RNA–Protein interactions for RNA: ENST00000489274.1

NINJ1-204, Transcript of ninjurin 1, humanhuman

TSL 2

Gene NINJ1, Length 2,026 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NINJ1-204ENST00000489274 USP19O94966 1318 aa18.53■□□□□ 0.56
NINJ1-204ENST00000489274 MSH5O43196 834 aa18.52■□□□□ 0.56
NINJ1-204ENST00000489274 GCP02774 474 aa18.52■□□□□ 0.56
NINJ1-204ENST00000489274 ATF3P18847 181 aa18.52■□□□□ 0.56
NINJ1-204ENST00000489274 HDAC1Q13547 482 aaPredicted RBP18.52■□□□□ 0.56
NINJ1-204ENST00000489274 LTV1Q96GA3 475 aaPredicted RBP18.52■□□□□ 0.56
NINJ1-204ENST00000489274 ARHGEF25Q86VW2 580 aa18.52■□□□□ 0.55
NINJ1-204ENST00000489274 LTN1O94822 1766 aa18.51■□□□□ 0.55
NINJ1-204ENST00000489274 GNAT3A8MTJ3 354 aa18.51■□□□□ 0.55
NINJ1-204ENST00000489274 API5Q9BZZ5 524 aaKnown RBP18.51■□□□□ 0.55
NINJ1-204ENST00000489274 ANP32AP39687 249 aaKnown RBP18.5■□□□□ 0.55
NINJ1-204ENST00000489274 RGS3P49796 1198 aa18.5■□□□□ 0.55
NINJ1-204ENST00000489274 FAM161AQ3B820 660 aa18.5■□□□□ 0.55
NINJ1-204ENST00000489274 TRPM3Q9HCF6 1732 aaPredicted RBP18.5■□□□□ 0.55
NINJ1-204ENST00000489274 ABCC4O15439 1325 aa18.5■□□□□ 0.55
NINJ1-204ENST00000489274 XPCQ01831 940 aaPredicted RBP18.5■□□□□ 0.55
NINJ1-204ENST00000489274 BABAM1Q9NWV8 329 aa18.49■□□□□ 0.55
NINJ1-204ENST00000489274 ZBTB7BO15156 539 aaPredicted RBP18.48■□□□□ 0.55
NINJ1-204ENST00000489274 HSPA2P54652 639 aa18.48■□□□□ 0.55
NINJ1-204ENST00000489274 NBPF6Q5VWK0 638 aa18.48■□□□□ 0.55
NINJ1-204ENST00000489274 CADPS2Q86UW7 1296 aa18.48■□□□□ 0.55
NINJ1-204ENST00000489274 NBPF4Q96M43 638 aa18.48■□□□□ 0.55
NINJ1-204ENST00000489274 TSPYL4Q9UJ04 414 aa18.48■□□□□ 0.55
NINJ1-204ENST00000489274 MAP3K5Q99683 1374 aa18.48■□□□□ 0.55
NINJ1-204ENST00000489274 STRCP1A6NGW2 1772 aa18.48■□□□□ 0.55
NINJ1-204ENST00000489274 MSH6P52701 1360 aa18.47■□□□□ 0.55
NINJ1-204ENST00000489274 C8orf34Q49A92 452 aa18.47■□□□□ 0.55
NINJ1-204ENST00000489274 PDZRN3Q9UPQ7 1066 aa18.47■□□□□ 0.55
NINJ1-204ENST00000489274 KRT24Q2M2I5 525 aa18.46■□□□□ 0.55
NINJ1-204ENST00000489274 IL17REQ8NFR9 667 aa18.45■□□□□ 0.54
NINJ1-204ENST00000489274 LRRC37A3O60309 1634 aa18.45■□□□□ 0.54
NINJ1-204ENST00000489274 NCAPD2Q15021 1401 aa18.45■□□□□ 0.54
NINJ1-204ENST00000489274 LMOD2Q6P5Q4 547 aa18.45■□□□□ 0.54
NINJ1-204ENST00000489274 USHBP1Q8N6Y0 703 aa18.45■□□□□ 0.54
NINJ1-204ENST00000489274 IPO9Q96P70 1041 aaKnown RBP18.45■□□□□ 0.54
NINJ1-204ENST00000489274 MIS18AQ9NYP9 233 aa18.45■□□□□ 0.54
NINJ1-204ENST00000489274 SOS1Q07889 1333 aaPredicted RBP18.44■□□□□ 0.54
NINJ1-204ENST00000489274 SMC5Q8IY18 1101 aa18.44■□□□□ 0.54
NINJ1-204ENST00000489274 PTPRCP08575 1304 aa18.44■□□□□ 0.54
NINJ1-204ENST00000489274 KDM4FA0A1W2PPD8 638 aa18.44■□□□□ 0.54
NINJ1-204ENST00000489274 TAF7Q15545 349 aaPredicted RBP18.43■□□□□ 0.54
NINJ1-204ENST00000489274 ALS2Q96Q42 1657 aa18.42■□□□□ 0.54
NINJ1-204ENST00000489274 ZBTB7CA1YPR0 619 aa18.42■□□□□ 0.54
NINJ1-204ENST00000489274 INTS3Q68E01 1043 aaKnown RBP18.42■□□□□ 0.54
NINJ1-204ENST00000489274 NPHP3Q7Z494 1330 aa18.41■□□□□ 0.54
NINJ1-204ENST00000489274 LMTK3Q96Q04 1460 aa18.41■□□□□ 0.54
NINJ1-204ENST00000489274 ANKRD24Q8TF21 1146 aa18.41■□□□□ 0.54
NINJ1-204ENST00000489274 CEMIPQ8WUJ3 1361 aa18.41■□□□□ 0.54
NINJ1-204ENST00000489274 AMOTQ4VCS5 1084 aa18.4■□□□□ 0.54
NINJ1-204ENST00000489274 PLEKHO1Q53GL0 409 aaPredicted RBP18.4■□□□□ 0.54
NINJ1-204ENST00000489274 LRRC59Q96AG4 307 aaKnown RBP18.4■□□□□ 0.54
NINJ1-204ENST00000489274 RGS12O14924 1447 aa18.4■□□□□ 0.54
NINJ1-204ENST00000489274 SLC4A2P04920 1241 aa18.39■□□□□ 0.53
NINJ1-204ENST00000489274 AXIN2Q9Y2T1 843 aa18.39■□□□□ 0.53
NINJ1-204ENST00000489274 MED1Q15648 1581 aaPredicted RBP18.38■□□□□ 0.53
NINJ1-204ENST00000489274 AKAP4Q5JQC9 854 aa18.38■□□□□ 0.53
NINJ1-204ENST00000489274 NPM2Q86SE8 214 aaKnown RBP18.38■□□□□ 0.53
NINJ1-204ENST00000489274 ANP32EQ9BTT0 268 aa18.37■□□□□ 0.53
NINJ1-204ENST00000489274 CAMTA1Q9Y6Y1 1673 aa18.36■□□□□ 0.53
NINJ1-204ENST00000489274 NOP58Q9Y2X3 529 aaKnown RBP18.36■□□□□ 0.53
NINJ1-204ENST00000489274 TNS3Q68CZ2 1445 aa18.35■□□□□ 0.53
NINJ1-204ENST00000489274 CCDC30Q5VVM6 783 aa18.35■□□□□ 0.53
NINJ1-204ENST00000489274 DDX17Q92841 729 aaKnown RBP18.35■□□□□ 0.53
NINJ1-204ENST00000489274 GCC1Q96CN9 775 aa18.35■□□□□ 0.53
NINJ1-204ENST00000489274 STRCQ7RTU9 1775 aa18.35■□□□□ 0.53
NINJ1-204ENST00000489274 ZC3H6P61129 1189 aaKnown RBP18.35■□□□□ 0.53
NINJ1-204ENST00000489274 NUCB1Q02818 461 aa18.35■□□□□ 0.53
NINJ1-204ENST00000489274 ZNF530Q6P9A1 599 aaPredicted RBP18.35■□□□□ 0.53
NINJ1-204ENST00000489274 STK31Q9BXU1 1019 aa18.35■□□□□ 0.53
NINJ1-204ENST00000489274 PXDNQ92626 1479 aa18.35■□□□□ 0.53
NINJ1-204ENST00000489274 ERBB3P21860 1342 aa18.35■□□□□ 0.53
NINJ1-204ENST00000489274 SPATA31A3Q5VYP0 1347 aa18.35■□□□□ 0.53
NINJ1-204ENST00000489274 PLEKHG5O94827 1062 aa18.34■□□□□ 0.53
NINJ1-204ENST00000489274 RGPD2P0DJD1 1756 aa18.34■□□□□ 0.53
NINJ1-204ENST00000489274 ERICH6Q7L0X2 663 aa18.33■□□□□ 0.53
NINJ1-204ENST00000489274 LGR6Q9HBX8 967 aa18.33■□□□□ 0.53
NINJ1-204ENST00000489274 ZBTB47Q9UFB7 747 aaPredicted RBP18.33■□□□□ 0.53
NINJ1-204ENST00000489274 OVOS2A0A0G2JMS6 1433 aa18.33■□□□□ 0.53
NINJ1-204ENST00000489274 SIRT2Q8IXJ6 389 aa18.33■□□□□ 0.52
NINJ1-204ENST00000489274 LMO7Q8WWI1 1683 aa18.32■□□□□ 0.52
NINJ1-204ENST00000489274 G2E3Q7L622 706 aa18.32■□□□□ 0.52
NINJ1-204ENST00000489274 C1orf115Q9H7X2 142 aa18.32■□□□□ 0.52
NINJ1-204ENST00000489274 XIRP1Q702N8 1843 aaKnown RBP18.32■□□□□ 0.52
NINJ1-204ENST00000489274 BRINP3Q76B58 766 aa18.32■□□□□ 0.52
NINJ1-204ENST00000489274 DDRGK1Q96HY6 314 aa18.32■□□□□ 0.52
NINJ1-204ENST00000489274 CHMP4AQ9BY43 222 aa18.32■□□□□ 0.52
NINJ1-204ENST00000489274 ABCC6O95255 1503 aa18.31■□□□□ 0.52
NINJ1-204ENST00000489274 HOXB7P09629 217 aa18.31■□□□□ 0.52
NINJ1-204ENST00000489274 CCT4P50991 539 aaKnown RBP18.31■□□□□ 0.52
NINJ1-204ENST00000489274 C1orf141Q5JVX7 400 aa18.31■□□□□ 0.52
NINJ1-204ENST00000489274 RNMTO43148 476 aaKnown RBP18.3■□□□□ 0.52
NINJ1-204ENST00000489274 CHD1LQ86WJ1 897 aa18.3■□□□□ 0.52
NINJ1-204ENST00000489274 EIF4A1P60842 406 aaKnown RBP18.3■□□□□ 0.52
NINJ1-204ENST00000489274 AEBP2Q6ZN18 517 aaPredicted RBP18.3■□□□□ 0.52
NINJ1-204ENST00000489274 RPAP2Q8IXW5 612 aaPredicted RBP18.3■□□□□ 0.52
NINJ1-204ENST00000489274 CPDO75976 1380 aa18.29■□□□□ 0.52
NINJ1-204ENST00000489274 PLEKHG2Q9H7P9 1386 aa18.29■□□□□ 0.52
NINJ1-204ENST00000489274 TEFQ10587 303 aa18.29■□□□□ 0.52
NINJ1-204ENST00000489274 FLIIQ13045 1269 aa18.28■□□□□ 0.52
NINJ1-204ENST00000489274 MPRIPQ6WCQ1 1025 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms