RNA–Protein interactions for RNA: ENST00000489555.1

PRUNE2-213, Transcript of prune homolog 2, humanhuman

TSL 3

Gene PRUNE2, Length 635 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2-213ENST00000489555 UBR3Q6ZT12 1888 aa10.7□□□□□ -0.7
PRUNE2-213ENST00000489555 NSD2O96028 1365 aa10.7□□□□□ -0.7
PRUNE2-213ENST00000489555 ANKRD24Q8TF21 1146 aa10.7□□□□□ -0.7
PRUNE2-213ENST00000489555 CD163L1Q9NR16 1453 aa10.69□□□□□ -0.7
PRUNE2-213ENST00000489555 EDC4Q6P2E9 1401 aaKnown RBP10.69□□□□□ -0.7
PRUNE2-213ENST00000489555 KIF13BQ9NQT8 1826 aa10.69□□□□□ -0.7
PRUNE2-213ENST00000489555 PCNTO95613 3336 aa10.68□□□□□ -0.7
PRUNE2-213ENST00000489555 ITGB4P16144 1822 aa10.68□□□□□ -0.7
PRUNE2-213ENST00000489555 FLAD1Q8NFF5 587 aa10.68□□□□□ -0.7
PRUNE2-213ENST00000489555 CCNL1Q9UK58 526 aaPredicted RBP10.67□□□□□ -0.7
PRUNE2-213ENST00000489555 C4BP0C0L5 1744 aa10.67□□□□□ -0.7
PRUNE2-213ENST00000489555 TOGARAM1Q9Y4F4 1720 aa10.67□□□□□ -0.7
PRUNE2-213ENST00000489555 USP47Q96K76 1375 aa10.66□□□□□ -0.7
PRUNE2-213ENST00000489555 CGNL1Q0VF96 1302 aa10.66□□□□□ -0.7
PRUNE2-213ENST00000489555 COL23A1Q86Y22 540 aaPredicted RBP10.66□□□□□ -0.7
PRUNE2-213ENST00000489555 DDX54Q8TDD1 881 aaKnown RBP10.66□□□□□ -0.7
PRUNE2-213ENST00000489555 IP6K1Q92551 441 aa10.66□□□□□ -0.7
PRUNE2-213ENST00000489555 NSD3Q9BZ95 1437 aa10.66□□□□□ -0.7
PRUNE2-213ENST00000489555 WDR90Q96KV7 1748 aa10.65□□□□□ -0.7
PRUNE2-213ENST00000489555 PRIM1P49642 420 aaKnown RBP10.65□□□□□ -0.7
PRUNE2-213ENST00000489555 APLP1P51693 650 aa10.65□□□□□ -0.7
PRUNE2-213ENST00000489555 BRCA1P38398 1863 aaKnown RBP10.65□□□□□ -0.7
PRUNE2-213ENST00000489555 ROCK2O75116 1388 aaKnown RBP10.65□□□□□ -0.71
PRUNE2-213ENST00000489555 MAP2P11137 1827 aaKnown RBP10.64□□□□□ -0.71
PRUNE2-213ENST00000489555 NME9Q86XW9 330 aa10.64□□□□□ -0.71
PRUNE2-213ENST00000489555 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.64□□□□□ -0.71
PRUNE2-213ENST00000489555 SYTL4Q96C24 671 aaPredicted RBP10.64□□□□□ -0.71
PRUNE2-213ENST00000489555 RTL1A6NKG5 1358 aa10.64□□□□□ -0.71
PRUNE2-213ENST00000489555 MEGF6O75095 1541 aa10.63□□□□□ -0.71
PRUNE2-213ENST00000489555 HDGFL2Q7Z4V5 671 aaPredicted RBP10.63□□□□□ -0.71
PRUNE2-213ENST00000489555 ZCRB1Q8TBF4 217 aaKnown RBP10.63□□□□□ -0.71
PRUNE2-213ENST00000489555 PUS7Q96PZ0 661 aaKnown RBP10.63□□□□□ -0.71
PRUNE2-213ENST00000489555 PKD1L3Q7Z443 1732 aa10.63□□□□□ -0.71
PRUNE2-213ENST00000489555 KIAA1551Q9HCM1 1747 aa10.63□□□□□ -0.71
PRUNE2-213ENST00000489555 ARFGEF1Q9Y6D6 1849 aa10.63□□□□□ -0.71
PRUNE2-213ENST00000489555 KIF3CO14782 793 aa10.62□□□□□ -0.71
PRUNE2-213ENST00000489555 KCNQ4P56696 695 aa10.62□□□□□ -0.71
PRUNE2-213ENST00000489555 TERF2IPQ9NYB0 399 aa10.62□□□□□ -0.71
PRUNE2-213ENST00000489555 L3MBTL2Q969R5 705 aa10.61□□□□□ -0.71
PRUNE2-213ENST00000489555 A0A1W2PP64 1363 aa10.61□□□□□ -0.71
PRUNE2-213ENST00000489555 IGSF1Q8N6C5 1336 aa10.6□□□□□ -0.71
PRUNE2-213ENST00000489555 TOMM70O94826 608 aa10.6□□□□□ -0.71
PRUNE2-213ENST00000489555 MSL1Q68DK7 614 aa10.6□□□□□ -0.71
PRUNE2-213ENST00000489555 ZNF831Q5JPB2 1677 aa10.6□□□□□ -0.71
PRUNE2-213ENST00000489555 N4BP2Q86UW6 1770 aaPredicted RBP10.6□□□□□ -0.71
PRUNE2-213ENST00000489555 SMG6Q86US8 1419 aaKnown RBP10.59□□□□□ -0.71
PRUNE2-213ENST00000489555 HOXC9P31274 260 aa10.59□□□□□ -0.71
PRUNE2-213ENST00000489555 DNAJC5GQ8N7S2 189 aa10.59□□□□□ -0.71
PRUNE2-213ENST00000489555 ZNF526Q8TF50 670 aaPredicted RBP10.59□□□□□ -0.71
PRUNE2-213ENST00000489555 PALLDQ8WX93 1383 aa10.59□□□□□ -0.71
PRUNE2-213ENST00000489555 MAP3K19Q56UN5 1328 aa10.58□□□□□ -0.71
PRUNE2-213ENST00000489555 PCDH11XQ9BZA7 1347 aa10.58□□□□□ -0.71
PRUNE2-213ENST00000489555 PCDH11YQ9BZA8 1340 aa10.58□□□□□ -0.71
PRUNE2-213ENST00000489555 TNRC6CQ9HCJ0 1690 aaKnown RBP10.58□□□□□ -0.72
PRUNE2-213ENST00000489555 SSFA2P28290 1259 aa10.58□□□□□ -0.72
PRUNE2-213ENST00000489555 SMARCC1Q92922 1105 aaPredicted RBP10.58□□□□□ -0.72
PRUNE2-213ENST00000489555 SBF1O95248 1867 aa10.57□□□□□ -0.72
PRUNE2-213ENST00000489555 KIF24Q5T7B8 1368 aa10.57□□□□□ -0.72
PRUNE2-213ENST00000489555 KIF20BQ96Q89 1820 aa10.57□□□□□ -0.72
PRUNE2-213ENST00000489555 TMC1Q8TDI8 760 aa10.57□□□□□ -0.72
PRUNE2-213ENST00000489555 RAPGEF4Q8WZA2 1011 aa10.57□□□□□ -0.72
PRUNE2-213ENST00000489555 LTV1Q96GA3 475 aaPredicted RBP10.57□□□□□ -0.72
PRUNE2-213ENST00000489555 AMPHP49418 695 aa10.56□□□□□ -0.72
PRUNE2-213ENST00000489555 COG3Q96JB2 828 aa10.56□□□□□ -0.72
PRUNE2-213ENST00000489555 AK7Q96M32 723 aa10.56□□□□□ -0.72
PRUNE2-213ENST00000489555 SLC12A5Q9H2X9 1139 aa10.56□□□□□ -0.72
PRUNE2-213ENST00000489555 C10orf71Q711Q0 1435 aa10.56□□□□□ -0.72
PRUNE2-213ENST00000489555 ANKRD26Q9UPS8 1709 aa10.55□□□□□ -0.72
PRUNE2-213ENST00000489555 PXDNLA1KZ92 1463 aa10.55□□□□□ -0.72
PRUNE2-213ENST00000489555 PLEKHG2Q9H7P9 1386 aa10.55□□□□□ -0.72
PRUNE2-213ENST00000489555 SLC24A1O60721 1099 aa10.55□□□□□ -0.72
PRUNE2-213ENST00000489555 JMYQ8N9B5 988 aa10.55□□□□□ -0.72
PRUNE2-213ENST00000489555 RBM46Q8TBY0 533 aaKnown RBP10.55□□□□□ -0.72
PRUNE2-213ENST00000489555 COL5A3P25940 1745 aaPredicted RBP10.55□□□□□ -0.72
PRUNE2-213ENST00000489555 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.54□□□□□ -0.72
PRUNE2-213ENST00000489555 C4AP0C0L4 1744 aa10.54□□□□□ -0.72
PRUNE2-213ENST00000489555 TATP17735 454 aaPredicted RBP10.54□□□□□ -0.72
PRUNE2-213ENST00000489555 TGFB2P61812 414 aa10.54□□□□□ -0.72
PRUNE2-213ENST00000489555 NCAPD2Q15021 1401 aa10.54□□□□□ -0.72
PRUNE2-213ENST00000489555 NBPF6Q5VWK0 638 aa10.54□□□□□ -0.72
PRUNE2-213ENST00000489555 NBPF4Q96M43 638 aa10.54□□□□□ -0.72
PRUNE2-213ENST00000489555 INSRP06213 1382 aa10.53□□□□□ -0.72
PRUNE2-213ENST00000489555 FSTL1Q12841 308 aa10.53□□□□□ -0.72
PRUNE2-213ENST00000489555 KLRG1Q96E93 195 aa10.53□□□□□ -0.72
PRUNE2-213ENST00000489555 NKX1-1Q15270 411 aaPredicted RBP10.52□□□□□ -0.73
PRUNE2-213ENST00000489555 MPRIPQ6WCQ1 1025 aa10.52□□□□□ -0.73
PRUNE2-213ENST00000489555 CARD11Q9BXL7 1154 aa10.52□□□□□ -0.73
PRUNE2-213ENST00000489555 FLT4P35916 1363 aa10.52□□□□□ -0.73
PRUNE2-213ENST00000489555 AMIGO3Q86WK7 504 aa10.51□□□□□ -0.73
PRUNE2-213ENST00000489555 MYH14Q7Z406 1995 aaKnown RBP10.5□□□□□ -0.73
PRUNE2-213ENST00000489555 LOC102724428A0A0B4J2F2 783 aa10.5□□□□□ -0.73
PRUNE2-213ENST00000489555 CYP27B1O15528 508 aa10.5□□□□□ -0.73
PRUNE2-213ENST00000489555 PHF14O94880 888 aa10.5□□□□□ -0.73
PRUNE2-213ENST00000489555 PRELPP51888 382 aa10.5□□□□□ -0.73
PRUNE2-213ENST00000489555 SIK1P57059 783 aa10.5□□□□□ -0.73
PRUNE2-213ENST00000489555 PIAS4Q8N2W9 510 aaPredicted RBP10.5□□□□□ -0.73
PRUNE2-213ENST00000489555 MMP10P09238 476 aa10.49□□□□□ -0.73
PRUNE2-213ENST00000489555 ADRA2BP18089 450 aa10.49□□□□□ -0.73
PRUNE2-213ENST00000489555 C16orf71Q8IYS4 520 aaPredicted RBP10.49□□□□□ -0.73
PRUNE2-213ENST00000489555 NLGN1Q8N2Q7 840 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms