RNA–Protein interactions for RNA: ENST00000488914.1

CTNNB1-215, Transcript of catenin beta 1, humanhuman

TSL 2

Gene CTNNB1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-215ENST00000488914 MCCD1P59942 119 aaPredicted RBP10.14□□□□□ -0.79
CTNNB1-215ENST00000488914 RNF20Q5VTR2 975 aa10.14□□□□□ -0.79
CTNNB1-215ENST00000488914 PRICKLE2Q7Z3G6 844 aa10.14□□□□□ -0.79
CTNNB1-215ENST00000488914 OSBPL3Q9H4L5 887 aa10.14□□□□□ -0.79
CTNNB1-215ENST00000488914 GDPD2Q9HCC8 539 aa10.14□□□□□ -0.79
CTNNB1-215ENST00000488914 ZNF330Q9Y3S2 320 aaPredicted RBP10.14□□□□□ -0.79
CTNNB1-215ENST00000488914 MEN1O00255 615 aa10.13□□□□□ -0.79
CTNNB1-215ENST00000488914 RHOQP17081 205 aa10.13□□□□□ -0.79
CTNNB1-215ENST00000488914 ITGA6P23229 1130 aa10.12□□□□□ -0.79
CTNNB1-215ENST00000488914 RNF144AP50876 292 aaPredicted RBP10.12□□□□□ -0.79
CTNNB1-215ENST00000488914 LYSMD3Q7Z3D4 306 aa10.12□□□□□ -0.79
CTNNB1-215ENST00000488914 VWA5B2Q8N398 1253 aa10.12□□□□□ -0.79
CTNNB1-215ENST00000488914 TRAK2O60296 914 aa10.11□□□□□ -0.79
CTNNB1-215ENST00000488914 VAC14Q08AM6 782 aa10.11□□□□□ -0.79
CTNNB1-215ENST00000488914 NANOS1Q8WY41 292 aaKnown RBP10.11□□□□□ -0.79
CTNNB1-215ENST00000488914 CUEDC1Q9NWM3 386 aaPredicted RBP10.11□□□□□ -0.79
CTNNB1-215ENST00000488914 ABL2P42684 1182 aa10.1□□□□□ -0.79
CTNNB1-215ENST00000488914 RNFT1Q5M7Z0 435 aa10.1□□□□□ -0.79
CTNNB1-215ENST00000488914 CDC14CA4D256 554 aa10.09□□□□□ -0.79
CTNNB1-215ENST00000488914 MCM6Q14566 821 aa10.09□□□□□ -0.79
CTNNB1-215ENST00000488914 CCDC125Q86Z20 511 aa10.09□□□□□ -0.79
CTNNB1-215ENST00000488914 PHTF2Q8N3S3 785 aa10.09□□□□□ -0.79
CTNNB1-215ENST00000488914 CNTNAP3BQ96NU0 1288 aa10.09□□□□□ -0.79
CTNNB1-215ENST00000488914 COL25A1Q9BXS0 654 aaPredicted RBP10.09□□□□□ -0.79
CTNNB1-215ENST00000488914 CNTNAP3Q9BZ76 1288 aa10.09□□□□□ -0.79
CTNNB1-215ENST00000488914 ARHGEF10LQ9HCE6 1279 aa10.09□□□□□ -0.79
CTNNB1-215ENST00000488914 RAB6BQ9NRW1 208 aa10.09□□□□□ -0.79
CTNNB1-215ENST00000488914 CYP2U1Q7Z449 544 aa10.07□□□□□ -0.8
CTNNB1-215ENST00000488914 ZNF592Q92610 1267 aa10.07□□□□□ -0.8
CTNNB1-215ENST00000488914 STAU1O95793 577 aaKnown RBP10.06□□□□□ -0.8
CTNNB1-215ENST00000488914 EIF4G2P78344 907 aaKnown RBP eCLIP10.06□□□□□ -0.8
CTNNB1-215ENST00000488914 POU4F2Q12837 409 aa10.06□□□□□ -0.8
CTNNB1-215ENST00000488914 CLN3Q13286 438 aa10.06□□□□□ -0.8
CTNNB1-215ENST00000488914 GRIP2Q9C0E4 1043 aa10.06□□□□□ -0.8
CTNNB1-215ENST00000488914 PRM3Q9NNZ6 103 aa10.06□□□□□ -0.8
CTNNB1-215ENST00000488914 SV2AQ7L0J3 742 aa10.05□□□□□ -0.8
CTNNB1-215ENST00000488914 TRIM52Q96A61 297 aa10.05□□□□□ -0.8
CTNNB1-215ENST00000488914 NLRP3Q96P20 1036 aa10.05□□□□□ -0.8
CTNNB1-215ENST00000488914 IL2RAP01589 272 aa10.04□□□□□ -0.8
CTNNB1-215ENST00000488914 GPC1P35052 558 aa10.04□□□□□ -0.8
CTNNB1-215ENST00000488914 SLC27A3Q5K4L6 730 aa10.03□□□□□ -0.8
CTNNB1-215ENST00000488914 ESF1Q9H501 851 aaKnown RBP10.03□□□□□ -0.8
CTNNB1-215ENST00000488914 COG6Q9Y2V7 657 aa10.03□□□□□ -0.8
CTNNB1-215ENST00000488914 RNF135Q8IUD6 432 aa10.02□□□□□ -0.81
CTNNB1-215ENST00000488914 CNKSR1Q969H4 720 aa10.02□□□□□ -0.81
CTNNB1-215ENST00000488914 POM121Q96HA1 1249 aa10.02□□□□□ -0.81
CTNNB1-215ENST00000488914 FAM181BA6NEQ2 426 aa10.01□□□□□ -0.81
CTNNB1-215ENST00000488914 GNRH1P01148 92 aa10.01□□□□□ -0.81
CTNNB1-215ENST00000488914 SLFNL1Q499Z3 407 aa10.01□□□□□ -0.81
CTNNB1-215ENST00000488914 NBPF10Q6P3W6 841 aaKnown RBP10.01□□□□□ -0.81
CTNNB1-215ENST00000488914 NBPF15Q8N660 670 aa10.01□□□□□ -0.81
CTNNB1-215ENST00000488914 DOLKQ9UPQ8 538 aa10.01□□□□□ -0.81
CTNNB1-215ENST00000488914 MYCP01106 439 aaPredicted RBP10□□□□□ -0.81
CTNNB1-215ENST00000488914 CENPCQ03188 943 aa10□□□□□ -0.81
CTNNB1-215ENST00000488914 DBN1Q16643 649 aa10□□□□□ -0.81
CTNNB1-215ENST00000488914 OXLD1Q5BKU9 147 aa10□□□□□ -0.81
CTNNB1-215ENST00000488914 WHAMMQ8TF30 809 aa10□□□□□ -0.81
CTNNB1-215ENST00000488914 ESYT1Q9BSJ8 1104 aa10□□□□□ -0.81
CTNNB1-215ENST00000488914 CHIC2Q9UKJ5 165 aa10□□□□□ -0.81
CTNNB1-215ENST00000488914 HRH3Q9Y5N1 445 aa10□□□□□ -0.81
CTNNB1-215ENST00000488914 GAS6Q14393 721 aa9.99□□□□□ -0.81
CTNNB1-215ENST00000488914 RIPOR1Q6ZS17 1223 aa9.99□□□□□ -0.81
CTNNB1-215ENST00000488914 GAS2L1Q99501 681 aaPredicted RBP9.99□□□□□ -0.81
CTNNB1-215ENST00000488914 SPATA31C2B4DYI2 1134 aa9.98□□□□□ -0.81
CTNNB1-215ENST00000488914 GPR25O00155 361 aa9.98□□□□□ -0.81
CTNNB1-215ENST00000488914 WASHC4Q2M389 1173 aa9.98□□□□□ -0.81
CTNNB1-215ENST00000488914 ZNF837Q96EG3 531 aaPredicted RBP9.98□□□□□ -0.81
CTNNB1-215ENST00000488914 XAGE2Q96GT9 111 aa9.98□□□□□ -0.81
CTNNB1-215ENST00000488914 PIK3CDO00329 1044 aa9.97□□□□□ -0.81
CTNNB1-215ENST00000488914 FHDC1Q9C0D6 1143 aaPredicted RBP9.97□□□□□ -0.81
CTNNB1-215ENST00000488914 ETNK1Q9HBU6 452 aa9.97□□□□□ -0.81
CTNNB1-215ENST00000488914 DYRK1BQ9Y463 629 aa9.97□□□□□ -0.81
CTNNB1-215ENST00000488914 WASLO00401 505 aaPredicted RBP9.96□□□□□ -0.82
CTNNB1-215ENST00000488914 PHKA2P46019 1235 aa9.96□□□□□ -0.82
CTNNB1-215ENST00000488914 USP4Q13107 963 aa9.96□□□□□ -0.82
CTNNB1-215ENST00000488914 ZNF385CQ66K41 422 aaPredicted RBP9.96□□□□□ -0.82
CTNNB1-215ENST00000488914 TRIM22Q8IYM9 498 aa9.96□□□□□ -0.82
CTNNB1-215ENST00000488914 SLURP2P0DP57 97 aa9.95□□□□□ -0.82
CTNNB1-215ENST00000488914 SEMA3FQ13275 785 aa9.95□□□□□ -0.82
CTNNB1-215ENST00000488914 TAS1R3Q7RTX0 852 aa9.95□□□□□ -0.82
CTNNB1-215ENST00000488914 PLPP7Q8NBV4 271 aa9.95□□□□□ -0.82
CTNNB1-215ENST00000488914 TIMMDC1Q9NPL8 285 aa9.95□□□□□ -0.82
CTNNB1-215ENST00000488914 THBS1P07996 1170 aa9.94□□□□□ -0.82
CTNNB1-215ENST00000488914 ZSCAN10Q96SZ4 725 aaPredicted RBP9.94□□□□□ -0.82
CTNNB1-215ENST00000488914 GTPBP3Q969Y2 492 aaKnown RBP9.93□□□□□ -0.82
CTNNB1-215ENST00000488914 ADAMTS2O95450 1211 aa9.92□□□□□ -0.82
CTNNB1-215ENST00000488914 SCNN1DP51172 638 aa9.92□□□□□ -0.82
CTNNB1-215ENST00000488914 WDR44Q5JSH3 913 aa9.92□□□□□ -0.82
CTNNB1-215ENST00000488914 ALG2Q9H553 416 aa9.92□□□□□ -0.82
CTNNB1-215ENST00000488914 C4orf17Q53FE4 359 aa9.91□□□□□ -0.82
CTNNB1-215ENST00000488914 GPAMQ9HCL2 828 aa9.91□□□□□ -0.82
CTNNB1-215ENST00000488914 ADAMTS8Q9UP79 889 aa9.91□□□□□ -0.82
CTNNB1-215ENST00000488914 POM121CA8CG34 1229 aa9.9□□□□□ -0.82
CTNNB1-215ENST00000488914 F11P03951 625 aa9.9□□□□□ -0.82
CTNNB1-215ENST00000488914 SOX11P35716 441 aa9.9□□□□□ -0.82
CTNNB1-215ENST00000488914 ESCO1Q5FWF5 840 aa9.9□□□□□ -0.82
CTNNB1-215ENST00000488914 TMEM214Q6NUQ4 689 aaKnown RBP9.9□□□□□ -0.82
CTNNB1-215ENST00000488914 LYPD4Q6UWN0 246 aa9.9□□□□□ -0.82
CTNNB1-215ENST00000488914 SVOPQ8N4V2 548 aa9.9□□□□□ -0.82
CTNNB1-215ENST00000488914 ARHGEF15O94989 841 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms