RNA–Protein interactions for RNA: ENST00000489614.5

NOD1-208, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 3,098 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-208ENST00000489614 FOXO3O43524 673 aa12.55□□□□□ -0.4
NOD1-208ENST00000489614 ARHGEF25Q86VW2 580 aa12.55□□□□□ -0.4
NOD1-208ENST00000489614 ABTB2Q8N961 1025 aa12.55□□□□□ -0.4
NOD1-208ENST00000489614 ZHX1Q9UKY1 873 aaPredicted RBP12.55□□□□□ -0.4
NOD1-208ENST00000489614 TRIM35Q9UPQ4 493 aa12.55□□□□□ -0.4
NOD1-208ENST00000489614 PSME1Q06323 249 aa12.55□□□□□ -0.4
NOD1-208ENST00000489614 SLFN5Q08AF3 891 aa12.55□□□□□ -0.4
NOD1-208ENST00000489614 DUSP27Q5VZP5 1158 aa12.55□□□□□ -0.4
NOD1-208ENST00000489614 SKAP1Q86WV1 359 aa12.55□□□□□ -0.4
NOD1-208ENST00000489614 CCDC146Q8IYE0 955 aa12.55□□□□□ -0.4
NOD1-208ENST00000489614 NLRP6P59044 892 aa12.54□□□□□ -0.4
NOD1-208ENST00000489614 KCNH5Q8NCM2 988 aa12.54□□□□□ -0.4
NOD1-208ENST00000489614 PAPPAQ13219 1627 aa12.54□□□□□ -0.4
NOD1-208ENST00000489614 APAF1O14727 1248 aa12.54□□□□□ -0.4
NOD1-208ENST00000489614 HSP90AB2PQ58FF8 381 aa12.54□□□□□ -0.4
NOD1-208ENST00000489614 WWC1Q8IX03 1113 aa12.54□□□□□ -0.4
NOD1-208ENST00000489614 IP6K1Q92551 441 aa12.54□□□□□ -0.4
NOD1-208ENST00000489614 DDRGK1Q96HY6 314 aa12.54□□□□□ -0.4
NOD1-208ENST00000489614 PDCL3Q9H2J4 239 aa12.53□□□□□ -0.4
NOD1-208ENST00000489614 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.53□□□□□ -0.4
NOD1-208ENST00000489614 C14orf37Q86TY3 774 aa12.53□□□□□ -0.4
NOD1-208ENST00000489614 TCP11L2Q8N4U5 519 aa12.53□□□□□ -0.4
NOD1-208ENST00000489614 SPINK5Q9NQ38 1064 aaPredicted RBP12.53□□□□□ -0.4
NOD1-208ENST00000489614 WDR63Q8IWG1 891 aa12.53□□□□□ -0.4
NOD1-208ENST00000489614 CLCN1P35523 988 aa12.52□□□□□ -0.4
NOD1-208ENST00000489614 IL16Q14005 1332 aa12.52□□□□□ -0.41
NOD1-208ENST00000489614 TCERG1O14776 1098 aaKnown RBP12.52□□□□□ -0.41
NOD1-208ENST00000489614 TMPOP42166 694 aaKnown RBP12.52□□□□□ -0.41
NOD1-208ENST00000489614 CDCA7LQ96GN5 454 aa12.52□□□□□ -0.41
NOD1-208ENST00000489614 GTF2E1P29083 439 aaPredicted RBP12.51□□□□□ -0.41
NOD1-208ENST00000489614 DDX17Q92841 729 aaKnown RBP12.51□□□□□ -0.41
NOD1-208ENST00000489614 GLI3P10071 1580 aa12.51□□□□□ -0.41
NOD1-208ENST00000489614 GCP02774 474 aa12.51□□□□□ -0.41
NOD1-208ENST00000489614 U2AF1L5P0DN76 240 aaPredicted RBP12.51□□□□□ -0.41
NOD1-208ENST00000489614 U2AF1Q01081 240 aaKnown RBP eCLIP12.51□□□□□ -0.41
NOD1-208ENST00000489614 UBR2Q8IWV8 1755 aa12.5□□□□□ -0.41
NOD1-208ENST00000489614 PHACTR3Q96KR7 559 aa12.5□□□□□ -0.41
NOD1-208ENST00000489614 CACNA1FO60840 1977 aa12.5□□□□□ -0.41
NOD1-208ENST00000489614 OVOS2A0A0G2JMS6 1433 aa12.5□□□□□ -0.41
NOD1-208ENST00000489614 CRB1P82279 1406 aa12.49□□□□□ -0.41
NOD1-208ENST00000489614 MRC1P22897 1456 aa12.49□□□□□ -0.41
NOD1-208ENST00000489614 TOGARAM1Q9Y4F4 1720 aa12.49□□□□□ -0.41
NOD1-208ENST00000489614 PLCD3Q8N3E9 789 aa12.49□□□□□ -0.41
NOD1-208ENST00000489614 COL5A2P05997 1499 aaPredicted RBP12.49□□□□□ -0.41
NOD1-208ENST00000489614 CANXP27824 592 aaKnown RBP12.48□□□□□ -0.41
NOD1-208ENST00000489614 EYA1Q99502 592 aa12.48□□□□□ -0.41
NOD1-208ENST00000489614 XPCQ01831 940 aaPredicted RBP12.48□□□□□ -0.41
NOD1-208ENST00000489614 GOLGA2Q08379 1002 aa12.48□□□□□ -0.41
NOD1-208ENST00000489614 NFE2L2Q16236 605 aa12.48□□□□□ -0.41
NOD1-208ENST00000489614 PANK2Q9BZ23 570 aa12.48□□□□□ -0.41
NOD1-208ENST00000489614 ZNF853P0CG23 659 aa12.48□□□□□ -0.41
NOD1-208ENST00000489614 PRKAR2BP31323 418 aa12.48□□□□□ -0.41
NOD1-208ENST00000489614 AEBP1Q8IUX7 1158 aa12.48□□□□□ -0.41
NOD1-208ENST00000489614 NUTM2GQ5VZR2 741 aa12.47□□□□□ -0.41
NOD1-208ENST00000489614 E9PSI1 815 aa12.47□□□□□ -0.41
NOD1-208ENST00000489614 PRDM10Q9NQV6 1147 aa12.47□□□□□ -0.41
NOD1-208ENST00000489614 AXIN2Q9Y2T1 843 aa12.46□□□□□ -0.41
NOD1-208ENST00000489614 L1TD1Q5T7N2 865 aaKnown RBP12.46□□□□□ -0.41
NOD1-208ENST00000489614 U2SURPO15042 1029 aaKnown RBP12.45□□□□□ -0.42
NOD1-208ENST00000489614 ERBB3P21860 1342 aa12.45□□□□□ -0.42
NOD1-208ENST00000489614 LAMB4A4D0S4 1761 aa12.45□□□□□ -0.42
NOD1-208ENST00000489614 LRP6O75581 1613 aa12.44□□□□□ -0.42
NOD1-208ENST00000489614 GZF1Q9H116 711 aaPredicted RBP12.44□□□□□ -0.42
NOD1-208ENST00000489614 C5P01031 1676 aa12.44□□□□□ -0.42
NOD1-208ENST00000489614 XRCC6P12956 609 aaKnown RBP eCLIP12.44□□□□□ -0.42
NOD1-208ENST00000489614 EXOC6Q8TAG9 804 aa12.44□□□□□ -0.42
NOD1-208ENST00000489614 MEGF6O75095 1541 aa12.44□□□□□ -0.42
NOD1-208ENST00000489614 CEMIPQ8WUJ3 1361 aa12.44□□□□□ -0.42
NOD1-208ENST00000489614 VGLL3A8MV65 326 aa12.43□□□□□ -0.42
NOD1-208ENST00000489614 HMOX1P09601 288 aa12.43□□□□□ -0.42
NOD1-208ENST00000489614 CICQ96RK0 1608 aaPredicted RBP12.43□□□□□ -0.42
NOD1-208ENST00000489614 KIAA0232Q92628 1395 aa12.43□□□□□ -0.42
NOD1-208ENST00000489614 ITGB4P16144 1822 aa12.43□□□□□ -0.42
NOD1-208ENST00000489614 AMPHP49418 695 aa12.43□□□□□ -0.42
NOD1-208ENST00000489614 SULT6B1Q6IMI4 303 aa12.43□□□□□ -0.42
NOD1-208ENST00000489614 NBPF6Q5VWK0 638 aa12.42□□□□□ -0.42
NOD1-208ENST00000489614 NBPF4Q96M43 638 aa12.42□□□□□ -0.42
NOD1-208ENST00000489614 FAM13BQ9NYF5 915 aa12.42□□□□□ -0.42
NOD1-208ENST00000489614 RRP7AQ9Y3A4 280 aaKnown RBP12.42□□□□□ -0.42
NOD1-208ENST00000489614 DISP2A7MBM2 1401 aa12.42□□□□□ -0.42
NOD1-208ENST00000489614 HTATSF1O43719 755 aaKnown RBP12.41□□□□□ -0.42
NOD1-208ENST00000489614 RIPK4P57078 832 aa12.41□□□□□ -0.42
NOD1-208ENST00000489614 MAPK8IP3Q9UPT6 1336 aa12.4□□□□□ -0.42
NOD1-208ENST00000489614 RCAN3Q9UKA8 241 aa12.4□□□□□ -0.42
NOD1-208ENST00000489614 MTHFSDQ2M296 383 aaKnown RBP12.39□□□□□ -0.43
NOD1-208ENST00000489614 SLIT2O94813 1529 aa12.39□□□□□ -0.43
NOD1-208ENST00000489614 CT47B1P0C2W7 299 aaPredicted RBP12.39□□□□□ -0.43
NOD1-208ENST00000489614 ANKRD24Q8TF21 1146 aa12.39□□□□□ -0.43
NOD1-208ENST00000489614 GOLGA6L3A6NEY3 463 aa12.39□□□□□ -0.43
NOD1-208ENST00000489614 MS4A1P11836 297 aa12.39□□□□□ -0.43
NOD1-208ENST00000489614 RRP1P56182 461 aaKnown RBP12.39□□□□□ -0.43
NOD1-208ENST00000489614 IFT57Q9NWB7 429 aa12.39□□□□□ -0.43
NOD1-208ENST00000489614 THSD7AQ9UPZ6 1657 aa12.38□□□□□ -0.43
NOD1-208ENST00000489614 MAP3K5Q99683 1374 aa12.38□□□□□ -0.43
NOD1-208ENST00000489614 ESPNB1AK53 854 aa12.38□□□□□ -0.43
NOD1-208ENST00000489614 TPM2P07951 284 aa12.38□□□□□ -0.43
NOD1-208ENST00000489614 KIAA1211Q6ZU35 1233 aa12.38□□□□□ -0.43
NOD1-208ENST00000489614 BRPF1P55201 1214 aaPredicted RBP12.38□□□□□ -0.43
NOD1-208ENST00000489614 ERBB4Q15303 1308 aa12.37□□□□□ -0.43
NOD1-208ENST00000489614 SOX12O15370 315 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms