RNA–Protein interactions for RNA: ENST00000488836.3

RN7SL28P-201, Transcript of RNA, 7SL, cytoplasmic 28, pseudogene, humanhuman

BASIC

Gene RN7SL28P, Length 298 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL28P-201ENST00000488836 ANKRD36BQ8N2N9 1353 aa12.01□□□□□ -0.49
RN7SL28P-201ENST00000488836 AMPHP49418 695 aa12□□□□□ -0.49
RN7SL28P-201ENST00000488836 ZNF827Q17R98 1081 aa12□□□□□ -0.49
RN7SL28P-201ENST00000488836 SYTL4Q96C24 671 aaPredicted RBP12□□□□□ -0.49
RN7SL28P-201ENST00000488836 LRRC4BQ9NT99 713 aa12□□□□□ -0.49
RN7SL28P-201ENST00000488836 TFCP2L1Q9NZI6 479 aa12□□□□□ -0.49
RN7SL28P-201ENST00000488836 CGNL1Q0VF96 1302 aa12□□□□□ -0.49
RN7SL28P-201ENST00000488836 GPR162Q16538 588 aa11.99□□□□□ -0.49
RN7SL28P-201ENST00000488836 AKT1S1Q96B36 256 aa11.99□□□□□ -0.49
RN7SL28P-201ENST00000488836 LTV1Q96GA3 475 aaPredicted RBP11.99□□□□□ -0.49
RN7SL28P-201ENST00000488836 RTL1A6NKG5 1358 aa11.99□□□□□ -0.49
RN7SL28P-201ENST00000488836 SMG6Q86US8 1419 aaKnown RBP11.98□□□□□ -0.49
RN7SL28P-201ENST00000488836 HOXC9P31274 260 aa11.98□□□□□ -0.49
RN7SL28P-201ENST00000488836 ZCRB1Q8TBF4 217 aaKnown RBP11.98□□□□□ -0.49
RN7SL28P-201ENST00000488836 MAP3K19Q56UN5 1328 aa11.97□□□□□ -0.49
RN7SL28P-201ENST00000488836 PRIM1P49642 420 aaKnown RBP11.97□□□□□ -0.49
RN7SL28P-201ENST00000488836 LY75O60449 1722 aa11.97□□□□□ -0.49
RN7SL28P-201ENST00000488836 USP47Q96K76 1375 aa11.96□□□□□ -0.49
RN7SL28P-201ENST00000488836 PNPLA7Q6ZV29 1317 aa11.96□□□□□ -0.49
RN7SL28P-201ENST00000488836 KLHL34Q8N239 644 aa11.96□□□□□ -0.49
RN7SL28P-201ENST00000488836 RAPGEF4Q8WZA2 1011 aa11.96□□□□□ -0.49
RN7SL28P-201ENST00000488836 COL24A1Q17RW2 1714 aa11.96□□□□□ -0.49
RN7SL28P-201ENST00000488836 DOT1LQ8TEK3 1739 aa11.96□□□□□ -0.49
RN7SL28P-201ENST00000488836 GOLGB1Q14789 3259 aaKnown RBP11.95□□□□□ -0.5
RN7SL28P-201ENST00000488836 ST20-MTHFSA0A0A6YYL1 179 aa11.95□□□□□ -0.5
RN7SL28P-201ENST00000488836 SLC4A2P04920 1241 aa11.95□□□□□ -0.5
RN7SL28P-201ENST00000488836 CDCA8Q53HL2 280 aa11.95□□□□□ -0.5
RN7SL28P-201ENST00000488836 TESK2Q96S53 571 aa11.95□□□□□ -0.5
RN7SL28P-201ENST00000488836 CCNL1Q9UK58 526 aaPredicted RBP11.95□□□□□ -0.5
RN7SL28P-201ENST00000488836 KIF24Q5T7B8 1368 aa11.94□□□□□ -0.5
RN7SL28P-201ENST00000488836 GRIN3BO60391 1043 aa11.94□□□□□ -0.5
RN7SL28P-201ENST00000488836 C1QTNF8P60827 252 aa11.94□□□□□ -0.5
RN7SL28P-201ENST00000488836 TMF1P82094 1093 aa11.94□□□□□ -0.5
RN7SL28P-201ENST00000488836 FLAD1Q8NFF5 587 aa11.94□□□□□ -0.5
RN7SL28P-201ENST00000488836 MEGF6O75095 1541 aa11.93□□□□□ -0.5
RN7SL28P-201ENST00000488836 TATP17735 454 aaPredicted RBP11.93□□□□□ -0.5
RN7SL28P-201ENST00000488836 PELP1Q8IZL8 1130 aaKnown RBP11.93□□□□□ -0.5
RN7SL28P-201ENST00000488836 NSD2O96028 1365 aa11.92□□□□□ -0.5
RN7SL28P-201ENST00000488836 PCDH11XQ9BZA7 1347 aa11.92□□□□□ -0.5
RN7SL28P-201ENST00000488836 PCDH11YQ9BZA8 1340 aa11.92□□□□□ -0.5
RN7SL28P-201ENST00000488836 SHANK3Q9BYB0 1731 aa11.92□□□□□ -0.5
RN7SL28P-201ENST00000488836 SENP3-EIF4A1A0A087X0R7 540 aa11.92□□□□□ -0.5
RN7SL28P-201ENST00000488836 GIGYF1O75420 1035 aaPredicted RBP11.92□□□□□ -0.5
RN7SL28P-201ENST00000488836 TUBGCP6Q96RT7 1819 aa11.92□□□□□ -0.5
RN7SL28P-201ENST00000488836 FYB1O15117 783 aa11.91□□□□□ -0.5
RN7SL28P-201ENST00000488836 NBPF6Q5VWK0 638 aa11.91□□□□□ -0.5
RN7SL28P-201ENST00000488836 NBPF4Q96M43 638 aa11.91□□□□□ -0.5
RN7SL28P-201ENST00000488836 RGPD2P0DJD1 1756 aa11.91□□□□□ -0.5
RN7SL28P-201ENST00000488836 INSRP06213 1382 aa11.91□□□□□ -0.5
RN7SL28P-201ENST00000488836 FLT4P35916 1363 aa11.91□□□□□ -0.5
RN7SL28P-201ENST00000488836 KCNQ4P56696 695 aa11.9□□□□□ -0.5
RN7SL28P-201ENST00000488836 RRS1Q15050 365 aaKnown RBP11.9□□□□□ -0.5
RN7SL28P-201ENST00000488836 SMARCC1Q92922 1105 aaPredicted RBP11.9□□□□□ -0.5
RN7SL28P-201ENST00000488836 NSD3Q9BZ95 1437 aa11.89□□□□□ -0.51
RN7SL28P-201ENST00000488836 GGNBP2Q9H3C7 697 aa11.89□□□□□ -0.51
RN7SL28P-201ENST00000488836 CD2APQ9Y5K6 639 aa11.89□□□□□ -0.51
RN7SL28P-201ENST00000488836 C5P01031 1676 aa11.89□□□□□ -0.51
RN7SL28P-201ENST00000488836 KIF20BQ96Q89 1820 aa11.88□□□□□ -0.51
RN7SL28P-201ENST00000488836 FBLN1P23142 703 aa11.88□□□□□ -0.51
RN7SL28P-201ENST00000488836 COL23A1Q86Y22 540 aaPredicted RBP11.88□□□□□ -0.51
RN7SL28P-201ENST00000488836 NLGN2Q8NFZ4 835 aa11.88□□□□□ -0.51
RN7SL28P-201ENST00000488836 PALLDQ8WX93 1383 aa11.88□□□□□ -0.51
RN7SL28P-201ENST00000488836 MPRIPQ6WCQ1 1025 aa11.87□□□□□ -0.51
RN7SL28P-201ENST00000488836 USHBP1Q8N6Y0 703 aa11.87□□□□□ -0.51
RN7SL28P-201ENST00000488836 HSP90AB2PQ58FF8 381 aa11.86□□□□□ -0.51
RN7SL28P-201ENST00000488836 AK7Q96M32 723 aa11.86□□□□□ -0.51
RN7SL28P-201ENST00000488836 SPG7Q9UQ90 795 aa11.86□□□□□ -0.51
RN7SL28P-201ENST00000488836 TAF1LQ8IZX4 1826 aa11.85□□□□□ -0.51
RN7SL28P-201ENST00000488836 YBX3P16989 372 aaKnown RBP eCLIP11.84□□□□□ -0.51
RN7SL28P-201ENST00000488836 MSL1Q68DK7 614 aa11.84□□□□□ -0.51
RN7SL28P-201ENST00000488836 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.84□□□□□ -0.51
RN7SL28P-201ENST00000488836 C4BP0C0L5 1744 aa11.83□□□□□ -0.52
RN7SL28P-201ENST00000488836 PKD1L3Q7Z443 1732 aa11.83□□□□□ -0.52
RN7SL28P-201ENST00000488836 CYP27B1O15528 508 aa11.83□□□□□ -0.52
RN7SL28P-201ENST00000488836 SSFA2P28290 1259 aa11.83□□□□□ -0.52
RN7SL28P-201ENST00000488836 NKX1-1Q15270 411 aaPredicted RBP11.83□□□□□ -0.52
RN7SL28P-201ENST00000488836 ITGB4P16144 1822 aa11.83□□□□□ -0.52
RN7SL28P-201ENST00000488836 PLEKHG2Q9H7P9 1386 aa11.82□□□□□ -0.52
RN7SL28P-201ENST00000488836 NCAPD2Q15021 1401 aa11.82□□□□□ -0.52
RN7SL28P-201ENST00000488836 WASHC2AQ641Q2 1341 aa11.82□□□□□ -0.52
RN7SL28P-201ENST00000488836 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.81□□□□□ -0.52
RN7SL28P-201ENST00000488836 PPM1GO15355 546 aaPredicted RBP11.81□□□□□ -0.52
RN7SL28P-201ENST00000488836 GPBP1L1Q9HC44 474 aaPredicted RBP11.81□□□□□ -0.52
RN7SL28P-201ENST00000488836 TMOD3Q9NYL9 352 aa11.81□□□□□ -0.52
RN7SL28P-201ENST00000488836 TIMELESSQ9UNS1 1208 aa11.81□□□□□ -0.52
RN7SL28P-201ENST00000488836 ANKRD26Q9UPS8 1709 aa11.8□□□□□ -0.52
RN7SL28P-201ENST00000488836 TOGARAM1Q9Y4F4 1720 aa11.8□□□□□ -0.52
RN7SL28P-201ENST00000488836 ATP10DQ9P241 1426 aa11.8□□□□□ -0.52
RN7SL28P-201ENST00000488836 LOC102724428A0A0B4J2F2 783 aa11.8□□□□□ -0.52
RN7SL28P-201ENST00000488836 MYCNP04198 464 aaPredicted RBP11.8□□□□□ -0.52
RN7SL28P-201ENST00000488836 SIK1P57059 783 aa11.8□□□□□ -0.52
RN7SL28P-201ENST00000488836 IFNL2Q8IZJ0 200 aa11.8□□□□□ -0.52
RN7SL28P-201ENST00000488836 PIGBQ92521 554 aa11.8□□□□□ -0.52
RN7SL28P-201ENST00000488836 EMILIN1Q9Y6C2 1016 aa11.8□□□□□ -0.52
RN7SL28P-201ENST00000488836 UBR3Q6ZT12 1888 aa11.8□□□□□ -0.52
RN7SL28P-201ENST00000488836 CEP350Q5VT06 3117 aa11.8□□□□□ -0.52
RN7SL28P-201ENST00000488836 PHF14O94880 888 aa11.79□□□□□ -0.52
RN7SL28P-201ENST00000488836 CARD14Q9BXL6 1004 aa11.78□□□□□ -0.52
RN7SL28P-201ENST00000488836 IGSF1Q8N6C5 1336 aa11.78□□□□□ -0.52
RN7SL28P-201ENST00000488836 GNPATO15228 680 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms