RNA–Protein interactions for RNA: ENST00000489695.1

HOXA9-205, Transcript of homeobox A9, humanhuman

TSL 3

Gene HOXA9, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-205ENST00000489695 ZCRB1Q8TBF4 217 aaKnown RBP31.48■■■□□ 2.63
HOXA9-205ENST00000489695 COG3Q96JB2 828 aa31.48■■■□□ 2.63
HOXA9-205ENST00000489695 TESK2Q96S53 571 aa31.46■■■□□ 2.63
HOXA9-205ENST00000489695 LY75O60449 1722 aa31.46■■■□□ 2.63
HOXA9-205ENST00000489695 SENP3-EIF4A1A0A087X0R7 540 aa31.45■■■□□ 2.63
HOXA9-205ENST00000489695 FBLN1P23142 703 aa31.45■■■□□ 2.63
HOXA9-205ENST00000489695 AMPHP49418 695 aa31.45■■■□□ 2.63
HOXA9-205ENST00000489695 KLHL34Q8N239 644 aa31.45■■■□□ 2.63
HOXA9-205ENST00000489695 TUBGCP6Q96RT7 1819 aa31.45■■■□□ 2.62
HOXA9-205ENST00000489695 DOT1LQ8TEK3 1739 aa31.44■■■□□ 2.62
HOXA9-205ENST00000489695 MEGF6O75095 1541 aa31.44■■■□□ 2.62
HOXA9-205ENST00000489695 NLGN2Q8NFZ4 835 aa31.43■■■□□ 2.62
HOXA9-205ENST00000489695 SHANK3Q9BYB0 1731 aa31.43■■■□□ 2.62
HOXA9-205ENST00000489695 CCNL1Q9UK58 526 aaPredicted RBP31.41■■■□□ 2.62
HOXA9-205ENST00000489695 RTL1A6NKG5 1358 aa31.39■■■□□ 2.62
HOXA9-205ENST00000489695 TONSLQ96HA7 1378 aa31.39■■■□□ 2.62
HOXA9-205ENST00000489695 ST20-MTHFSA0A0A6YYL1 179 aa31.38■■■□□ 2.61
HOXA9-205ENST00000489695 SLC24A1O60721 1099 aa31.38■■■□□ 2.61
HOXA9-205ENST00000489695 PELP1Q8IZL8 1130 aaKnown RBP31.38■■■□□ 2.61
HOXA9-205ENST00000489695 CGNL1Q0VF96 1302 aa31.38■■■□□ 2.61
HOXA9-205ENST00000489695 RGPD2P0DJD1 1756 aa31.38■■■□□ 2.61
HOXA9-205ENST00000489695 NBPF6Q5VWK0 638 aa31.37■■■□□ 2.61
HOXA9-205ENST00000489695 COL23A1Q86Y22 540 aaPredicted RBP31.37■■■□□ 2.61
HOXA9-205ENST00000489695 NBPF4Q96M43 638 aa31.37■■■□□ 2.61
HOXA9-205ENST00000489695 USP47Q96K76 1375 aa31.36■■■□□ 2.61
HOXA9-205ENST00000489695 GIGYF1O75420 1035 aaPredicted RBP31.35■■■□□ 2.61
HOXA9-205ENST00000489695 YBX3P16989 372 aaKnown RBP eCLIP31.33■■■□□ 2.61
HOXA9-205ENST00000489695 RRS1Q15050 365 aaKnown RBP31.33■■■□□ 2.61
HOXA9-205ENST00000489695 FYB1O15117 783 aa31.32■■■□□ 2.6
HOXA9-205ENST00000489695 GRIN3BO60391 1043 aa31.32■■■□□ 2.6
HOXA9-205ENST00000489695 CEP350Q5VT06 3117 aa31.32■■■□□ 2.6
HOXA9-205ENST00000489695 MSH5O43196 834 aa31.31■■■□□ 2.6
HOXA9-205ENST00000489695 TRIM26Q12899 539 aaPredicted RBP31.31■■■□□ 2.6
HOXA9-205ENST00000489695 USHBP1Q8N6Y0 703 aa31.3■■■□□ 2.6
HOXA9-205ENST00000489695 RAPGEF4Q8WZA2 1011 aa31.3■■■□□ 2.6
HOXA9-205ENST00000489695 SMG6Q86US8 1419 aaKnown RBP31.27■■■□□ 2.6
HOXA9-205ENST00000489695 HMGB2P26583 209 aaKnown RBP31.27■■■□□ 2.6
HOXA9-205ENST00000489695 GGNBP2Q9H3C7 697 aa31.27■■■□□ 2.6
HOXA9-205ENST00000489695 TATP17735 454 aaPredicted RBP31.26■■■□□ 2.59
HOXA9-205ENST00000489695 MSL1Q68DK7 614 aa31.25■■■□□ 2.59
HOXA9-205ENST00000489695 INSRP06213 1382 aa31.25■■■□□ 2.59
HOXA9-205ENST00000489695 PCDH11XQ9BZA7 1347 aa31.24■■■□□ 2.59
HOXA9-205ENST00000489695 PCDH11YQ9BZA8 1340 aa31.24■■■□□ 2.59
HOXA9-205ENST00000489695 FLAD1Q8NFF5 587 aa31.24■■■□□ 2.59
HOXA9-205ENST00000489695 CD2APQ9Y5K6 639 aa31.24■■■□□ 2.59
HOXA9-205ENST00000489695 C5P01031 1676 aa31.23■■■□□ 2.59
HOXA9-205ENST00000489695 HSP90AB2PQ58FF8 381 aa31.23■■■□□ 2.59
HOXA9-205ENST00000489695 KIF24Q5T7B8 1368 aa31.21■■■□□ 2.59
HOXA9-205ENST00000489695 PALLDQ8WX93 1383 aa31.21■■■□□ 2.59
HOXA9-205ENST00000489695 FLT4P35916 1363 aa31.19■■■□□ 2.58
HOXA9-205ENST00000489695 CYP27B1O15528 508 aa31.19■■■□□ 2.58
HOXA9-205ENST00000489695 TMF1P82094 1093 aa31.18■■■□□ 2.58
HOXA9-205ENST00000489695 MPRIPQ6WCQ1 1025 aa31.18■■■□□ 2.58
HOXA9-205ENST00000489695 TAF1LQ8IZX4 1826 aa31.15■■■□□ 2.58
HOXA9-205ENST00000489695 SMARCC1Q92922 1105 aaPredicted RBP31.15■■■□□ 2.58
HOXA9-205ENST00000489695 ATP10DQ9P241 1426 aa31.15■■■□□ 2.58
HOXA9-205ENST00000489695 AMIGO3Q86WK7 504 aa31.12■■■□□ 2.57
HOXA9-205ENST00000489695 C4BP0C0L5 1744 aa31.12■■■□□ 2.57
HOXA9-205ENST00000489695 NKX1-1Q15270 411 aaPredicted RBP31.11■■■□□ 2.57
HOXA9-205ENST00000489695 TOGARAM1Q9Y4F4 1720 aa31.11■■■□□ 2.57
HOXA9-205ENST00000489695 NCAPD2Q15021 1401 aa31.1■■■□□ 2.57
HOXA9-205ENST00000489695 PIGBQ92521 554 aa31.1■■■□□ 2.57
HOXA9-205ENST00000489695 AK7Q96M32 723 aa31.1■■■□□ 2.57
HOXA9-205ENST00000489695 ADCY9O60503 1353 aa31.09■■■□□ 2.57
HOXA9-205ENST00000489695 KIF20BQ96Q89 1820 aa31.08■■■□□ 2.57
HOXA9-205ENST00000489695 PKD1L3Q7Z443 1732 aa31.08■■■□□ 2.57
HOXA9-205ENST00000489695 CDCA8Q53HL2 280 aa31.08■■■□□ 2.57
HOXA9-205ENST00000489695 CARD14Q9BXL6 1004 aa31.07■■■□□ 2.56
HOXA9-205ENST00000489695 EMILIN1Q9Y6C2 1016 aa31.07■■■□□ 2.56
HOXA9-205ENST00000489695 ITGB4P16144 1822 aa31.07■■■□□ 2.56
HOXA9-205ENST00000489695 NSD3Q9BZ95 1437 aa31.07■■■□□ 2.56
HOXA9-205ENST00000489695 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP31.06■■■□□ 2.56
HOXA9-205ENST00000489695 GPBP1L1Q9HC44 474 aaPredicted RBP31.05■■■□□ 2.56
HOXA9-205ENST00000489695 UBR3Q6ZT12 1888 aa31.04■■■□□ 2.56
HOXA9-205ENST00000489695 SSFA2P28290 1259 aa31.04■■■□□ 2.56
HOXA9-205ENST00000489695 PHF14O94880 888 aa31.03■■■□□ 2.56
HOXA9-205ENST00000489695 SMIM5Q71RC9 77 aa31.03■■■□□ 2.56
HOXA9-205ENST00000489695 SPG7Q9UQ90 795 aa31.03■■■□□ 2.56
HOXA9-205ENST00000489695 IGSF1Q8N6C5 1336 aa31.02■■■□□ 2.56
HOXA9-205ENST00000489695 LOC102724428A0A0B4J2F2 783 aa31.02■■■□□ 2.56
HOXA9-205ENST00000489695 SIK1P57059 783 aa31.02■■■□□ 2.56
HOXA9-205ENST00000489695 IFFO2Q5TF58 517 aa31.02■■■□□ 2.56
HOXA9-205ENST00000489695 MAP2P11137 1827 aaKnown RBP31.01■■■□□ 2.56
HOXA9-205ENST00000489695 LINC00116Q8NCU8 138 aa31.01■■■□□ 2.55
HOXA9-205ENST00000489695 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.01■■■□□ 2.55
HOXA9-205ENST00000489695 WASHC2AQ641Q2 1341 aa30.99■■■□□ 2.55
HOXA9-205ENST00000489695 PPM1GO15355 546 aaPredicted RBP30.97■■■□□ 2.55
HOXA9-205ENST00000489695 EYA1Q99502 592 aa30.97■■■□□ 2.55
HOXA9-205ENST00000489695 ANKRD26Q9UPS8 1709 aa30.97■■■□□ 2.55
HOXA9-205ENST00000489695 TMOD3Q9NYL9 352 aa30.96■■■□□ 2.55
HOXA9-205ENST00000489695 ASAP1Q9ULH1 1129 aa30.96■■■□□ 2.55
HOXA9-205ENST00000489695 ITPK1Q13572 414 aa30.95■■■□□ 2.55
HOXA9-205ENST00000489695 HSPA6P17066 643 aa30.94■■■□□ 2.54
HOXA9-205ENST00000489695 ZNF526Q8TF50 670 aaPredicted RBP30.94■■■□□ 2.54
HOXA9-205ENST00000489695 GNPATO15228 680 aa30.92■■■□□ 2.54
HOXA9-205ENST00000489695 PHKG2P15735 406 aa30.92■■■□□ 2.54
HOXA9-205ENST00000489695 IFNL2Q8IZJ0 200 aa30.92■■■□□ 2.54
HOXA9-205ENST00000489695 WWC3Q9ULE0 1092 aa30.92■■■□□ 2.54
HOXA9-205ENST00000489695 ATP6V1AP38606 617 aa30.91■■■□□ 2.54
HOXA9-205ENST00000489695 ATG3Q9NT62 314 aa30.9■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms