RNA–Protein interactions for RNA: ENST00000489857.5

FAM3D-204, Transcript of family with sequence similarity 3 member D, humanhuman

TSL 3

Gene FAM3D, Length 633 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-204ENST00000489857 QSER1Q2KHR3 1735 aa21.14■□□□□ 0.97
FAM3D-204ENST00000489857 SHANK3Q9BYB0 1731 aa21.14■□□□□ 0.97
FAM3D-204ENST00000489857 UTRNP46939 3433 aa21.13■□□□□ 0.97
FAM3D-204ENST00000489857 RGPD2P0DJD1 1756 aa21.13■□□□□ 0.97
FAM3D-204ENST00000489857 RTL1A6NKG5 1358 aa21.12■□□□□ 0.97
FAM3D-204ENST00000489857 RRS1Q15050 365 aaKnown RBP21.12■□□□□ 0.97
FAM3D-204ENST00000489857 TFCP2L1Q9NZI6 479 aa21.12■□□□□ 0.97
FAM3D-204ENST00000489857 NBPF6Q5VWK0 638 aa21.11■□□□□ 0.97
FAM3D-204ENST00000489857 NBPF4Q96M43 638 aa21.11■□□□□ 0.97
FAM3D-204ENST00000489857 COL24A1Q17RW2 1714 aa21.11■□□□□ 0.97
FAM3D-204ENST00000489857 TUBGCP6Q96RT7 1819 aa21.11■□□□□ 0.97
FAM3D-204ENST00000489857 LY75O60449 1722 aa21.1■□□□□ 0.97
FAM3D-204ENST00000489857 FYB1O15117 783 aa21.1■□□□□ 0.97
FAM3D-204ENST00000489857 SLC24A1O60721 1099 aa21.1■□□□□ 0.97
FAM3D-204ENST00000489857 POLD1P28340 1107 aa21.1■□□□□ 0.97
FAM3D-204ENST00000489857 KLHL34Q8N239 644 aa21.1■□□□□ 0.97
FAM3D-204ENST00000489857 USHBP1Q8N6Y0 703 aa21.1■□□□□ 0.97
FAM3D-204ENST00000489857 GGNBP2Q9H3C7 697 aa21.1■□□□□ 0.97
FAM3D-204ENST00000489857 CHD4Q14839 1912 aa21.08■□□□□ 0.97
FAM3D-204ENST00000489857 GPR162Q16538 588 aa21.08■□□□□ 0.97
FAM3D-204ENST00000489857 CCNL1Q9UK58 526 aaPredicted RBP21.08■□□□□ 0.97
FAM3D-204ENST00000489857 NLGN2Q8NFZ4 835 aa21.06■□□□□ 0.96
FAM3D-204ENST00000489857 CGNL1Q0VF96 1302 aa21.05■□□□□ 0.96
FAM3D-204ENST00000489857 USP47Q96K76 1375 aa21.05■□□□□ 0.96
FAM3D-204ENST00000489857 TMF1P82094 1093 aa21.04■□□□□ 0.96
FAM3D-204ENST00000489857 COL23A1Q86Y22 540 aaPredicted RBP21.04■□□□□ 0.96
FAM3D-204ENST00000489857 RAPGEF4Q8WZA2 1011 aa21.04■□□□□ 0.96
FAM3D-204ENST00000489857 SMG6Q86US8 1419 aaKnown RBP21.04■□□□□ 0.96
FAM3D-204ENST00000489857 INSRP06213 1382 aa21.03■□□□□ 0.96
FAM3D-204ENST00000489857 HSP90AB2PQ58FF8 381 aa21.03■□□□□ 0.96
FAM3D-204ENST00000489857 PELP1Q8IZL8 1130 aaKnown RBP21.03■□□□□ 0.96
FAM3D-204ENST00000489857 TATP17735 454 aaPredicted RBP21.02■□□□□ 0.96
FAM3D-204ENST00000489857 C1QTNF8P60827 252 aa21.01■□□□□ 0.95
FAM3D-204ENST00000489857 FLT4P35916 1363 aa21■□□□□ 0.95
FAM3D-204ENST00000489857 MSH5O43196 834 aa21■□□□□ 0.95
FAM3D-204ENST00000489857 PCDH11XQ9BZA7 1347 aa21■□□□□ 0.95
FAM3D-204ENST00000489857 PCDH11YQ9BZA8 1340 aa21■□□□□ 0.95
FAM3D-204ENST00000489857 MSL1Q68DK7 614 aa20.99■□□□□ 0.95
FAM3D-204ENST00000489857 KIF24Q5T7B8 1368 aa20.98■□□□□ 0.95
FAM3D-204ENST00000489857 CYP27B1O15528 508 aa20.98■□□□□ 0.95
FAM3D-204ENST00000489857 PALLDQ8WX93 1383 aa20.97■□□□□ 0.95
FAM3D-204ENST00000489857 KIF20BQ96Q89 1820 aa20.97■□□□□ 0.95
FAM3D-204ENST00000489857 SENP3-EIF4A1A0A087X0R7 540 aa20.97■□□□□ 0.95
FAM3D-204ENST00000489857 YBX3P16989 372 aaKnown RBP eCLIP20.97■□□□□ 0.95
FAM3D-204ENST00000489857 CARD14Q9BXL6 1004 aa20.97■□□□□ 0.95
FAM3D-204ENST00000489857 C5P01031 1676 aa20.96■□□□□ 0.95
FAM3D-204ENST00000489857 MPRIPQ6WCQ1 1025 aa20.96■□□□□ 0.95
FAM3D-204ENST00000489857 EMILIN1Q9Y6C2 1016 aa20.96■□□□□ 0.95
FAM3D-204ENST00000489857 TOGARAM1Q9Y4F4 1720 aa20.95■□□□□ 0.94
FAM3D-204ENST00000489857 CDCA8Q53HL2 280 aa20.94■□□□□ 0.94
FAM3D-204ENST00000489857 NSD3Q9BZ95 1437 aa20.94■□□□□ 0.94
FAM3D-204ENST00000489857 NCAPD2Q15021 1401 aa20.93■□□□□ 0.94
FAM3D-204ENST00000489857 PKD1L3Q7Z443 1732 aa20.92■□□□□ 0.94
FAM3D-204ENST00000489857 GRIN3BO60391 1043 aa20.91■□□□□ 0.94
FAM3D-204ENST00000489857 GIGYF1O75420 1035 aaPredicted RBP20.91■□□□□ 0.94
FAM3D-204ENST00000489857 AMIGO3Q86WK7 504 aa20.91■□□□□ 0.94
FAM3D-204ENST00000489857 TAF1LQ8IZX4 1826 aa20.91■□□□□ 0.94
FAM3D-204ENST00000489857 FLAD1Q8NFF5 587 aa20.91■□□□□ 0.94
FAM3D-204ENST00000489857 PIGBQ92521 554 aa20.9■□□□□ 0.94
FAM3D-204ENST00000489857 SMARCC1Q92922 1105 aaPredicted RBP20.9■□□□□ 0.94
FAM3D-204ENST00000489857 GOLGB1Q14789 3259 aaKnown RBP20.9■□□□□ 0.94
FAM3D-204ENST00000489857 C4BP0C0L5 1744 aa20.9■□□□□ 0.94
FAM3D-204ENST00000489857 NKX1-1Q15270 411 aaPredicted RBP20.89■□□□□ 0.93
FAM3D-204ENST00000489857 CD2APQ9Y5K6 639 aa20.89■□□□□ 0.93
FAM3D-204ENST00000489857 ITGB4P16144 1822 aa20.88■□□□□ 0.93
FAM3D-204ENST00000489857 PPM1GO15355 546 aaPredicted RBP20.88■□□□□ 0.93
FAM3D-204ENST00000489857 HMGB2P26583 209 aaKnown RBP20.88■□□□□ 0.93
FAM3D-204ENST00000489857 SMIM5Q71RC9 77 aa20.88■□□□□ 0.93
FAM3D-204ENST00000489857 AK7Q96M32 723 aa20.87■□□□□ 0.93
FAM3D-204ENST00000489857 ANKRD26Q9UPS8 1709 aa20.87■□□□□ 0.93
FAM3D-204ENST00000489857 WASHC2AQ641Q2 1341 aa20.86■□□□□ 0.93
FAM3D-204ENST00000489857 EYA1Q99502 592 aa20.86■□□□□ 0.93
FAM3D-204ENST00000489857 PHF14O94880 888 aa20.85■□□□□ 0.93
FAM3D-204ENST00000489857 SPG7Q9UQ90 795 aa20.85■□□□□ 0.93
FAM3D-204ENST00000489857 MAP2P11137 1827 aaKnown RBP20.84■□□□□ 0.93
FAM3D-204ENST00000489857 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.84■□□□□ 0.93
FAM3D-204ENST00000489857 ATP10DQ9P241 1426 aa20.84■□□□□ 0.93
FAM3D-204ENST00000489857 LOC102724428A0A0B4J2F2 783 aa20.83■□□□□ 0.93
FAM3D-204ENST00000489857 SIK1P57059 783 aa20.83■□□□□ 0.93
FAM3D-204ENST00000489857 LINC00116Q8NCU8 138 aa20.83■□□□□ 0.93
FAM3D-204ENST00000489857 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.83■□□□□ 0.93
FAM3D-204ENST00000489857 UBR3Q6ZT12 1888 aa20.83■□□□□ 0.92
FAM3D-204ENST00000489857 POLKQ9UBT6 870 aa20.82■□□□□ 0.92
FAM3D-204ENST00000489857 PHKG2P15735 406 aa20.81■□□□□ 0.92
FAM3D-204ENST00000489857 SSFA2P28290 1259 aa20.81■□□□□ 0.92
FAM3D-204ENST00000489857 ITPK1Q13572 414 aa20.81■□□□□ 0.92
FAM3D-204ENST00000489857 TMOD3Q9NYL9 352 aa20.81■□□□□ 0.92
FAM3D-204ENST00000489857 ASAP1Q9ULH1 1129 aa20.81■□□□□ 0.92
FAM3D-204ENST00000489857 TRIM26Q12899 539 aaPredicted RBP20.8■□□□□ 0.92
FAM3D-204ENST00000489857 ADCY9O60503 1353 aa20.8■□□□□ 0.92
FAM3D-204ENST00000489857 IGSF1Q8N6C5 1336 aa20.79■□□□□ 0.92
FAM3D-204ENST00000489857 EIF4A2Q14240 407 aaKnown RBP20.78■□□□□ 0.92
FAM3D-204ENST00000489857 IFNL2Q8IZJ0 200 aa20.78■□□□□ 0.92
FAM3D-204ENST00000489857 WWC3Q9ULE0 1092 aa20.78■□□□□ 0.92
FAM3D-204ENST00000489857 GNPATO15228 680 aa20.77■□□□□ 0.92
FAM3D-204ENST00000489857 ATG3Q9NT62 314 aa20.77■□□□□ 0.92
FAM3D-204ENST00000489857 ATP6V1AP38606 617 aa20.76■□□□□ 0.91
FAM3D-204ENST00000489857 TNNT2P45379 298 aaPredicted RBP20.75■□□□□ 0.91
FAM3D-204ENST00000489857 TIMELESSQ9UNS1 1208 aa20.75■□□□□ 0.91
FAM3D-204ENST00000489857 KDRP35968 1356 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms