RNA–Protein interactions for RNA: ENST00000489692.1

GGPS1-207, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-207ENST00000489692 SLC15A2Q16348 729 aa16.03■□□□□ 0.16
GGPS1-207ENST00000489692 KIF24Q5T7B8 1368 aa16.02■□□□□ 0.16
GGPS1-207ENST00000489692 WNK3Q9BYP7 1800 aa16.02■□□□□ 0.16
GGPS1-207ENST00000489692 MEGF6O75095 1541 aa16.02■□□□□ 0.15
GGPS1-207ENST00000489692 LRP5O75197 1615 aa16.01■□□□□ 0.15
GGPS1-207ENST00000489692 PDGFDQ9GZP0 370 aaPredicted RBP16.01■□□□□ 0.15
GGPS1-207ENST00000489692 ATF5Q9Y2D1 282 aaPredicted RBP16.01■□□□□ 0.15
GGPS1-207ENST00000489692 PCDH11XQ9BZA7 1347 aa16■□□□□ 0.15
GGPS1-207ENST00000489692 PCDH11YQ9BZA8 1340 aa16■□□□□ 0.15
GGPS1-207ENST00000489692 NUP188Q5SRE5 1749 aa16■□□□□ 0.15
GGPS1-207ENST00000489692 RREB1Q92766 1687 aa16■□□□□ 0.15
GGPS1-207ENST00000489692 MORC1Q86VD1 984 aa16■□□□□ 0.15
GGPS1-207ENST00000489692 POLKQ9UBT6 870 aa16■□□□□ 0.15
GGPS1-207ENST00000489692 KNSTRNQ9Y448 316 aa16■□□□□ 0.15
GGPS1-207ENST00000489692 WASHC2AQ641Q2 1341 aa15.99■□□□□ 0.15
GGPS1-207ENST00000489692 DCAF8L1A6NGE4 600 aa15.99■□□□□ 0.15
GGPS1-207ENST00000489692 KCNQ4P56696 695 aa15.98■□□□□ 0.15
GGPS1-207ENST00000489692 SLC27A3Q5K4L6 730 aa15.98■□□□□ 0.15
GGPS1-207ENST00000489692 EYA1Q99502 592 aa15.97■□□□□ 0.15
GGPS1-207ENST00000489692 LRRC4BQ9NT99 713 aa15.97■□□□□ 0.15
GGPS1-207ENST00000489692 SPG7Q9UQ90 795 aa15.97■□□□□ 0.15
GGPS1-207ENST00000489692 MYOM1P52179 1685 aa15.96■□□□□ 0.15
GGPS1-207ENST00000489692 FAM208AQ9UK61 1670 aaKnown RBP15.96■□□□□ 0.15
GGPS1-207ENST00000489692 DDX10Q13206 875 aaKnown RBP15.96■□□□□ 0.15
GGPS1-207ENST00000489692 ZNF827Q17R98 1081 aa15.96■□□□□ 0.15
GGPS1-207ENST00000489692 MPRIPQ6WCQ1 1025 aa15.96■□□□□ 0.15
GGPS1-207ENST00000489692 TFCP2L1Q9NZI6 479 aa15.96■□□□□ 0.15
GGPS1-207ENST00000489692 CCNL1Q9UK58 526 aaPredicted RBP15.96■□□□□ 0.15
GGPS1-207ENST00000489692 MSH5O43196 834 aa15.95■□□□□ 0.14
GGPS1-207ENST00000489692 EIF4A2Q14240 407 aaKnown RBP15.95■□□□□ 0.14
GGPS1-207ENST00000489692 NHSQ6T4R5 1651 aa15.95■□□□□ 0.14
GGPS1-207ENST00000489692 SBF2Q86WG5 1849 aa15.94■□□□□ 0.14
GGPS1-207ENST00000489692 KIF20BQ96Q89 1820 aa15.94■□□□□ 0.14
GGPS1-207ENST00000489692 CCER2I3L3R5 266 aa15.94■□□□□ 0.14
GGPS1-207ENST00000489692 CYP27B1O15528 508 aa15.94■□□□□ 0.14
GGPS1-207ENST00000489692 CNGB1Q14028 1251 aaPredicted RBP15.94■□□□□ 0.14
GGPS1-207ENST00000489692 MTFR1LQ9H019 292 aa15.94■□□□□ 0.14
GGPS1-207ENST00000489692 NSD2O96028 1365 aa15.93■□□□□ 0.14
GGPS1-207ENST00000489692 KIF7Q2M1P5 1343 aa15.93■□□□□ 0.14
GGPS1-207ENST00000489692 RGPD3A6NKT7 1758 aaPredicted RBP15.92■□□□□ 0.14
GGPS1-207ENST00000489692 RGPD4Q7Z3J3 1758 aa15.92■□□□□ 0.14
GGPS1-207ENST00000489692 YTHDC1Q96MU7 727 aaKnown RBP15.92■□□□□ 0.14
GGPS1-207ENST00000489692 KLHL34Q8N239 644 aa15.91■□□□□ 0.14
GGPS1-207ENST00000489692 IFNL2Q8IZJ0 200 aa15.9■□□□□ 0.14
GGPS1-207ENST00000489692 AKT1S1Q96B36 256 aa15.9■□□□□ 0.14
GGPS1-207ENST00000489692 POLD1P28340 1107 aa15.89■□□□□ 0.13
GGPS1-207ENST00000489692 PTGER2P43116 358 aa15.89■□□□□ 0.13
GGPS1-207ENST00000489692 SMARCC1Q92922 1105 aaPredicted RBP15.89■□□□□ 0.13
GGPS1-207ENST00000489692 TMOD3Q9NYL9 352 aa15.89■□□□□ 0.13
GGPS1-207ENST00000489692 PALLDQ8WX93 1383 aa15.88■□□□□ 0.13
GGPS1-207ENST00000489692 ANP32CO43423 234 aa15.88■□□□□ 0.13
GGPS1-207ENST00000489692 CC2D1BQ5T0F9 858 aaKnown RBP15.88■□□□□ 0.13
GGPS1-207ENST00000489692 ARXQ96QS3 562 aa15.88■□□□□ 0.13
GGPS1-207ENST00000489692 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.88■□□□□ 0.13
GGPS1-207ENST00000489692 BTAF1O14981 1849 aa15.87■□□□□ 0.13
GGPS1-207ENST00000489692 PHKG2P15735 406 aa15.87■□□□□ 0.13
GGPS1-207ENST00000489692 HMGB2P26583 209 aaKnown RBP15.87■□□□□ 0.13
GGPS1-207ENST00000489692 PLEKHO1Q53GL0 409 aaPredicted RBP15.87■□□□□ 0.13
GGPS1-207ENST00000489692 PIGBQ92521 554 aa15.87■□□□□ 0.13
GGPS1-207ENST00000489692 FHDC1Q9C0D6 1143 aaPredicted RBP15.87■□□□□ 0.13
GGPS1-207ENST00000489692 RGPD2P0DJD1 1756 aa15.87■□□□□ 0.13
GGPS1-207ENST00000489692 KAT6BQ8WYB5 2073 aa15.87■□□□□ 0.13
GGPS1-207ENST00000489692 ZNF530Q6P9A1 599 aaPredicted RBP15.86■□□□□ 0.13
GGPS1-207ENST00000489692 SLC16A10Q8TF71 515 aa15.86■□□□□ 0.13
GGPS1-207ENST00000489692 AK7Q96M32 723 aa15.86■□□□□ 0.13
GGPS1-207ENST00000489692 PNPLA7Q6ZV29 1317 aa15.86■□□□□ 0.13
GGPS1-207ENST00000489692 IGSF1Q8N6C5 1336 aa15.86■□□□□ 0.13
GGPS1-207ENST00000489692 NKX1-1Q15270 411 aaPredicted RBP15.85■□□□□ 0.13
GGPS1-207ENST00000489692 AMER1Q5JTC6 1135 aaPredicted RBP15.85■□□□□ 0.13
GGPS1-207ENST00000489692 SULT6B1Q6IMI4 303 aa15.85■□□□□ 0.13
GGPS1-207ENST00000489692 DOT1LQ8TEK3 1739 aa15.85■□□□□ 0.13
GGPS1-207ENST00000489692 HSP90AB1P08238 724 aaKnown RBP15.84■□□□□ 0.13
GGPS1-207ENST00000489692 C1orf141Q5JVX7 400 aa15.84■□□□□ 0.13
GGPS1-207ENST00000489692 AEBP1Q8IUX7 1158 aa15.84■□□□□ 0.13
GGPS1-207ENST00000489692 SYT17Q9BSW7 474 aa15.84■□□□□ 0.13
GGPS1-207ENST00000489692 NCAPD2Q15021 1401 aa15.84■□□□□ 0.13
GGPS1-207ENST00000489692 PHF14O94880 888 aa15.83■□□□□ 0.12
GGPS1-207ENST00000489692 YY1P25490 414 aa15.83■□□□□ 0.12
GGPS1-207ENST00000489692 AMOTQ4VCS5 1084 aa15.83■□□□□ 0.12
GGPS1-207ENST00000489692 MSL1Q68DK7 614 aa15.83■□□□□ 0.12
GGPS1-207ENST00000489692 MTHFSP49914 203 aa15.82■□□□□ 0.12
GGPS1-207ENST00000489692 COL23A1Q86Y22 540 aaPredicted RBP15.82■□□□□ 0.12
GGPS1-207ENST00000489692 PELP1Q8IZL8 1130 aaKnown RBP15.82■□□□□ 0.12
GGPS1-207ENST00000489692 ASAP1Q9ULH1 1129 aa15.82■□□□□ 0.12
GGPS1-207ENST00000489692 GTF3C3Q9Y5Q9 886 aa15.82■□□□□ 0.12
GGPS1-207ENST00000489692 CASZ1Q86V15 1759 aa15.82■□□□□ 0.12
GGPS1-207ENST00000489692 LOC102724428A0A0B4J2F2 783 aa15.81■□□□□ 0.12
GGPS1-207ENST00000489692 SIK1P57059 783 aa15.81■□□□□ 0.12
GGPS1-207ENST00000489692 CABP4P57796 275 aa15.81■□□□□ 0.12
GGPS1-207ENST00000489692 FLAD1Q8NFF5 587 aa15.81■□□□□ 0.12
GGPS1-207ENST00000489692 DCAF5Q96JK2 942 aa15.81■□□□□ 0.12
GGPS1-207ENST00000489692 SGIP1Q9BQI5 828 aa15.81■□□□□ 0.12
GGPS1-207ENST00000489692 RBM42Q9BTD8 480 aaKnown RBP15.81■□□□□ 0.12
GGPS1-207ENST00000489692 PAPPAQ13219 1627 aa15.8■□□□□ 0.12
GGPS1-207ENST00000489692 IL13P35225 146 aa15.8■□□□□ 0.12
GGPS1-207ENST00000489692 ATP6V1AP38606 617 aa15.8■□□□□ 0.12
GGPS1-207ENST00000489692 HMOX1P09601 288 aa15.79■□□□□ 0.12
GGPS1-207ENST00000489692 SHANK3Q9BYB0 1731 aa15.79■□□□□ 0.12
GGPS1-207ENST00000489692 ERVV-2B6SEH9 535 aa15.78■□□□□ 0.12
GGPS1-207ENST00000489692 DIAPH1O60610 1272 aaKnown RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms