RNA–Protein interactions for RNA: ENST00000489541.1

C1S-214, Transcript of complement C1s, humanhuman

TSL 3

Gene C1S, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1S-214ENST00000489541 GGNBP2Q9H3C7 697 aa23.3■■□□□ 1.32
C1S-214ENST00000489541 TUBGCP6Q96RT7 1819 aa23.3■■□□□ 1.32
C1S-214ENST00000489541 QSER1Q2KHR3 1735 aa23.3■■□□□ 1.32
C1S-214ENST00000489541 LY75O60449 1722 aa23.29■■□□□ 1.32
C1S-214ENST00000489541 RTL1A6NKG5 1358 aa23.28■■□□□ 1.32
C1S-214ENST00000489541 SLC24A1O60721 1099 aa23.28■■□□□ 1.32
C1S-214ENST00000489541 SLC27A3Q5K4L6 730 aa23.28■■□□□ 1.32
C1S-214ENST00000489541 ZCRB1Q8TBF4 217 aaKnown RBP23.28■■□□□ 1.32
C1S-214ENST00000489541 ARXQ96QS3 562 aa23.28■■□□□ 1.32
C1S-214ENST00000489541 COL24A1Q17RW2 1714 aa23.28■■□□□ 1.32
C1S-214ENST00000489541 PNPLA7Q6ZV29 1317 aa23.27■■□□□ 1.32
C1S-214ENST00000489541 TMF1P82094 1093 aa23.26■■□□□ 1.31
C1S-214ENST00000489541 USHBP1Q8N6Y0 703 aa23.26■■□□□ 1.31
C1S-214ENST00000489541 SYTL4Q96C24 671 aaPredicted RBP23.26■■□□□ 1.31
C1S-214ENST00000489541 MAP3K5Q99683 1374 aa23.26■■□□□ 1.31
C1S-214ENST00000489541 KIF20BQ96Q89 1820 aa23.24■■□□□ 1.31
C1S-214ENST00000489541 HSP90AB2PQ58FF8 381 aa23.23■■□□□ 1.31
C1S-214ENST00000489541 CARD14Q9BXL6 1004 aa23.22■■□□□ 1.31
C1S-214ENST00000489541 CHD4Q14839 1912 aa23.21■■□□□ 1.31
C1S-214ENST00000489541 INSRP06213 1382 aa23.2■■□□□ 1.3
C1S-214ENST00000489541 SLC16A10Q8TF71 515 aa23.2■■□□□ 1.3
C1S-214ENST00000489541 TRIM26Q12899 539 aaPredicted RBP23.19■■□□□ 1.3
C1S-214ENST00000489541 ZNF784Q8NCA9 323 aaPredicted RBP23.19■■□□□ 1.3
C1S-214ENST00000489541 TFCP2L1Q9NZI6 479 aa23.19■■□□□ 1.3
C1S-214ENST00000489541 CGNL1Q0VF96 1302 aa23.18■■□□□ 1.3
C1S-214ENST00000489541 GOLGB1Q14789 3259 aaKnown RBP23.18■■□□□ 1.3
C1S-214ENST00000489541 CCNL1Q9UK58 526 aaPredicted RBP23.17■■□□□ 1.3
C1S-214ENST00000489541 SMG6Q86US8 1419 aaKnown RBP23.16■■□□□ 1.3
C1S-214ENST00000489541 FLT4P35916 1363 aa23.16■■□□□ 1.3
C1S-214ENST00000489541 RAPGEF4Q8WZA2 1011 aa23.16■■□□□ 1.3
C1S-214ENST00000489541 EMILIN1Q9Y6C2 1016 aa23.15■■□□□ 1.3
C1S-214ENST00000489541 NSD3Q9BZ95 1437 aa23.15■■□□□ 1.3
C1S-214ENST00000489541 KIF24Q5T7B8 1368 aa23.14■■□□□ 1.3
C1S-214ENST00000489541 TOGARAM1Q9Y4F4 1720 aa23.14■■□□□ 1.3
C1S-214ENST00000489541 TATP17735 454 aaPredicted RBP23.14■■□□□ 1.29
C1S-214ENST00000489541 COL23A1Q86Y22 540 aaPredicted RBP23.14■■□□□ 1.29
C1S-214ENST00000489541 CYP27B1O15528 508 aa23.13■■□□□ 1.29
C1S-214ENST00000489541 CDCA8Q53HL2 280 aa23.13■■□□□ 1.29
C1S-214ENST00000489541 POLD1P28340 1107 aa23.12■■□□□ 1.29
C1S-214ENST00000489541 NCAPD2Q15021 1401 aa23.12■■□□□ 1.29
C1S-214ENST00000489541 PCDH11XQ9BZA7 1347 aa23.11■■□□□ 1.29
C1S-214ENST00000489541 PCDH11YQ9BZA8 1340 aa23.11■■□□□ 1.29
C1S-214ENST00000489541 PKD1L3Q7Z443 1732 aa23.11■■□□□ 1.29
C1S-214ENST00000489541 ITGB4P16144 1822 aa23.11■■□□□ 1.29
C1S-214ENST00000489541 TAF1LQ8IZX4 1826 aa23.11■■□□□ 1.29
C1S-214ENST00000489541 KLHL34Q8N239 644 aa23.11■■□□□ 1.29
C1S-214ENST00000489541 NLGN2Q8NFZ4 835 aa23.11■■□□□ 1.29
C1S-214ENST00000489541 C5P01031 1676 aa23.11■■□□□ 1.29
C1S-214ENST00000489541 ANKRD26Q9UPS8 1709 aa23.11■■□□□ 1.29
C1S-214ENST00000489541 GPR162Q16538 588 aa23.08■■□□□ 1.29
C1S-214ENST00000489541 PALLDQ8WX93 1383 aa23.08■■□□□ 1.29
C1S-214ENST00000489541 MAP2P11137 1827 aaKnown RBP23.08■■□□□ 1.28
C1S-214ENST00000489541 MPRIPQ6WCQ1 1025 aa23.07■■□□□ 1.28
C1S-214ENST00000489541 AMIGO3Q86WK7 504 aa23.06■■□□□ 1.28
C1S-214ENST00000489541 MSL1Q68DK7 614 aa23.05■■□□□ 1.28
C1S-214ENST00000489541 WASHC2AQ641Q2 1341 aa23.05■■□□□ 1.28
C1S-214ENST00000489541 MSH5O43196 834 aa23.04■■□□□ 1.28
C1S-214ENST00000489541 EYA1Q99502 592 aa23.04■■□□□ 1.28
C1S-214ENST00000489541 PPM1GO15355 546 aaPredicted RBP23.03■■□□□ 1.28
C1S-214ENST00000489541 NKX1-1Q15270 411 aaPredicted RBP23.03■■□□□ 1.28
C1S-214ENST00000489541 PIGBQ92521 554 aa23.03■■□□□ 1.28
C1S-214ENST00000489541 C4BP0C0L5 1744 aa23.02■■□□□ 1.28
C1S-214ENST00000489541 YBX3P16989 372 aaKnown RBP eCLIP23.02■■□□□ 1.28
C1S-214ENST00000489541 POLKQ9UBT6 870 aa23.02■■□□□ 1.28
C1S-214ENST00000489541 TIMELESSQ9UNS1 1208 aa23.02■■□□□ 1.28
C1S-214ENST00000489541 SMIM5Q71RC9 77 aa23.01■■□□□ 1.27
C1S-214ENST00000489541 PELP1Q8IZL8 1130 aaKnown RBP23.01■■□□□ 1.27
C1S-214ENST00000489541 UBR3Q6ZT12 1888 aa23■■□□□ 1.27
C1S-214ENST00000489541 SMARCC1Q92922 1105 aaPredicted RBP22.97■■□□□ 1.27
C1S-214ENST00000489541 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.96■■□□□ 1.27
C1S-214ENST00000489541 SPG7Q9UQ90 795 aa22.96■■□□□ 1.27
C1S-214ENST00000489541 EIF4A2Q14240 407 aaKnown RBP22.95■■□□□ 1.26
C1S-214ENST00000489541 LINC00116Q8NCU8 138 aa22.95■■□□□ 1.26
C1S-214ENST00000489541 FLAD1Q8NFF5 587 aa22.95■■□□□ 1.26
C1S-214ENST00000489541 LOC102724428A0A0B4J2F2 783 aa22.94■■□□□ 1.26
C1S-214ENST00000489541 PHKG2P15735 406 aa22.94■■□□□ 1.26
C1S-214ENST00000489541 SIK1P57059 783 aa22.94■■□□□ 1.26
C1S-214ENST00000489541 C1QTNF8P60827 252 aa22.94■■□□□ 1.26
C1S-214ENST00000489541 ASAP1Q9ULH1 1129 aa22.94■■□□□ 1.26
C1S-214ENST00000489541 CLSPNQ9HAW4 1339 aa22.93■■□□□ 1.26
C1S-214ENST00000489541 TNNT2P45379 298 aaPredicted RBP22.93■■□□□ 1.26
C1S-214ENST00000489541 ITPK1Q13572 414 aa22.93■■□□□ 1.26
C1S-214ENST00000489541 AK7Q96M32 723 aa22.93■■□□□ 1.26
C1S-214ENST00000489541 POLR3GLQ9BT43 218 aa22.93■■□□□ 1.26
C1S-214ENST00000489541 CD2APQ9Y5K6 639 aa22.93■■□□□ 1.26
C1S-214ENST00000489541 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.92■■□□□ 1.26
C1S-214ENST00000489541 PHF14O94880 888 aa22.92■■□□□ 1.26
C1S-214ENST00000489541 PCGF6Q9BYE7 350 aa22.92■■□□□ 1.26
C1S-214ENST00000489541 IFNL2Q8IZJ0 200 aa22.91■■□□□ 1.26
C1S-214ENST00000489541 TMOD3Q9NYL9 352 aa22.91■■□□□ 1.26
C1S-214ENST00000489541 GRIN3BO60391 1043 aa22.9■■□□□ 1.26
C1S-214ENST00000489541 ATG3Q9NT62 314 aa22.9■■□□□ 1.26
C1S-214ENST00000489541 HMGB2P26583 209 aaKnown RBP22.89■■□□□ 1.25
C1S-214ENST00000489541 IGSF1Q8N6C5 1336 aa22.88■■□□□ 1.25
C1S-214ENST00000489541 HSPA5P11021 654 aaKnown RBP22.88■■□□□ 1.25
C1S-214ENST00000489541 PANK3Q9H999 370 aa22.88■■□□□ 1.25
C1S-214ENST00000489541 SSFA2P28290 1259 aa22.87■■□□□ 1.25
C1S-214ENST00000489541 SLC4A9Q96Q91 983 aa22.87■■□□□ 1.25
C1S-214ENST00000489541 KDRP35968 1356 aa22.87■■□□□ 1.25
C1S-214ENST00000489541 SENP3-EIF4A1A0A087X0R7 540 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms