RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 POLMQ9NP87 494 aaPredicted RBP8.69□□□□□ -1.02
HMGN1-218ENST00000490032 COG6Q9Y2V7 657 aa8.69□□□□□ -1.02
HMGN1-218ENST00000490032 VAC14Q08AM6 782 aa8.68□□□□□ -1.02
HMGN1-218ENST00000490032 CCDC85AQ96PX6 553 aaPredicted RBP8.68□□□□□ -1.02
HMGN1-218ENST00000490032 GMPRP36959 345 aa8.67□□□□□ -1.02
HMGN1-218ENST00000490032 CYP2U1Q7Z449 544 aa8.67□□□□□ -1.02
HMGN1-218ENST00000490032 OSBPL3Q9H4L5 887 aa8.67□□□□□ -1.02
HMGN1-218ENST00000490032 CHIC2Q9UKJ5 165 aa8.67□□□□□ -1.02
HMGN1-218ENST00000490032 SLC35F4A4IF30 521 aa8.66□□□□□ -1.02
HMGN1-218ENST00000490032 RNF144AP50876 292 aaPredicted RBP8.66□□□□□ -1.02
HMGN1-218ENST00000490032 GPC1P35052 558 aa8.65□□□□□ -1.02
HMGN1-218ENST00000490032 SOX11P35716 441 aa8.65□□□□□ -1.02
HMGN1-218ENST00000490032 INSM1Q01101 510 aaPredicted RBP8.65□□□□□ -1.02
HMGN1-218ENST00000490032 FLIIQ13045 1269 aa8.65□□□□□ -1.02
HMGN1-218ENST00000490032 CDCA7Q9BWT1 371 aaPredicted RBP8.65□□□□□ -1.02
HMGN1-218ENST00000490032 A0A1W2PRU2 124 aa8.64□□□□□ -1.03
HMGN1-218ENST00000490032 CCDC155Q8N6L0 562 aa8.64□□□□□ -1.03
HMGN1-218ENST00000490032 SENP3-EIF4A1A0A087X0R7 540 aa8.63□□□□□ -1.03
HMGN1-218ENST00000490032 CLN3Q13286 438 aa8.63□□□□□ -1.03
HMGN1-218ENST00000490032 TSGA10IPQ3SY00 556 aa8.63□□□□□ -1.03
HMGN1-218ENST00000490032 SLFNL1Q499Z3 407 aa8.63□□□□□ -1.03
HMGN1-218ENST00000490032 LYSMD3Q7Z3D4 306 aa8.63□□□□□ -1.03
HMGN1-218ENST00000490032 RNF135Q8IUD6 432 aa8.62□□□□□ -1.03
HMGN1-218ENST00000490032 NANOS1Q8WY41 292 aaKnown RBP8.62□□□□□ -1.03
HMGN1-218ENST00000490032 POM121Q96HA1 1249 aa8.62□□□□□ -1.03
HMGN1-218ENST00000490032 DOLKQ9UPQ8 538 aa8.62□□□□□ -1.03
HMGN1-218ENST00000490032 MEN1O00255 615 aa8.61□□□□□ -1.03
HMGN1-218ENST00000490032 MYCP01106 439 aaPredicted RBP8.61□□□□□ -1.03
HMGN1-218ENST00000490032 GNRH1P01148 92 aa8.61□□□□□ -1.03
HMGN1-218ENST00000490032 ESF1Q9H501 851 aaKnown RBP8.61□□□□□ -1.03
HMGN1-218ENST00000490032 ITGA6P23229 1130 aa8.6□□□□□ -1.03
HMGN1-218ENST00000490032 LORP23490 312 aaPredicted RBP8.6□□□□□ -1.03
HMGN1-218ENST00000490032 SEMA3FQ13275 785 aa8.6□□□□□ -1.03
HMGN1-218ENST00000490032 GRIP2Q9C0E4 1043 aa8.6□□□□□ -1.03
HMGN1-218ENST00000490032 ARHGEF10LQ9HCE6 1279 aa8.6□□□□□ -1.03
HMGN1-218ENST00000490032 RAD21O60216 631 aa8.59□□□□□ -1.03
HMGN1-218ENST00000490032 UBTFP17480 764 aaKnown RBP8.59□□□□□ -1.03
HMGN1-218ENST00000490032 USP4Q13107 963 aa8.59□□□□□ -1.03
HMGN1-218ENST00000490032 PRICKLE2Q7Z3G6 844 aa8.59□□□□□ -1.03
HMGN1-218ENST00000490032 NLRP3Q96P20 1036 aa8.59□□□□□ -1.03
HMGN1-218ENST00000490032 ALG2Q9H553 416 aa8.59□□□□□ -1.03
HMGN1-218ENST00000490032 MAP7D1Q3KQU3 841 aa8.58□□□□□ -1.04
HMGN1-218ENST00000490032 WWC1Q8IX03 1113 aa8.58□□□□□ -1.04
HMGN1-218ENST00000490032 GPR161Q8N6U8 529 aaKnown RBP8.58□□□□□ -1.04
HMGN1-218ENST00000490032 STK17AQ9UEE5 414 aa8.58□□□□□ -1.04
HMGN1-218ENST00000490032 HRH3Q9Y5N1 445 aa8.58□□□□□ -1.04
HMGN1-218ENST00000490032 SPATA31C2B4DYI2 1134 aa8.57□□□□□ -1.04
HMGN1-218ENST00000490032 IL2RAP01589 272 aa8.57□□□□□ -1.04
HMGN1-218ENST00000490032 PLPP7Q8NBV4 271 aa8.57□□□□□ -1.04
HMGN1-218ENST00000490032 SIRT1Q96EB6 747 aa8.57□□□□□ -1.04
HMGN1-218ENST00000490032 XAGE2Q96GT9 111 aa8.57□□□□□ -1.04
HMGN1-218ENST00000490032 ESYT1Q9BSJ8 1104 aa8.57□□□□□ -1.04
HMGN1-218ENST00000490032 RHOQP17081 205 aa8.56□□□□□ -1.04
HMGN1-218ENST00000490032 OXLD1Q5BKU9 147 aa8.56□□□□□ -1.04
HMGN1-218ENST00000490032 SLC27A3Q5K4L6 730 aa8.56□□□□□ -1.04
HMGN1-218ENST00000490032 CNKSR1Q969H4 720 aa8.56□□□□□ -1.04
HMGN1-218ENST00000490032 RAB6BQ9NRW1 208 aa8.56□□□□□ -1.04
HMGN1-218ENST00000490032 WDR44Q5JSH3 913 aa8.55□□□□□ -1.04
HMGN1-218ENST00000490032 KRT76Q01546 638 aa8.54□□□□□ -1.04
HMGN1-218ENST00000490032 CENPCQ03188 943 aa8.54□□□□□ -1.04
HMGN1-218ENST00000490032 POU4F2Q12837 409 aa8.54□□□□□ -1.04
HMGN1-218ENST00000490032 ESCO1Q5FWF5 840 aa8.54□□□□□ -1.04
HMGN1-218ENST00000490032 NBPF10Q6P3W6 841 aaKnown RBP8.54□□□□□ -1.04
HMGN1-218ENST00000490032 SV2AQ7L0J3 742 aa8.54□□□□□ -1.04
HMGN1-218ENST00000490032 VWA5B2Q8N398 1253 aa8.54□□□□□ -1.04
HMGN1-218ENST00000490032 NBPF15Q8N660 670 aa8.54□□□□□ -1.04
HMGN1-218ENST00000490032 ZSCAN1Q8NBB4 408 aa8.54□□□□□ -1.04
HMGN1-218ENST00000490032 NFATC2IPQ8NCF5 419 aa8.54□□□□□ -1.04
HMGN1-218ENST00000490032 FHDC1Q9C0D6 1143 aaPredicted RBP8.54□□□□□ -1.04
HMGN1-218ENST00000490032 DYRK1BQ9Y463 629 aa8.54□□□□□ -1.04
HMGN1-218ENST00000490032 PIK3CDO00329 1044 aa8.53□□□□□ -1.04
HMGN1-218ENST00000490032 ETNK1Q9HBU6 452 aa8.53□□□□□ -1.04
HMGN1-218ENST00000490032 CUEDC1Q9NWM3 386 aaPredicted RBP8.53□□□□□ -1.04
HMGN1-218ENST00000490032 GMCL1Q96IK5 515 aa8.52□□□□□ -1.05
HMGN1-218ENST00000490032 CDC14CA4D256 554 aa8.51□□□□□ -1.05
HMGN1-218ENST00000490032 POM121CA8CG34 1229 aa8.51□□□□□ -1.05
HMGN1-218ENST00000490032 WASLO00401 505 aaPredicted RBP8.51□□□□□ -1.05
HMGN1-218ENST00000490032 LZTS3O60299 673 aaPredicted RBP8.51□□□□□ -1.05
HMGN1-218ENST00000490032 SCNN1DP51172 638 aa8.51□□□□□ -1.05
HMGN1-218ENST00000490032 TAS1R3Q7RTX0 852 aa8.51□□□□□ -1.05
HMGN1-218ENST00000490032 ADAMTS19Q8TE59 1207 aa8.51□□□□□ -1.05
HMGN1-218ENST00000490032 ZSCAN10Q96SZ4 725 aaPredicted RBP8.51□□□□□ -1.05
HMGN1-218ENST00000490032 COL25A1Q9BXS0 654 aaPredicted RBP8.51□□□□□ -1.05
HMGN1-218ENST00000490032 STAU1O95793 577 aaKnown RBP8.5□□□□□ -1.05
HMGN1-218ENST00000490032 TRIM22Q8IYM9 498 aa8.5□□□□□ -1.05
HMGN1-218ENST00000490032 FNBP4Q8N3X1 1017 aaPredicted RBP8.5□□□□□ -1.05
HMGN1-218ENST00000490032 INHAP05111 366 aa8.49□□□□□ -1.05
HMGN1-218ENST00000490032 SKIP12755 728 aa8.49□□□□□ -1.05
HMGN1-218ENST00000490032 RNFT1Q5M7Z0 435 aa8.49□□□□□ -1.05
HMGN1-218ENST00000490032 CLUAP1Q96AJ1 413 aa8.49□□□□□ -1.05
HMGN1-218ENST00000490032 ZNF837Q96EG3 531 aaPredicted RBP8.49□□□□□ -1.05
HMGN1-218ENST00000490032 CNTNAP3BQ96NU0 1288 aa8.49□□□□□ -1.05
HMGN1-218ENST00000490032 CNTNAP3Q9BZ76 1288 aa8.49□□□□□ -1.05
HMGN1-218ENST00000490032 FAM181BA6NEQ2 426 aa8.48□□□□□ -1.05
HMGN1-218ENST00000490032 GDF10P55107 478 aa8.48□□□□□ -1.05
HMGN1-218ENST00000490032 EML3Q32P44 896 aa8.48□□□□□ -1.05
HMGN1-218ENST00000490032 TIMMDC1Q9NPL8 285 aa8.48□□□□□ -1.05
HMGN1-218ENST00000490032 PCDHGA11Q9Y5H2 935 aa8.48□□□□□ -1.05
HMGN1-218ENST00000490032 DBN1Q16643 649 aa8.47□□□□□ -1.05
HMGN1-218ENST00000490032 PROSER2Q86WR7 435 aaPredicted RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms