RNA–Protein interactions for RNA: ENST00000489003.5

FDPS-213, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-213ENST00000489003 RGPD1P0DJD0 1748 aa20.36■□□□□ 0.85
FDPS-213ENST00000489003 MYBBP1AQ9BQG0 1328 aaKnown RBP20.36■□□□□ 0.85
FDPS-213ENST00000489003 U2SURPO15042 1029 aaKnown RBP20.35■□□□□ 0.85
FDPS-213ENST00000489003 TNS2Q63HR2 1409 aa20.35■□□□□ 0.85
FDPS-213ENST00000489003 HMOX1P09601 288 aa20.34■□□□□ 0.85
FDPS-213ENST00000489003 NUDCQ9Y266 331 aa20.34■□□□□ 0.85
FDPS-213ENST00000489003 KDRP35968 1356 aa20.34■□□□□ 0.85
FDPS-213ENST00000489003 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.33■□□□□ 0.856e-9■□□□□ 10.6
FDPS-213ENST00000489003 SPG7Q9UQ90 795 aa20.32■□□□□ 0.84
FDPS-213ENST00000489003 KAT6BQ8WYB5 2073 aa20.31■□□□□ 0.84
FDPS-213ENST00000489003 SHANK3Q9BYB0 1731 aa20.31■□□□□ 0.84
FDPS-213ENST00000489003 CYP27B1O15528 508 aa20.31■□□□□ 0.84
FDPS-213ENST00000489003 CCDC125Q86Z20 511 aa20.31■□□□□ 0.84
FDPS-213ENST00000489003 ANP32CO43423 234 aa20.3■□□□□ 0.84
FDPS-213ENST00000489003 TRIM37O94972 964 aa20.3■□□□□ 0.84
FDPS-213ENST00000489003 PLEKHO1Q53GL0 409 aaPredicted RBP20.3■□□□□ 0.84
FDPS-213ENST00000489003 BCL9O00512 1426 aa20.29■□□□□ 0.84
FDPS-213ENST00000489003 U2AF1L5P0DN76 240 aaPredicted RBP20.29■□□□□ 0.84
FDPS-213ENST00000489003 U2AF1Q01081 240 aaKnown RBP eCLIP20.29■□□□□ 0.84
FDPS-213ENST00000489003 SBF2Q86WG5 1849 aa20.29■□□□□ 0.84
FDPS-213ENST00000489003 PTF1AQ7RTS3 328 aa20.28■□□□□ 0.84
FDPS-213ENST00000489003 PCDH11XQ9BZA7 1347 aa20.27■□□□□ 0.84
FDPS-213ENST00000489003 PCDH11YQ9BZA8 1340 aa20.27■□□□□ 0.84
FDPS-213ENST00000489003 PKD1L3Q7Z443 1732 aa20.27■□□□□ 0.84
FDPS-213ENST00000489003 AMOTQ4VCS5 1084 aa20.27■□□□□ 0.84
FDPS-213ENST00000489003 ACSBG1Q96GR2 724 aa20.27■□□□□ 0.84
FDPS-213ENST00000489003 PLEKHG2Q9H7P9 1386 aa20.26■□□□□ 0.83
FDPS-213ENST00000489003 KCNQ2O43526 872 aa20.26■□□□□ 0.83
FDPS-213ENST00000489003 NKX1-1Q15270 411 aaPredicted RBP20.26■□□□□ 0.83
FDPS-213ENST00000489003 IFNL2Q8IZJ0 200 aa20.26■□□□□ 0.83
FDPS-213ENST00000489003 RSPH6AQ9H0K4 717 aa20.26■□□□□ 0.83
FDPS-213ENST00000489003 FCHSD2O94868 740 aa20.25■□□□□ 0.83
FDPS-213ENST00000489003 PHKG2P15735 406 aa20.25■□□□□ 0.83
FDPS-213ENST00000489003 BCL11BQ9C0K0 894 aaPredicted RBP20.25■□□□□ 0.83
FDPS-213ENST00000489003 EP400Q96L91 3159 aa20.24■□□□□ 0.83
FDPS-213ENST00000489003 SF3B2Q13435 895 aaKnown RBP20.24■□□□□ 0.83
FDPS-213ENST00000489003 CCDC184Q52MB2 194 aa20.24■□□□□ 0.83
FDPS-213ENST00000489003 PRKAR2BP31323 418 aa20.23■□□□□ 0.83
FDPS-213ENST00000489003 MTHFSDQ2M296 383 aaKnown RBP20.23■□□□□ 0.83
FDPS-213ENST00000489003 ZNF530Q6P9A1 599 aaPredicted RBP20.23■□□□□ 0.83
FDPS-213ENST00000489003 DEFB132Q7Z7B7 95 aa20.23■□□□□ 0.83
FDPS-213ENST00000489003 PHACTR3Q96KR7 559 aa20.23■□□□□ 0.83
FDPS-213ENST00000489003 APBA3O96018 575 aa20.22■□□□□ 0.83
FDPS-213ENST00000489003 PRIM1P49642 420 aaKnown RBP20.22■□□□□ 0.83
FDPS-213ENST00000489003 EN1Q05925 392 aaPredicted RBP20.19■□□□□ 0.82
FDPS-213ENST00000489003 AKAP4Q5JQC9 854 aa20.19■□□□□ 0.82
FDPS-213ENST00000489003 TNS1Q9HBL0 1735 aaKnown RBP20.19■□□□□ 0.82
FDPS-213ENST00000489003 HSP90AB1P08238 724 aaKnown RBP20.18■□□□□ 0.82
FDPS-213ENST00000489003 BAG6P46379 1132 aa20.18■□□□□ 0.82
FDPS-213ENST00000489003 C1orf141Q5JVX7 400 aa20.18■□□□□ 0.82
FDPS-213ENST00000489003 SYTL4Q96C24 671 aaPredicted RBP20.18■□□□□ 0.82
FDPS-213ENST00000489003 PLEKHF1Q96S99 279 aa20.18■□□□□ 0.82
FDPS-213ENST00000489003 ADAMTS8Q9UP79 889 aa20.18■□□□□ 0.82
FDPS-213ENST00000489003 MPRIPQ6WCQ1 1025 aa20.17■□□□□ 0.82
FDPS-213ENST00000489003 NHSQ6T4R5 1651 aa20.16■□□□□ 0.82
FDPS-213ENST00000489003 DOT1LQ8TEK3 1739 aa20.16■□□□□ 0.82
FDPS-213ENST00000489003 GAS2L2Q8NHY3 880 aa20.16■□□□□ 0.82
FDPS-213ENST00000489003 DCAF5Q96JK2 942 aa20.16■□□□□ 0.82
FDPS-213ENST00000489003 CAMKK2Q96RR4 588 aa20.16■□□□□ 0.82
FDPS-213ENST00000489003 PLSCR1O15162 318 aa20.15■□□□□ 0.82
FDPS-213ENST00000489003 WDR43Q15061 677 aaKnown RBP eCLIP20.15■□□□□ 0.823e-7■■■■□ 25.4
FDPS-213ENST00000489003 EZH2Q15910 746 aaKnown RBP20.15■□□□□ 0.82
FDPS-213ENST00000489003 PNNQ9H307 717 aaKnown RBP20.15■□□□□ 0.82
FDPS-213ENST00000489003 LGR6Q9HBX8 967 aa20.15■□□□□ 0.82
FDPS-213ENST00000489003 ITGB4P16144 1822 aa20.15■□□□□ 0.82
FDPS-213ENST00000489003 TOGARAM1Q9Y4F4 1720 aa20.14■□□□□ 0.81
FDPS-213ENST00000489003 ERVV-2B6SEH9 535 aa20.14■□□□□ 0.81
FDPS-213ENST00000489003 DIEXFQ68CQ4 756 aaKnown RBP20.14■□□□□ 0.81
FDPS-213ENST00000489003 MRS2Q9HD23 443 aa20.14■□□□□ 0.81
FDPS-213ENST00000489003 PROM2Q8N271 834 aa20.13■□□□□ 0.81
FDPS-213ENST00000489003 PIGBQ92521 554 aa20.13■□□□□ 0.81
FDPS-213ENST00000489003 BTAF1O14981 1849 aa20.13■□□□□ 0.81
FDPS-213ENST00000489003 KDM6AO15550 1401 aaPredicted RBP20.12■□□□□ 0.81
FDPS-213ENST00000489003 GNAT3A8MTJ3 354 aa20.12■□□□□ 0.81
FDPS-213ENST00000489003 RNMTO43148 476 aaKnown RBP20.12■□□□□ 0.81
FDPS-213ENST00000489003 PNISRQ8TF01 805 aaKnown RBP20.12■□□□□ 0.81
FDPS-213ENST00000489003 NEFMP07197 916 aa20.11■□□□□ 0.81
FDPS-213ENST00000489003 IL17REQ8NFR9 667 aa20.11■□□□□ 0.81
FDPS-213ENST00000489003 CABP4P57796 275 aa20.1■□□□□ 0.81
FDPS-213ENST00000489003 CCDC146Q8IYE0 955 aa20.1■□□□□ 0.81
FDPS-213ENST00000489003 NFATC2IPQ8NCF5 419 aa20.1■□□□□ 0.81
FDPS-213ENST00000489003 TMOD3Q9NYL9 352 aa20.1■□□□□ 0.81
FDPS-213ENST00000489003 SCN11AQ9UI33 1791 aa20.1■□□□□ 0.81
FDPS-213ENST00000489003 VIRMAQ69YN4 1812 aaKnown RBP20.09■□□□□ 0.81
FDPS-213ENST00000489003 MAPK8IP3Q9UPT6 1336 aa20.08■□□□□ 0.81
FDPS-213ENST00000489003 RUNDC1Q96C34 613 aa20.08■□□□□ 0.81
FDPS-213ENST00000489003 MAP3K5Q99683 1374 aa20.08■□□□□ 0.8
FDPS-213ENST00000489003 NFE2L2Q16236 605 aa20.07■□□□□ 0.8
FDPS-213ENST00000489003 TXNRD1Q16881 649 aa20.07■□□□□ 0.8
FDPS-213ENST00000489003 HTATSF1O43719 755 aaKnown RBP20.06■□□□□ 0.8
FDPS-213ENST00000489003 SLC52A2Q9HAB3 445 aa20.06■□□□□ 0.8
FDPS-213ENST00000489003 ATG3Q9NT62 314 aa20.06■□□□□ 0.8
FDPS-213ENST00000489003 ASAP1Q9ULH1 1129 aa20.06■□□□□ 0.8
FDPS-213ENST00000489003 DLG5Q8TDM6 1919 aa20.06■□□□□ 0.8
FDPS-213ENST00000489003 ADAMTS7Q9UKP4 1686 aa20.05■□□□□ 0.8
FDPS-213ENST00000489003 TMPOP42166 694 aaKnown RBP20.04■□□□□ 0.8
FDPS-213ENST00000489003 RIPK4P57078 832 aa20.04■□□□□ 0.8
FDPS-213ENST00000489003 DCTN1Q14203 1278 aa20.04■□□□□ 0.8
FDPS-213ENST00000489003 SMARCC1Q92922 1105 aaPredicted RBP20.04■□□□□ 0.8
FDPS-213ENST00000489003 RGPD3A6NKT7 1758 aaPredicted RBP20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms