RNA–Protein interactions for RNA: ENST00000488981.1

NF1-212, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 331 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-212ENST00000488981 GDF11O95390 407 aa4.62□□□□□ -1.67
NF1-212ENST00000488981 ZIC2O95409 532 aaPredicted RBP4.62□□□□□ -1.67
NF1-212ENST00000488981 IGHA1P01876 353 aa4.62□□□□□ -1.67
NF1-212ENST00000488981 ERVK-9P63128 1117 aa4.62□□□□□ -1.67
NF1-212ENST00000488981 KCTD17Q8N5Z5 321 aa4.62□□□□□ -1.67
NF1-212ENST00000488981 MEIOBQ8N635 442 aa4.62□□□□□ -1.67
NF1-212ENST00000488981 PURBQ96QR8 312 aaKnown RBP4.62□□□□□ -1.67
NF1-212ENST00000488981 ESF1Q9H501 851 aaKnown RBP4.62□□□□□ -1.67
NF1-212ENST00000488981 NR3C2P08235 984 aa4.61□□□□□ -1.67
NF1-212ENST00000488981 GPC1P35052 558 aa4.61□□□□□ -1.67
NF1-212ENST00000488981 RASSF7Q02833 373 aa4.61□□□□□ -1.67
NF1-212ENST00000488981 CC2D2BQ6DHV5 1058 aa4.61□□□□□ -1.67
NF1-212ENST00000488981 TRAK2O60296 914 aa4.6□□□□□ -1.67
NF1-212ENST00000488981 LILRA1O75019 489 aa4.6□□□□□ -1.67
NF1-212ENST00000488981 MYCP01106 439 aaPredicted RBP4.6□□□□□ -1.67
NF1-212ENST00000488981 GNRH1P01148 92 aa4.6□□□□□ -1.67
NF1-212ENST00000488981 FOXK2Q01167 660 aa4.6□□□□□ -1.67
NF1-212ENST00000488981 VAC14Q08AM6 782 aa4.6□□□□□ -1.67
NF1-212ENST00000488981 RNF135Q8IUD6 432 aa4.6□□□□□ -1.67
NF1-212ENST00000488981 ITPKCQ96DU7 683 aa4.6□□□□□ -1.67
NF1-212ENST00000488981 DNMT3AQ9Y6K1 912 aaPredicted RBP4.6□□□□□ -1.67
NF1-212ENST00000488981 SPINT1O43278 529 aa4.59□□□□□ -1.67
NF1-212ENST00000488981 ADH1AP07327 375 aa4.59□□□□□ -1.67
NF1-212ENST00000488981 WDR44Q5JSH3 913 aa4.59□□□□□ -1.67
NF1-212ENST00000488981 CYP2U1Q7Z449 544 aa4.59□□□□□ -1.67
NF1-212ENST00000488981 PLEKHM2Q8IWE5 1019 aa4.59□□□□□ -1.67
NF1-212ENST00000488981 POM121Q96HA1 1249 aa4.59□□□□□ -1.67
NF1-212ENST00000488981 WASLO00401 505 aaPredicted RBP4.58□□□□□ -1.68
NF1-212ENST00000488981 PPFIA3O75145 1194 aa4.58□□□□□ -1.68
NF1-212ENST00000488981 PTGIRP43119 386 aa4.58□□□□□ -1.68
NF1-212ENST00000488981 GSK3AP49840 483 aa4.58□□□□□ -1.68
NF1-212ENST00000488981 ESCO1Q5FWF5 840 aa4.58□□□□□ -1.68
NF1-212ENST00000488981 HDGFL1Q5TGJ6 251 aa4.58□□□□□ -1.68
NF1-212ENST00000488981 KANK3Q6NY19 840 aa4.58□□□□□ -1.68
NF1-212ENST00000488981 TRIM50Q86XT4 487 aa4.58□□□□□ -1.68
NF1-212ENST00000488981 LINC00528Q8N1L1 170 aa4.58□□□□□ -1.68
NF1-212ENST00000488981 ATP5J2-PTCD1G3V325 749 aa4.57□□□□□ -1.68
NF1-212ENST00000488981 BMP2P12643 396 aa4.57□□□□□ -1.68
NF1-212ENST00000488981 RNF144AP50876 292 aaPredicted RBP4.57□□□□□ -1.68
NF1-212ENST00000488981 PLPP7Q8NBV4 271 aa4.57□□□□□ -1.68
NF1-212ENST00000488981 ZNF784Q8NCA9 323 aaPredicted RBP4.57□□□□□ -1.68
NF1-212ENST00000488981 ZFAND3Q9H8U3 227 aa4.57□□□□□ -1.68
NF1-212ENST00000488981 DOLKQ9UPQ8 538 aa4.57□□□□□ -1.68
NF1-212ENST00000488981 PCDHB11Q9Y5F2 797 aa4.57□□□□□ -1.68
NF1-212ENST00000488981 SOS2Q07890 1332 aaPredicted RBP4.56□□□□□ -1.68
NF1-212ENST00000488981 SOBPA7XYQ1 873 aa4.56□□□□□ -1.68
NF1-212ENST00000488981 ATP9BO43861 1147 aa4.56□□□□□ -1.68
NF1-212ENST00000488981 ADD1P35611 737 aaKnown RBP4.56□□□□□ -1.68
NF1-212ENST00000488981 ATP1A2P50993 1020 aa4.56□□□□□ -1.68
NF1-212ENST00000488981 CLN3Q13286 438 aa4.56□□□□□ -1.68
NF1-212ENST00000488981 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.56□□□□□ -1.68
NF1-212ENST00000488981 EML3Q32P44 896 aa4.56□□□□□ -1.68
NF1-212ENST00000488981 UBE2Q2Q8WVN8 375 aa4.56□□□□□ -1.68
NF1-212ENST00000488981 CLUAP1Q96AJ1 413 aa4.56□□□□□ -1.68
NF1-212ENST00000488981 CALR3Q96L12 384 aaKnown RBP4.56□□□□□ -1.68
NF1-212ENST00000488981 ADAMTS8Q9UP79 889 aa4.56□□□□□ -1.68
NF1-212ENST00000488981 C6orf118Q5T5N4 469 aa4.55□□□□□ -1.68
NF1-212ENST00000488981 SVOPQ8N4V2 548 aa4.55□□□□□ -1.68
NF1-212ENST00000488981 GLMNQ92990 594 aa4.55□□□□□ -1.68
NF1-212ENST00000488981 XAGE2Q96GT9 111 aa4.55□□□□□ -1.68
NF1-212ENST00000488981 GMCL1Q96IK5 515 aa4.55□□□□□ -1.68
NF1-212ENST00000488981 CCDC85AQ96PX6 553 aaPredicted RBP4.55□□□□□ -1.68
NF1-212ENST00000488981 OSBPL3Q9H4L5 887 aa4.55□□□□□ -1.68
NF1-212ENST00000488981 NOD1Q9Y239 953 aa4.55□□□□□ -1.68
NF1-212ENST00000488981 TTLL8A6PVC2 850 aa4.54□□□□□ -1.68
NF1-212ENST00000488981 M0R2N6 131 aa4.54□□□□□ -1.68
NF1-212ENST00000488981 GPAT2Q6NUI2 795 aa4.54□□□□□ -1.68
NF1-212ENST00000488981 LARGE2Q8N3Y3 721 aa4.54□□□□□ -1.68
NF1-212ENST00000488981 KDF1Q8NAX2 398 aaPredicted RBP4.54□□□□□ -1.68
NF1-212ENST00000488981 NANOS1Q8WY41 292 aaKnown RBP4.54□□□□□ -1.68
NF1-212ENST00000488981 SCARF2Q96GP6 870 aaPredicted RBP4.54□□□□□ -1.68
NF1-212ENST00000488981 SLC4A9Q96Q91 983 aa4.54□□□□□ -1.68
NF1-212ENST00000488981 ESYT1Q9BSJ8 1104 aa4.54□□□□□ -1.68
NF1-212ENST00000488981 TMPRSS4Q9NRS4 437 aa4.54□□□□□ -1.68
NF1-212ENST00000488981 PODXL2Q9NZ53 605 aa4.54□□□□□ -1.68
NF1-212ENST00000488981 SERPINA10Q9UK55 444 aa4.54□□□□□ -1.68
NF1-212ENST00000488981 BACH1O14867 736 aa4.53□□□□□ -1.68
NF1-212ENST00000488981 SKIP12755 728 aa4.53□□□□□ -1.68
NF1-212ENST00000488981 MARSP56192 900 aaKnown RBP4.53□□□□□ -1.68
NF1-212ENST00000488981 ADAMTS19Q8TE59 1207 aa4.53□□□□□ -1.68
NF1-212ENST00000488981 CNTNAP3BQ96NU0 1288 aa4.53□□□□□ -1.68
NF1-212ENST00000488981 NLRP3Q96P20 1036 aa4.53□□□□□ -1.68
NF1-212ENST00000488981 CNTNAP3Q9BZ76 1288 aa4.53□□□□□ -1.68
NF1-212ENST00000488981 PPP1R12CQ9BZL4 782 aa4.53□□□□□ -1.68
NF1-212ENST00000488981 CYLDQ9NQC7 956 aa4.53□□□□□ -1.68
NF1-212ENST00000488981 A0A1W2PRU2 124 aa4.52□□□□□ -1.69
NF1-212ENST00000488981 PALM3A6NDB9 673 aaPredicted RBP4.52□□□□□ -1.69
NF1-212ENST00000488981 POM121CA8CG34 1229 aa4.52□□□□□ -1.69
NF1-212ENST00000488981 USP17L5A8MUK1 530 aa4.52□□□□□ -1.69
NF1-212ENST00000488981 SPATA31C2B4DYI2 1134 aa4.52□□□□□ -1.69
NF1-212ENST00000488981 CBLBQ13191 982 aa4.52□□□□□ -1.69
NF1-212ENST00000488981 GRIP2Q9C0E4 1043 aa4.52□□□□□ -1.69
NF1-212ENST00000488981 DNMT3LQ9UJW3 386 aa4.52□□□□□ -1.69
NF1-212ENST00000488981 PCDHGA11Q9Y5H2 935 aa4.52□□□□□ -1.69
NF1-212ENST00000488981 HRH3Q9Y5N1 445 aa4.52□□□□□ -1.69
NF1-212ENST00000488981 CDK2AP1O14519 115 aa4.51□□□□□ -1.69
NF1-212ENST00000488981 INHAP05111 366 aa4.51□□□□□ -1.69
NF1-212ENST00000488981 SLURP2P0DP57 97 aa4.51□□□□□ -1.69
NF1-212ENST00000488981 GTF2E1P29083 439 aaPredicted RBP4.51□□□□□ -1.69
NF1-212ENST00000488981 RAB15P59190 212 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms