
GFRA1-205ENST00000490345 U2SURPO15042 1029 aaKnown RBP21.78■■□□□ 1.08
GFRA1-205ENST00000490345 PIGBQ92521 554 aa21.78■■□□□ 1.08
GFRA1-205ENST00000490345 TMOD3Q9NYL9 352 aa21.78■■□□□ 1.08
GFRA1-205ENST00000490345 CCNL1Q9UK58 526 aaPredicted RBP21.78■■□□□ 1.08
GFRA1-205ENST00000490345 KCNQ4P56696 695 aa21.77■■□□□ 1.08
GFRA1-205ENST00000490345 VIRMAQ69YN4 1812 aaKnown RBP21.77■■□□□ 1.08
GFRA1-205ENST00000490345 C5P01031 1676 aa21.76■■□□□ 1.07
GFRA1-205ENST00000490345 TAF1LQ8IZX4 1826 aa21.76■■□□□ 1.07
GFRA1-205ENST00000490345 TUBGCP6Q96RT7 1819 aa21.76■■□□□ 1.07
GFRA1-205ENST00000490345 KDM6AO15550 1401 aaPredicted RBP21.76■■□□□ 1.07
GFRA1-205ENST00000490345 DDX10Q13206 875 aaKnown RBP21.76■■□□□ 1.07
GFRA1-205ENST00000490345 ZNF827Q17R98 1081 aa21.76■■□□□ 1.07
GFRA1-205ENST00000490345 SMARCC1Q92922 1105 aaPredicted RBP21.76■■□□□ 1.07
GFRA1-205ENST00000490345 DCAF5Q96JK2 942 aa21.76■■□□□ 1.07
GFRA1-205ENST00000490345 SCN11AQ9UI33 1791 aa21.76■■□□□ 1.07
GFRA1-205ENST00000490345 QSER1Q2KHR3 1735 aa21.75■■□□□ 1.07
GFRA1-205ENST00000490345 ERVV-2B6SEH9 535 aa21.73■■□□□ 1.07
GFRA1-205ENST00000490345 PDGFDQ9GZP0 370 aaPredicted RBP21.73■■□□□ 1.07
GFRA1-205ENST00000490345 AKT1S1Q96B36 256 aa21.72■■□□□ 1.07
GFRA1-205ENST00000490345 NUDCQ9Y266 331 aa21.72■■□□□ 1.07
GFRA1-205ENST00000490345 AKAP4Q5JQC9 854 aa21.71■■□□□ 1.07
GFRA1-205ENST00000490345 SPON1Q9HCB6 807 aa21.71■■□□□ 1.07
GFRA1-205ENST00000490345 CABP4P57796 275 aa21.7■■□□□ 1.06
GFRA1-205ENST00000490345 ASAP1Q9ULH1 1129 aa21.7■■□□□ 1.06
GFRA1-205ENST00000490345 MTHFSDQ2M296 383 aaKnown RBP21.69■■□□□ 1.06
GFRA1-205ENST00000490345 TFCP2L1Q9NZI6 479 aa21.69■■□□□ 1.06
GFRA1-205ENST00000490345 ZBTB7AO95365 584 aa21.68■■□□□ 1.06
GFRA1-205ENST00000490345 ATG3Q9NT62 314 aa21.68■■□□□ 1.06
GFRA1-205ENST00000490345 C4BP0C0L5 1744 aa21.67■■□□□ 1.06
GFRA1-205ENST00000490345 U2AF1L5P0DN76 240 aaPredicted RBP21.67■■□□□ 1.06
GFRA1-205ENST00000490345 HMGB2P26583 209 aaKnown RBP21.67■■□□□ 1.06
GFRA1-205ENST00000490345 U2AF1Q01081 240 aaKnown RBP eCLIP21.67■■□□□ 1.06
GFRA1-205ENST00000490345 ADAMTS7Q9UKP4 1686 aa21.66■■□□□ 1.06
GFRA1-205ENST00000490345 LOC102724428A0A0B4J2F2 783 aa21.66■■□□□ 1.06
GFRA1-205ENST00000490345 SIK1P57059 783 aa21.66■■□□□ 1.06
GFRA1-205ENST00000490345 RALBP1Q15311 655 aa21.66■■□□□ 1.06
GFRA1-205ENST00000490345 RSPH6AQ9H0K4 717 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms