RNA–Protein interactions for RNA: ENST00000489283.5

PLS3-207, Transcript of plastin 3, humanhuman

TSL 1 (best)

Gene PLS3, Length 926 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLS3-207ENST00000489283 NBPF4Q96M43 638 aa19.51■□□□□ 0.71
PLS3-207ENST00000489283 PDGFDQ9GZP0 370 aaPredicted RBP19.51■□□□□ 0.71
PLS3-207ENST00000489283 CCER1Q8TC90 406 aaPredicted RBP19.5■□□□□ 0.71
PLS3-207ENST00000489283 TUBGCP6Q96RT7 1819 aa19.5■□□□□ 0.71
PLS3-207ENST00000489283 QSER1Q2KHR3 1735 aa19.5■□□□□ 0.71
PLS3-207ENST00000489283 PKD1L3Q7Z443 1732 aa19.49■□□□□ 0.71
PLS3-207ENST00000489283 SLC15A2Q16348 729 aa19.49■□□□□ 0.71
PLS3-207ENST00000489283 HSP90AB2PQ58FF8 381 aa19.49■□□□□ 0.71
PLS3-207ENST00000489283 PPP1R1BQ9UD71 204 aaPredicted RBP19.49■□□□□ 0.71
PLS3-207ENST00000489283 ZCRB1Q8TBF4 217 aaKnown RBP19.48■□□□□ 0.71
PLS3-207ENST00000489283 POLR3GLQ9BT43 218 aa19.48■□□□□ 0.71
PLS3-207ENST00000489283 NSD2O96028 1365 aa19.47■□□□□ 0.71
PLS3-207ENST00000489283 EMILIN1Q9Y6C2 1016 aa19.47■□□□□ 0.71
PLS3-207ENST00000489283 TOGARAM1Q9Y4F4 1720 aa19.46■□□□□ 0.71
PLS3-207ENST00000489283 ZBTB7AO95365 584 aa19.46■□□□□ 0.71
PLS3-207ENST00000489283 EIF4G2P78344 907 aaKnown RBP eCLIP19.46■□□□□ 0.71
PLS3-207ENST00000489283 CGNL1Q0VF96 1302 aa19.46■□□□□ 0.71
PLS3-207ENST00000489283 HSPA5P11021 654 aaKnown RBP19.45■□□□□ 0.7
PLS3-207ENST00000489283 RAPGEF4Q8WZA2 1011 aa19.45■□□□□ 0.7
PLS3-207ENST00000489283 SYTL4Q96C24 671 aaPredicted RBP19.45■□□□□ 0.7
PLS3-207ENST00000489283 PRIM1P49642 420 aaKnown RBP19.44■□□□□ 0.7
PLS3-207ENST00000489283 LRRC4BQ9NT99 713 aa19.44■□□□□ 0.7
PLS3-207ENST00000489283 ITGB4P16144 1822 aa19.44■□□□□ 0.7
PLS3-207ENST00000489283 NCAPD2Q15021 1401 aa19.43■□□□□ 0.7
PLS3-207ENST00000489283 TATP17735 454 aaPredicted RBP19.43■□□□□ 0.7
PLS3-207ENST00000489283 ZNF827Q17R98 1081 aa19.43■□□□□ 0.7
PLS3-207ENST00000489283 C5P01031 1676 aa19.41■□□□□ 0.7
PLS3-207ENST00000489283 PPM1GO15355 546 aaPredicted RBP19.41■□□□□ 0.7
PLS3-207ENST00000489283 PTGER2P43116 358 aa19.41■□□□□ 0.7
PLS3-207ENST00000489283 ATF5Q9Y2D1 282 aaPredicted RBP19.41■□□□□ 0.7
PLS3-207ENST00000489283 PCDH11XQ9BZA7 1347 aa19.41■□□□□ 0.7
PLS3-207ENST00000489283 PCDH11YQ9BZA8 1340 aa19.41■□□□□ 0.7
PLS3-207ENST00000489283 SLC27A3Q5K4L6 730 aa19.4■□□□□ 0.7
PLS3-207ENST00000489283 COL24A1Q17RW2 1714 aa19.39■□□□□ 0.7
PLS3-207ENST00000489283 MTFR1LQ9H019 292 aa19.39■□□□□ 0.69
PLS3-207ENST00000489283 WASHC2AQ641Q2 1341 aa19.39■□□□□ 0.69
PLS3-207ENST00000489283 TAF1LQ8IZX4 1826 aa19.39■□□□□ 0.69
PLS3-207ENST00000489283 AKT1S1Q96B36 256 aa19.38■□□□□ 0.69
PLS3-207ENST00000489283 KCNQ4P56696 695 aa19.37■□□□□ 0.69
PLS3-207ENST00000489283 POLKQ9UBT6 870 aa19.37■□□□□ 0.69
PLS3-207ENST00000489283 PANK3Q9H999 370 aa19.36■□□□□ 0.69
PLS3-207ENST00000489283 CYP27B1O15528 508 aa19.35■□□□□ 0.69
PLS3-207ENST00000489283 TNNT2P45379 298 aaPredicted RBP19.35■□□□□ 0.69
PLS3-207ENST00000489283 SGIP1Q9BQI5 828 aa19.35■□□□□ 0.69
PLS3-207ENST00000489283 EYA1Q99502 592 aa19.34■□□□□ 0.69
PLS3-207ENST00000489283 CCNL1Q9UK58 526 aaPredicted RBP19.34■□□□□ 0.69
PLS3-207ENST00000489283 PNPLA7Q6ZV29 1317 aa19.33■□□□□ 0.69
PLS3-207ENST00000489283 EIF4A2Q14240 407 aaKnown RBP19.31■□□□□ 0.68
PLS3-207ENST00000489283 FHDC1Q9C0D6 1143 aaPredicted RBP19.31■□□□□ 0.68
PLS3-207ENST00000489283 TFCP2L1Q9NZI6 479 aa19.31■□□□□ 0.68
PLS3-207ENST00000489283 PALLDQ8WX93 1383 aa19.31■□□□□ 0.68
PLS3-207ENST00000489283 MPRIPQ6WCQ1 1025 aa19.3■□□□□ 0.68
PLS3-207ENST00000489283 SPG7Q9UQ90 795 aa19.3■□□□□ 0.68
PLS3-207ENST00000489283 C4BP0C0L5 1744 aa19.3■□□□□ 0.68
PLS3-207ENST00000489283 DCAF8L1A6NGE4 600 aa19.29■□□□□ 0.68
PLS3-207ENST00000489283 SLC16A10Q8TF71 515 aa19.28■□□□□ 0.68
PLS3-207ENST00000489283 ARXQ96QS3 562 aa19.28■□□□□ 0.68
PLS3-207ENST00000489283 SYT17Q9BSW7 474 aa19.28■□□□□ 0.68
PLS3-207ENST00000489283 UBR3Q6ZT12 1888 aa19.27■□□□□ 0.68
PLS3-207ENST00000489283 NKX1-1Q15270 411 aaPredicted RBP19.27■□□□□ 0.68
PLS3-207ENST00000489283 IGSF1Q8N6C5 1336 aa19.26■□□□□ 0.67
PLS3-207ENST00000489283 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.26■□□□□ 0.677e-8■■□□□ 12.6
PLS3-207ENST00000489283 MAP3K5Q99683 1374 aa19.26■□□□□ 0.67
PLS3-207ENST00000489283 PLEKHG2Q9H7P9 1386 aa19.26■□□□□ 0.67
PLS3-207ENST00000489283 YY1P25490 414 aa19.25■□□□□ 0.67
PLS3-207ENST00000489283 MORC1Q86VD1 984 aa19.25■□□□□ 0.67
PLS3-207ENST00000489283 KIF7Q2M1P5 1343 aa19.25■□□□□ 0.67
PLS3-207ENST00000489283 PHKG2P15735 406 aa19.24■□□□□ 0.67
PLS3-207ENST00000489283 PIGBQ92521 554 aa19.24■□□□□ 0.67
PLS3-207ENST00000489283 CHD4Q14839 1912 aa19.23■□□□□ 0.67
PLS3-207ENST00000489283 POLD1P28340 1107 aa19.23■□□□□ 0.67
PLS3-207ENST00000489283 IFNL2Q8IZJ0 200 aa19.23■□□□□ 0.67
PLS3-207ENST00000489283 SMARCC1Q92922 1105 aaPredicted RBP19.23■□□□□ 0.67
PLS3-207ENST00000489283 KNSTRNQ9Y448 316 aa19.23■□□□□ 0.67
PLS3-207ENST00000489283 COL23A1Q86Y22 540 aaPredicted RBP19.22■□□□□ 0.67
PLS3-207ENST00000489283 MSH5O43196 834 aa19.21■□□□□ 0.67
PLS3-207ENST00000489283 TMOD3Q9NYL9 352 aa19.21■□□□□ 0.67
PLS3-207ENST00000489283 KLHL34Q8N239 644 aa19.2■□□□□ 0.66
PLS3-207ENST00000489283 VIRMAQ69YN4 1812 aaKnown RBP19.2■□□□□ 0.66
PLS3-207ENST00000489283 AMER1Q5JTC6 1135 aaPredicted RBP19.19■□□□□ 0.66
PLS3-207ENST00000489283 ZNF831Q5JPB2 1677 aa19.19■□□□□ 0.66
PLS3-207ENST00000489283 COL5A3P25940 1745 aaPredicted RBP19.18■□□□□ 0.66
PLS3-207ENST00000489283 HMGB2P26583 209 aaKnown RBP19.18■□□□□ 0.66
PLS3-207ENST00000489283 KDM6AO15550 1401 aaPredicted RBP19.17■□□□□ 0.66
PLS3-207ENST00000489283 SCN11AQ9UI33 1791 aa19.17■□□□□ 0.66
PLS3-207ENST00000489283 LOC102724428A0A0B4J2F2 783 aa19.17■□□□□ 0.66
PLS3-207ENST00000489283 SIK1P57059 783 aa19.17■□□□□ 0.66
PLS3-207ENST00000489283 MSL1Q68DK7 614 aa19.17■□□□□ 0.66
PLS3-207ENST00000489283 AEBP1Q8IUX7 1158 aa19.17■□□□□ 0.66
PLS3-207ENST00000489283 AK7Q96M32 723 aa19.17■□□□□ 0.66
PLS3-207ENST00000489283 ASAP1Q9ULH1 1129 aa19.17■□□□□ 0.66
PLS3-207ENST00000489283 LINC00116Q8NCU8 138 aa19.16■□□□□ 0.66
PLS3-207ENST00000489283 PLEKHO1Q53GL0 409 aaPredicted RBP19.15■□□□□ 0.66
PLS3-207ENST00000489283 ZNF530Q6P9A1 599 aaPredicted RBP19.15■□□□□ 0.66
PLS3-207ENST00000489283 AMIGO3Q86WK7 504 aa19.15■□□□□ 0.66
PLS3-207ENST00000489283 FLAD1Q8NFF5 587 aa19.15■□□□□ 0.66
PLS3-207ENST00000489283 KDRP35968 1356 aa19.15■□□□□ 0.66
PLS3-207ENST00000489283 ATG3Q9NT62 314 aa19.14■□□□□ 0.65
PLS3-207ENST00000489283 PHF14O94880 888 aa19.13■□□□□ 0.65
PLS3-207ENST00000489283 HSP90AB1P08238 724 aaKnown RBP19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 126.8 ms