RNA–Protein interactions for RNA: ENST00000489583.1

APTX-229, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 397 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-229ENST00000489583 ZNF827Q17R98 1081 aa27.09■■□□□ 1.93
APTX-229ENST00000489583 KLHL34Q8N239 644 aa27.09■■□□□ 1.93
APTX-229ENST00000489583 USP47Q96K76 1375 aa27.09■■□□□ 1.93
APTX-229ENST00000489583 FBLN1P23142 703 aa27.08■■□□□ 1.93
APTX-229ENST00000489583 TRIM26Q12899 539 aaPredicted RBP27.08■■□□□ 1.93
APTX-229ENST00000489583 FYB1O15117 783 aa27.07■■□□□ 1.92
APTX-229ENST00000489583 TATP17735 454 aaPredicted RBP27.07■■□□□ 1.92
APTX-229ENST00000489583 SGIP1Q9BQI5 828 aa27.06■■□□□ 1.92
APTX-229ENST00000489583 MSH5O43196 834 aa27.05■■□□□ 1.92
APTX-229ENST00000489583 AKT1S1Q96B36 256 aa27.05■■□□□ 1.92
APTX-229ENST00000489583 GPR162Q16538 588 aa27.04■■□□□ 1.92
APTX-229ENST00000489583 CCNL1Q9UK58 526 aaPredicted RBP27.04■■□□□ 1.92
APTX-229ENST00000489583 PAPPAQ13219 1627 aa27.04■■□□□ 1.92
APTX-229ENST00000489583 NBPF6Q5VWK0 638 aa27.03■■□□□ 1.92
APTX-229ENST00000489583 NBPF4Q96M43 638 aa27.03■■□□□ 1.92
APTX-229ENST00000489583 USHBP1Q8N6Y0 703 aa27.01■■□□□ 1.91
APTX-229ENST00000489583 MAP3K5Q99683 1374 aa27■■□□□ 1.91
APTX-229ENST00000489583 PCDH11XQ9BZA7 1347 aa27■■□□□ 1.91
APTX-229ENST00000489583 PCDH11YQ9BZA8 1340 aa27■■□□□ 1.91
APTX-229ENST00000489583 FLT4P35916 1363 aa26.99■■□□□ 1.91
APTX-229ENST00000489583 KCNQ4P56696 695 aa26.99■■□□□ 1.91
APTX-229ENST00000489583 PELP1Q8IZL8 1130 aaKnown RBP26.99■■□□□ 1.91
APTX-229ENST00000489583 MEGF6O75095 1541 aa26.99■■□□□ 1.91
APTX-229ENST00000489583 PNPLA7Q6ZV29 1317 aa26.98■■□□□ 1.91
APTX-229ENST00000489583 INSRP06213 1382 aa26.97■■□□□ 1.91
APTX-229ENST00000489583 KIF24Q5T7B8 1368 aa26.97■■□□□ 1.91
APTX-229ENST00000489583 DOT1LQ8TEK3 1739 aa26.97■■□□□ 1.91
APTX-229ENST00000489583 PPM1GO15355 546 aaPredicted RBP26.96■■□□□ 1.91
APTX-229ENST00000489583 HSP90AB2PQ58FF8 381 aa26.96■■□□□ 1.91
APTX-229ENST00000489583 ZNF784Q8NCA9 323 aaPredicted RBP26.96■■□□□ 1.91
APTX-229ENST00000489583 TIMELESSQ9UNS1 1208 aa26.93■■□□□ 1.9
APTX-229ENST00000489583 RGPD2P0DJD1 1756 aa26.92■■□□□ 1.9
APTX-229ENST00000489583 FLAD1Q8NFF5 587 aa26.92■■□□□ 1.9
APTX-229ENST00000489583 NSD2O96028 1365 aa26.92■■□□□ 1.9
APTX-229ENST00000489583 QSER1Q2KHR3 1735 aa26.91■■□□□ 1.9
APTX-229ENST00000489583 MPRIPQ6WCQ1 1025 aa26.91■■□□□ 1.9
APTX-229ENST00000489583 SMARCC1Q92922 1105 aaPredicted RBP26.91■■□□□ 1.9
APTX-229ENST00000489583 SPG7Q9UQ90 795 aa26.9■■□□□ 1.9
APTX-229ENST00000489583 KIF20BQ96Q89 1820 aa26.9■■□□□ 1.9
APTX-229ENST00000489583 NSD3Q9BZ95 1437 aa26.9■■□□□ 1.9
APTX-229ENST00000489583 POLR3GLQ9BT43 218 aa26.89■■□□□ 1.9
APTX-229ENST00000489583 LY75O60449 1722 aa26.87■■□□□ 1.89
APTX-229ENST00000489583 EMILIN1Q9Y6C2 1016 aa26.87■■□□□ 1.89
APTX-229ENST00000489583 PALLDQ8WX93 1383 aa26.85■■□□□ 1.89
APTX-229ENST00000489583 SHANK3Q9BYB0 1731 aa26.85■■□□□ 1.89
APTX-229ENST00000489583 CHD4Q14839 1912 aa26.85■■□□□ 1.89
APTX-229ENST00000489583 GRIN3BO60391 1043 aa26.85■■□□□ 1.89
APTX-229ENST00000489583 COL23A1Q86Y22 540 aaPredicted RBP26.85■■□□□ 1.89
APTX-229ENST00000489583 AK7Q96M32 723 aa26.85■■□□□ 1.89
APTX-229ENST00000489583 CARD14Q9BXL6 1004 aa26.84■■□□□ 1.89
APTX-229ENST00000489583 UTRNP46939 3433 aa26.83■■□□□ 1.88
APTX-229ENST00000489583 CYP27B1O15528 508 aa26.82■■□□□ 1.88
APTX-229ENST00000489583 MSL1Q68DK7 614 aa26.82■■□□□ 1.88
APTX-229ENST00000489583 NLGN2Q8NFZ4 835 aa26.8■■□□□ 1.88
APTX-229ENST00000489583 PCGF6Q9BYE7 350 aa26.79■■□□□ 1.88
APTX-229ENST00000489583 TMOD3Q9NYL9 352 aa26.79■■□□□ 1.88
APTX-229ENST00000489583 WASHC2AQ641Q2 1341 aa26.79■■□□□ 1.88
APTX-229ENST00000489583 CLSPNQ9HAW4 1339 aa26.79■■□□□ 1.88
APTX-229ENST00000489583 TUBGCP6Q96RT7 1819 aa26.78■■□□□ 1.88
APTX-229ENST00000489583 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.77■■□□□ 1.88
APTX-229ENST00000489583 C5P01031 1676 aa26.76■■□□□ 1.87
APTX-229ENST00000489583 GIGYF1O75420 1035 aaPredicted RBP26.75■■□□□ 1.87
APTX-229ENST00000489583 TNNT2P45379 298 aaPredicted RBP26.75■■□□□ 1.87
APTX-229ENST00000489583 IFNL2Q8IZJ0 200 aa26.75■■□□□ 1.87
APTX-229ENST00000489583 PIGBQ92521 554 aa26.75■■□□□ 1.87
APTX-229ENST00000489583 CD2APQ9Y5K6 639 aa26.75■■□□□ 1.87
APTX-229ENST00000489583 SENP3-EIF4A1A0A087X0R7 540 aa26.74■■□□□ 1.87
APTX-229ENST00000489583 PHF14O94880 888 aa26.74■■□□□ 1.87
APTX-229ENST00000489583 C1QTNF8P60827 252 aa26.74■■□□□ 1.87
APTX-229ENST00000489583 NKX1-1Q15270 411 aaPredicted RBP26.74■■□□□ 1.87
APTX-229ENST00000489583 EYA1Q99502 592 aa26.74■■□□□ 1.87
APTX-229ENST00000489583 COL24A1Q17RW2 1714 aa26.73■■□□□ 1.87
APTX-229ENST00000489583 LOC102724428A0A0B4J2F2 783 aa26.71■■□□□ 1.87
APTX-229ENST00000489583 SIK1P57059 783 aa26.71■■□□□ 1.87
APTX-229ENST00000489583 POLKQ9UBT6 870 aa26.71■■□□□ 1.87
APTX-229ENST00000489583 SSFA2P28290 1259 aa26.7■■□□□ 1.86
APTX-229ENST00000489583 EIF4G2P78344 907 aaKnown RBP eCLIP26.7■■□□□ 1.86
APTX-229ENST00000489583 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.69■■□□□ 1.86
APTX-229ENST00000489583 PKD1L3Q7Z443 1732 aa26.69■■□□□ 1.86
APTX-229ENST00000489583 ATP6V1AP38606 617 aa26.68■■□□□ 1.86
APTX-229ENST00000489583 C4BP0C0L5 1744 aa26.68■■□□□ 1.86
APTX-229ENST00000489583 NCAPD2Q15021 1401 aa26.67■■□□□ 1.86
APTX-229ENST00000489583 HSP90AB1P08238 724 aaKnown RBP26.67■■□□□ 1.86
APTX-229ENST00000489583 PHKG2P15735 406 aa26.67■■□□□ 1.86
APTX-229ENST00000489583 YBX3P16989 372 aaKnown RBP eCLIP26.67■■□□□ 1.86
APTX-229ENST00000489583 MAP2P11137 1827 aaKnown RBP26.65■■□□□ 1.86
APTX-229ENST00000489583 ITGB4P16144 1822 aa26.65■■□□□ 1.86
APTX-229ENST00000489583 GNPATO15228 680 aa26.65■■□□□ 1.86
APTX-229ENST00000489583 EIF4A2Q14240 407 aaKnown RBP26.65■■□□□ 1.86
APTX-229ENST00000489583 PLEKHO1Q53GL0 409 aaPredicted RBP26.64■■□□□ 1.86
APTX-229ENST00000489583 ASAP1Q9ULH1 1129 aa26.64■■□□□ 1.86
APTX-229ENST00000489583 TAF1LQ8IZX4 1826 aa26.64■■□□□ 1.85
APTX-229ENST00000489583 PLEKHG2Q9H7P9 1386 aa26.63■■□□□ 1.85
APTX-229ENST00000489583 ANKRD26Q9UPS8 1709 aa26.63■■□□□ 1.85
APTX-229ENST00000489583 GOLGB1Q14789 3259 aaKnown RBP26.63■■□□□ 1.85
APTX-229ENST00000489583 TOGARAM1Q9Y4F4 1720 aa26.62■■□□□ 1.85
APTX-229ENST00000489583 LINC00116Q8NCU8 138 aa26.62■■□□□ 1.85
APTX-229ENST00000489583 RBM42Q9BTD8 480 aaKnown RBP26.61■■□□□ 1.85
APTX-229ENST00000489583 PANK3Q9H999 370 aa26.61■■□□□ 1.85
APTX-229ENST00000489583 ERVV-2B6SEH9 535 aa26.6■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms