RNA–Protein interactions for RNA: ENST00000489247.1

ATG4A-208, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-208ENST00000489247 FDX1P10109 184 aa7.84□□□□□ -1.15
ATG4A-208ENST00000489247 PRR20EP86478 221 aa7.84□□□□□ -1.15
ATG4A-208ENST00000489247 PRR20CP86479 221 aa7.84□□□□□ -1.15
ATG4A-208ENST00000489247 PRR20DP86480 221 aa7.84□□□□□ -1.15
ATG4A-208ENST00000489247 PRR20BP86481 221 aa7.84□□□□□ -1.15
ATG4A-208ENST00000489247 PRR20AP86496 221 aa7.84□□□□□ -1.15
ATG4A-208ENST00000489247 RSBN1LQ6PCB5 846 aaPredicted RBP7.84□□□□□ -1.15
ATG4A-208ENST00000489247 BRICD5Q6PL45 260 aa7.84□□□□□ -1.15
ATG4A-208ENST00000489247 DDRGK1Q96HY6 314 aa7.84□□□□□ -1.15
ATG4A-208ENST00000489247 AAASQ9NRG9 546 aa7.84□□□□□ -1.15
ATG4A-208ENST00000489247 POLR3EQ9NVU0 708 aa7.84□□□□□ -1.15
ATG4A-208ENST00000489247 LIMD1Q9UGP4 676 aa7.84□□□□□ -1.15
ATG4A-208ENST00000489247 PCDHB15Q9Y5E8 787 aa7.84□□□□□ -1.15
ATG4A-208ENST00000489247 RIC3Q7Z5B4 369 aa7.83□□□□□ -1.16
ATG4A-208ENST00000489247 C14orf37Q86TY3 774 aa7.83□□□□□ -1.16
ATG4A-208ENST00000489247 AFAP1Q8N556 730 aa7.83□□□□□ -1.16
ATG4A-208ENST00000489247 SPSB2Q99619 263 aa7.83□□□□□ -1.16
ATG4A-208ENST00000489247 PTPRTO14522 1441 aa7.83□□□□□ -1.16
ATG4A-208ENST00000489247 PRDM15P57071 1507 aaPredicted RBP7.83□□□□□ -1.16
ATG4A-208ENST00000489247 LMTK2Q8IWU2 1503 aa7.83□□□□□ -1.16
ATG4A-208ENST00000489247 SPTLC1O15269 473 aa7.82□□□□□ -1.16
ATG4A-208ENST00000489247 ADH1BP00325 375 aa7.82□□□□□ -1.16
ATG4A-208ENST00000489247 CSPP1Q1MSJ5 1256 aa7.82□□□□□ -1.16
ATG4A-208ENST00000489247 FAM160A2Q8N612 972 aaPredicted RBP7.82□□□□□ -1.16
ATG4A-208ENST00000489247 NEURL4Q96JN8 1562 aa7.82□□□□□ -1.16
ATG4A-208ENST00000489247 PRDM9Q9NQV7 894 aa7.82□□□□□ -1.16
ATG4A-208ENST00000489247 RALGAPBQ86X10 1494 aa7.81□□□□□ -1.16
ATG4A-208ENST00000489247 FMNL1O95466 1100 aaPredicted RBP7.81□□□□□ -1.16
ATG4A-208ENST00000489247 S1PR4O95977 384 aa7.81□□□□□ -1.16
ATG4A-208ENST00000489247 DIXDC1Q155Q3 683 aa7.81□□□□□ -1.16
ATG4A-208ENST00000489247 NBPF8Q3BBV2 869 aa7.81□□□□□ -1.16
ATG4A-208ENST00000489247 RIMBP3CA6NJZ7 1639 aa7.81□□□□□ -1.16
ATG4A-208ENST00000489247 RIMBP3BA6NNM3 1639 aa7.81□□□□□ -1.16
ATG4A-208ENST00000489247 RIMBP3Q9UFD9 1639 aa7.81□□□□□ -1.16
ATG4A-208ENST00000489247 BCORL1Q5H9F3 1711 aa7.81□□□□□ -1.16
ATG4A-208ENST00000489247 CCDC144AA2RUR9 1427 aa7.8□□□□□ -1.16
ATG4A-208ENST00000489247 SLC19A1P41440 591 aa7.8□□□□□ -1.16
ATG4A-208ENST00000489247 EIF4G2P78344 907 aaKnown RBP eCLIP7.8□□□□□ -1.16
ATG4A-208ENST00000489247 QPCTQ16769 361 aa7.8□□□□□ -1.16
ATG4A-208ENST00000489247 FBXO31Q5XUX0 539 aaPredicted RBP7.8□□□□□ -1.16
ATG4A-208ENST00000489247 PROCA1Q8NCQ7 364 aaPredicted RBP7.8□□□□□ -1.16
ATG4A-208ENST00000489247 CABLES1Q8TDN4 633 aa7.8□□□□□ -1.16
ATG4A-208ENST00000489247 SALL2Q9Y467 1007 aaPredicted RBP7.8□□□□□ -1.16
ATG4A-208ENST00000489247 MROH1Q8NDA8 1641 aa7.8□□□□□ -1.16
ATG4A-208ENST00000489247 MAP3K4Q9Y6R4 1608 aa7.8□□□□□ -1.16
ATG4A-208ENST00000489247 TRPM2O94759 1503 aa7.79□□□□□ -1.16
ATG4A-208ENST00000489247 RNF17Q9BXT8 1623 aaKnown RBP7.79□□□□□ -1.16
ATG4A-208ENST00000489247 C6orf229H3BNL8 230 aa7.79□□□□□ -1.16
ATG4A-208ENST00000489247 PPEF1O14829 653 aaPredicted RBP7.79□□□□□ -1.16
ATG4A-208ENST00000489247 CLK2P49760 499 aaKnown RBP7.79□□□□□ -1.16
ATG4A-208ENST00000489247 Q3C1V9 767 aa7.79□□□□□ -1.16
ATG4A-208ENST00000489247 SH3D19Q5HYK7 790 aa7.79□□□□□ -1.16
ATG4A-208ENST00000489247 RSPH6AQ9H0K4 717 aa7.79□□□□□ -1.16
ATG4A-208ENST00000489247 GPRASP1Q5JY77 1395 aa7.79□□□□□ -1.16
ATG4A-208ENST00000489247 A2MP01023 1474 aa7.79□□□□□ -1.16
ATG4A-208ENST00000489247 KIDINS220Q9ULH0 1771 aa7.79□□□□□ -1.16
ATG4A-208ENST00000489247 ARID4BQ4LE39 1312 aaPredicted RBP7.78□□□□□ -1.16
ATG4A-208ENST00000489247 FAM181BA6NEQ2 426 aa7.78□□□□□ -1.16
ATG4A-208ENST00000489247 HSPA5P11021 654 aaKnown RBP7.78□□□□□ -1.16
ATG4A-208ENST00000489247 SKIV2LQ15477 1246 aaKnown RBP7.78□□□□□ -1.16
ATG4A-208ENST00000489247 USB1Q9BQ65 265 aaKnown RBP7.78□□□□□ -1.16
ATG4A-208ENST00000489247 SLC6A16Q9GZN6 736 aa7.78□□□□□ -1.16
ATG4A-208ENST00000489247 FRMPD1Q5SYB0 1578 aa7.78□□□□□ -1.16
ATG4A-208ENST00000489247 HECW2Q9P2P5 1572 aa7.78□□□□□ -1.16
ATG4A-208ENST00000489247 TET3O43151 1660 aa7.78□□□□□ -1.16
ATG4A-208ENST00000489247 ZMYM4Q5VZL5 1548 aa7.78□□□□□ -1.16
ATG4A-208ENST00000489247 PRAG1Q86YV5 1406 aa7.78□□□□□ -1.16
ATG4A-208ENST00000489247 KANK1Q14678 1352 aa7.77□□□□□ -1.17
ATG4A-208ENST00000489247 GJA5P36382 358 aa7.77□□□□□ -1.17
ATG4A-208ENST00000489247 SPRYD7Q5W111 196 aa7.77□□□□□ -1.17
ATG4A-208ENST00000489247 ERICH6Q7L0X2 663 aa7.77□□□□□ -1.17
ATG4A-208ENST00000489247 ZNF598Q86UK7 904 aaKnown RBP7.77□□□□□ -1.17
ATG4A-208ENST00000489247 EMID1Q96A84 441 aaPredicted RBP7.77□□□□□ -1.17
ATG4A-208ENST00000489247 DIP2BQ9P265 1576 aa7.76□□□□□ -1.17
ATG4A-208ENST00000489247 RNF223E7ERA6 249 aa7.76□□□□□ -1.17
ATG4A-208ENST00000489247 MTMR2Q13614 643 aa7.76□□□□□ -1.17
ATG4A-208ENST00000489247 LCE2CQ5TA81 110 aa7.76□□□□□ -1.17
ATG4A-208ENST00000489247 RETREG3Q86VR2 466 aa7.76□□□□□ -1.17
ATG4A-208ENST00000489247 EFCAB6Q5THR3 1501 aa7.76□□□□□ -1.17
ATG4A-208ENST00000489247 WASHC2AQ641Q2 1341 aa7.76□□□□□ -1.17
ATG4A-208ENST00000489247 LAMC1P11047 1609 aa7.75□□□□□ -1.17
ATG4A-208ENST00000489247 CCDC7Q96M83 1385 aa7.75□□□□□ -1.17
ATG4A-208ENST00000489247 C11orf95C9JLR9 678 aaPredicted RBP7.75□□□□□ -1.17
ATG4A-208ENST00000489247 CCER2I3L3R5 266 aa7.75□□□□□ -1.17
ATG4A-208ENST00000489247 LILRB3O75022 631 aa7.75□□□□□ -1.17
ATG4A-208ENST00000489247 MSS51Q4VC12 460 aa7.75□□□□□ -1.17
ATG4A-208ENST00000489247 RTL5Q5HYW3 569 aaPredicted RBP7.75□□□□□ -1.17
ATG4A-208ENST00000489247 USP47Q96K76 1375 aa7.74□□□□□ -1.17
ATG4A-208ENST00000489247 E9PCH4 1651 aa7.74□□□□□ -1.17
ATG4A-208ENST00000489247 CFAP99D6REC4 459 aa7.74□□□□□ -1.17
ATG4A-208ENST00000489247 TNFRSF10AO00220 468 aa7.74□□□□□ -1.17
ATG4A-208ENST00000489247 CENPBP07199 599 aaPredicted RBP7.74□□□□□ -1.17
ATG4A-208ENST00000489247 TUSC1Q2TAM9 212 aa7.74□□□□□ -1.17
ATG4A-208ENST00000489247 CYB5RLQ6IPT4 315 aa7.74□□□□□ -1.17
ATG4A-208ENST00000489247 PRR7Q8TB68 274 aa7.74□□□□□ -1.17
ATG4A-208ENST00000489247 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.74□□□□□ -1.17
ATG4A-208ENST00000489247 ZBTB3Q9H5J0 574 aa7.74□□□□□ -1.17
ATG4A-208ENST00000489247 GMPR2Q9P2T1 348 aaKnown RBP7.74□□□□□ -1.17
ATG4A-208ENST00000489247 ARHGAP31Q2M1Z3 1444 aa7.74□□□□□ -1.17
ATG4A-208ENST00000489247 REREQ9P2R6 1566 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms