RNA–Protein interactions for RNA: ENST00000488935.5

ERGIC3-217, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-217ENST00000488935 DOT1LQ8TEK3 1739 aa22.23■■□□□ 1.15
ERGIC3-217ENST00000488935 CARD14Q9BXL6 1004 aa22.22■■□□□ 1.15
ERGIC3-217ENST00000488935 MTFR1LQ9H019 292 aa22.21■■□□□ 1.15
ERGIC3-217ENST00000488935 KIF20BQ96Q89 1820 aa22.2■■□□□ 1.14
ERGIC3-217ENST00000488935 SGIP1Q9BQI5 828 aa22.2■■□□□ 1.14
ERGIC3-217ENST00000488935 SYT17Q9BSW7 474 aa22.2■■□□□ 1.14
ERGIC3-217ENST00000488935 DCAF8L1A6NGE4 600 aa22.19■■□□□ 1.14
ERGIC3-217ENST00000488935 POLR3GLQ9BT43 218 aa22.19■■□□□ 1.14
ERGIC3-217ENST00000488935 UTRNP46939 3433 aa22.18■■□□□ 1.14
ERGIC3-217ENST00000488935 NSD2O96028 1365 aa22.18■■□□□ 1.14
ERGIC3-217ENST00000488935 SLC24A1O60721 1099 aa22.18■■□□□ 1.14
ERGIC3-217ENST00000488935 AKT1S1Q96B36 256 aa22.18■■□□□ 1.14
ERGIC3-217ENST00000488935 EMILIN1Q9Y6C2 1016 aa22.18■■□□□ 1.14
ERGIC3-217ENST00000488935 TUBGCP6Q96RT7 1819 aa22.17■■□□□ 1.14
ERGIC3-217ENST00000488935 PPM1GO15355 546 aaPredicted RBP22.16■■□□□ 1.14
ERGIC3-217ENST00000488935 KLHL34Q8N239 644 aa22.16■■□□□ 1.14
ERGIC3-217ENST00000488935 NSD3Q9BZ95 1437 aa22.15■■□□□ 1.14
ERGIC3-217ENST00000488935 ARXQ96QS3 562 aa22.15■■□□□ 1.14
ERGIC3-217ENST00000488935 RTL1A6NKG5 1358 aa22.14■■□□□ 1.14
ERGIC3-217ENST00000488935 PNPLA7Q6ZV29 1317 aa22.14■■□□□ 1.14
ERGIC3-217ENST00000488935 RAPGEF4Q8WZA2 1011 aa22.14■■□□□ 1.13
ERGIC3-217ENST00000488935 TFCP2L1Q9NZI6 479 aa22.14■■□□□ 1.13
ERGIC3-217ENST00000488935 TATP17735 454 aaPredicted RBP22.13■■□□□ 1.13
ERGIC3-217ENST00000488935 SLC27A3Q5K4L6 730 aa22.12■■□□□ 1.13
ERGIC3-217ENST00000488935 LY75O60449 1722 aa22.11■■□□□ 1.13
ERGIC3-217ENST00000488935 CDCA8Q53HL2 280 aa22.11■■□□□ 1.13
ERGIC3-217ENST00000488935 CCNL1Q9UK58 526 aaPredicted RBP22.11■■□□□ 1.13
ERGIC3-217ENST00000488935 SMG6Q86US8 1419 aaKnown RBP22.11■■□□□ 1.13
ERGIC3-217ENST00000488935 INSRP06213 1382 aa22.11■■□□□ 1.13
ERGIC3-217ENST00000488935 FLT4P35916 1363 aa22.1■■□□□ 1.13
ERGIC3-217ENST00000488935 MSH5O43196 834 aa22.09■■□□□ 1.13
ERGIC3-217ENST00000488935 TNNT2P45379 298 aaPredicted RBP22.09■■□□□ 1.13
ERGIC3-217ENST00000488935 CYP27B1O15528 508 aa22.08■■□□□ 1.13
ERGIC3-217ENST00000488935 MPRIPQ6WCQ1 1025 aa22.08■■□□□ 1.13
ERGIC3-217ENST00000488935 MAP2P11137 1827 aaKnown RBP22.08■■□□□ 1.12
ERGIC3-217ENST00000488935 SMIM5Q71RC9 77 aa22.07■■□□□ 1.12
ERGIC3-217ENST00000488935 MSL1Q68DK7 614 aa22.06■■□□□ 1.12
ERGIC3-217ENST00000488935 COL23A1Q86Y22 540 aaPredicted RBP22.05■■□□□ 1.12
ERGIC3-217ENST00000488935 PELP1Q8IZL8 1130 aaKnown RBP22.05■■□□□ 1.12
ERGIC3-217ENST00000488935 QSER1Q2KHR3 1735 aa22.05■■□□□ 1.12
ERGIC3-217ENST00000488935 TOGARAM1Q9Y4F4 1720 aa22.04■■□□□ 1.12
ERGIC3-217ENST00000488935 CGNL1Q0VF96 1302 aa22.04■■□□□ 1.12
ERGIC3-217ENST00000488935 PCDH11XQ9BZA7 1347 aa22.04■■□□□ 1.12
ERGIC3-217ENST00000488935 PCDH11YQ9BZA8 1340 aa22.04■■□□□ 1.12
ERGIC3-217ENST00000488935 ITGB4P16144 1822 aa22.03■■□□□ 1.12
ERGIC3-217ENST00000488935 NLGN2Q8NFZ4 835 aa22.03■■□□□ 1.12
ERGIC3-217ENST00000488935 POLD1P28340 1107 aa22.02■■□□□ 1.12
ERGIC3-217ENST00000488935 GPR162Q16538 588 aa22.02■■□□□ 1.12
ERGIC3-217ENST00000488935 SLC16A10Q8TF71 515 aa22.02■■□□□ 1.12
ERGIC3-217ENST00000488935 EYA1Q99502 592 aa22.02■■□□□ 1.12
ERGIC3-217ENST00000488935 POLKQ9UBT6 870 aa22.01■■□□□ 1.11
ERGIC3-217ENST00000488935 HSPA5P11021 654 aaKnown RBP22■■□□□ 1.11
ERGIC3-217ENST00000488935 AMIGO3Q86WK7 504 aa22■■□□□ 1.11
ERGIC3-217ENST00000488935 ZNF784Q8NCA9 323 aaPredicted RBP22■■□□□ 1.11
ERGIC3-217ENST00000488935 PALLDQ8WX93 1383 aa21.99■■□□□ 1.11
ERGIC3-217ENST00000488935 PIGBQ92521 554 aa21.99■■□□□ 1.11
ERGIC3-217ENST00000488935 CHD4Q14839 1912 aa21.99■■□□□ 1.11
ERGIC3-217ENST00000488935 C5P01031 1676 aa21.98■■□□□ 1.11
ERGIC3-217ENST00000488935 COL24A1Q17RW2 1714 aa21.98■■□□□ 1.11
ERGIC3-217ENST00000488935 GOLGB1Q14789 3259 aaKnown RBP21.98■■□□□ 1.11
ERGIC3-217ENST00000488935 TIMELESSQ9UNS1 1208 aa21.98■■□□□ 1.11
ERGIC3-217ENST00000488935 TAF1LQ8IZX4 1826 aa21.98■■□□□ 1.11
ERGIC3-217ENST00000488935 WASHC2AQ641Q2 1341 aa21.98■■□□□ 1.11
ERGIC3-217ENST00000488935 KIF24Q5T7B8 1368 aa21.98■■□□□ 1.11
ERGIC3-217ENST00000488935 PKD1L3Q7Z443 1732 aa21.97■■□□□ 1.11
ERGIC3-217ENST00000488935 EIF4A2Q14240 407 aaKnown RBP21.96■■□□□ 1.11
ERGIC3-217ENST00000488935 PANK3Q9H999 370 aa21.96■■□□□ 1.11
ERGIC3-217ENST00000488935 ANKRD26Q9UPS8 1709 aa21.96■■□□□ 1.11
ERGIC3-217ENST00000488935 MAP3K5Q99683 1374 aa21.96■■□□□ 1.11
ERGIC3-217ENST00000488935 PHF14O94880 888 aa21.95■■□□□ 1.1
ERGIC3-217ENST00000488935 SPG7Q9UQ90 795 aa21.94■■□□□ 1.1
ERGIC3-217ENST00000488935 EIF4G2P78344 907 aaKnown RBP eCLIP21.93■■□□□ 1.1
ERGIC3-217ENST00000488935 NCAPD2Q15021 1401 aa21.93■■□□□ 1.1
ERGIC3-217ENST00000488935 CCER1Q8TC90 406 aaPredicted RBP21.93■■□□□ 1.1
ERGIC3-217ENST00000488935 ASAP1Q9ULH1 1129 aa21.93■■□□□ 1.1
ERGIC3-217ENST00000488935 WWC3Q9ULE0 1092 aa21.92■■□□□ 1.1
ERGIC3-217ENST00000488935 YBX3P16989 372 aaKnown RBP eCLIP21.91■■□□□ 1.18e-13■□□□□ 11.1
ERGIC3-217ENST00000488935 NKX1-1Q15270 411 aaPredicted RBP21.91■■□□□ 1.1
ERGIC3-217ENST00000488935 C4BP0C0L5 1744 aa21.91■■□□□ 1.1
ERGIC3-217ENST00000488935 CLSPNQ9HAW4 1339 aa21.9■■□□□ 1.1
ERGIC3-217ENST00000488935 PHKG2P15735 406 aa21.9■■□□□ 1.1
ERGIC3-217ENST00000488935 LINC00116Q8NCU8 138 aa21.9■■□□□ 1.1
ERGIC3-217ENST00000488935 AK7Q96M32 723 aa21.9■■□□□ 1.1
ERGIC3-217ENST00000488935 SMARCC1Q92922 1105 aaPredicted RBP21.89■■□□□ 1.09
ERGIC3-217ENST00000488935 TMOD3Q9NYL9 352 aa21.89■■□□□ 1.09
ERGIC3-217ENST00000488935 ITPK1Q13572 414 aa21.88■■□□□ 1.09
ERGIC3-217ENST00000488935 LOC102724428A0A0B4J2F2 783 aa21.87■■□□□ 1.09
ERGIC3-217ENST00000488935 SIK1P57059 783 aa21.87■■□□□ 1.09
ERGIC3-217ENST00000488935 IFNL2Q8IZJ0 200 aa21.87■■□□□ 1.09
ERGIC3-217ENST00000488935 UBR3Q6ZT12 1888 aa21.87■■□□□ 1.09
ERGIC3-217ENST00000488935 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.86■■□□□ 1.09
ERGIC3-217ENST00000488935 ATG3Q9NT62 314 aa21.86■■□□□ 1.09
ERGIC3-217ENST00000488935 ATP6V1AP38606 617 aa21.85■■□□□ 1.09
ERGIC3-217ENST00000488935 AEBP1Q8IUX7 1158 aa21.85■■□□□ 1.09
ERGIC3-217ENST00000488935 MORC1Q86VD1 984 aa21.83■■□□□ 1.09
ERGIC3-217ENST00000488935 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.83■■□□□ 1.09
ERGIC3-217ENST00000488935 IGSF1Q8N6C5 1336 aa21.82■■□□□ 1.08
ERGIC3-217ENST00000488935 GNPATO15228 680 aa21.82■■□□□ 1.08
ERGIC3-217ENST00000488935 FLAD1Q8NFF5 587 aa21.82■■□□□ 1.08
ERGIC3-217ENST00000488935 SLC4A9Q96Q91 983 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms