RNA–Protein interactions for RNA: ENST00000488723.1

CDK5RAP1-214, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 3

Gene CDK5RAP1, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-214ENST00000488723 LRRC37A3O60309 1634 aa22.82■■□□□ 1.24
CDK5RAP1-214ENST00000488723 U2SURPO15042 1029 aaKnown RBP22.82■■□□□ 1.24
CDK5RAP1-214ENST00000488723 AMOTQ4VCS5 1084 aa22.82■■□□□ 1.24
CDK5RAP1-214ENST00000488723 FAM196AQ6ZSG2 479 aa22.82■■□□□ 1.24
CDK5RAP1-214ENST00000488723 SPG7Q9UQ90 795 aa22.82■■□□□ 1.24
CDK5RAP1-214ENST00000488723 BCL9O00512 1426 aa22.82■■□□□ 1.24
CDK5RAP1-214ENST00000488723 FCHSD2O94868 740 aa22.81■■□□□ 1.24
CDK5RAP1-214ENST00000488723 PLEKHO1Q53GL0 409 aaPredicted RBP22.8■■□□□ 1.24
CDK5RAP1-214ENST00000488723 AEBP1Q8IUX7 1158 aa22.8■■□□□ 1.24
CDK5RAP1-214ENST00000488723 U2AF1L5P0DN76 240 aaPredicted RBP22.79■■□□□ 1.24
CDK5RAP1-214ENST00000488723 U2AF1Q01081 240 aaKnown RBP eCLIP22.79■■□□□ 1.24
CDK5RAP1-214ENST00000488723 MARCH10Q8NA82 808 aaPredicted RBP22.79■■□□□ 1.24
CDK5RAP1-214ENST00000488723 PNNQ9H307 717 aaKnown RBP22.79■■□□□ 1.24
CDK5RAP1-214ENST00000488723 EP400Q96L91 3159 aa22.79■■□□□ 1.24
CDK5RAP1-214ENST00000488723 PCDH11XQ9BZA7 1347 aa22.78■■□□□ 1.24
CDK5RAP1-214ENST00000488723 PCDH11YQ9BZA8 1340 aa22.78■■□□□ 1.24
CDK5RAP1-214ENST00000488723 HMOX1P09601 288 aa22.77■■□□□ 1.24
CDK5RAP1-214ENST00000488723 CCDC125Q86Z20 511 aa22.77■■□□□ 1.24
CDK5RAP1-214ENST00000488723 PKD1L3Q7Z443 1732 aa22.77■■□□□ 1.23
CDK5RAP1-214ENST00000488723 DIEXFQ68CQ4 756 aaKnown RBP22.76■■□□□ 1.23
CDK5RAP1-214ENST00000488723 RSPH6AQ9H0K4 717 aa22.75■■□□□ 1.23
CDK5RAP1-214ENST00000488723 NKX1-1Q15270 411 aaPredicted RBP22.74■■□□□ 1.23
CDK5RAP1-214ENST00000488723 IFNL2Q8IZJ0 200 aa22.74■■□□□ 1.23
CDK5RAP1-214ENST00000488723 DDX54Q8TDD1 881 aaKnown RBP22.74■■□□□ 1.23
CDK5RAP1-214ENST00000488723 CYP27B1O15528 508 aa22.72■■□□□ 1.23
CDK5RAP1-214ENST00000488723 SHANK3Q9BYB0 1731 aa22.71■■□□□ 1.23
CDK5RAP1-214ENST00000488723 HSP90AB1P08238 724 aaKnown RBP22.71■■□□□ 1.23
CDK5RAP1-214ENST00000488723 WDR43Q15061 677 aaKnown RBP eCLIP22.71■■□□□ 1.23
CDK5RAP1-214ENST00000488723 PRKAR2BP31323 418 aa22.7■■□□□ 1.22
CDK5RAP1-214ENST00000488723 FAM182BQ5T319 152 aa22.7■■□□□ 1.22
CDK5RAP1-214ENST00000488723 SOCS7O14512 581 aa22.69■■□□□ 1.22
CDK5RAP1-214ENST00000488723 NEFMP07197 916 aa22.69■■□□□ 1.22
CDK5RAP1-214ENST00000488723 PHKG2P15735 406 aa22.69■■□□□ 1.22
CDK5RAP1-214ENST00000488723 GAS2L2Q8NHY3 880 aa22.69■■□□□ 1.22
CDK5RAP1-214ENST00000488723 C1orf141Q5JVX7 400 aa22.68■■□□□ 1.22
CDK5RAP1-214ENST00000488723 ZNF530Q6P9A1 599 aaPredicted RBP22.68■■□□□ 1.22
CDK5RAP1-214ENST00000488723 UPF1Q92900 1129 aaKnown RBP eCLIP22.68■■□□□ 1.22
CDK5RAP1-214ENST00000488723 MRS2Q9HD23 443 aa22.68■■□□□ 1.22
CDK5RAP1-214ENST00000488723 KAT6BQ8WYB5 2073 aa22.67■■□□□ 1.22
CDK5RAP1-214ENST00000488723 AKAP4Q5JQC9 854 aa22.67■■□□□ 1.22
CDK5RAP1-214ENST00000488723 PLEKHF1Q96S99 279 aa22.67■■□□□ 1.22
CDK5RAP1-214ENST00000488723 CCER2I3L3R5 266 aa22.66■■□□□ 1.22
CDK5RAP1-214ENST00000488723 MTHFSDQ2M296 383 aaKnown RBP22.66■■□□□ 1.22
CDK5RAP1-214ENST00000488723 PNISRQ8TF01 805 aaKnown RBP22.66■■□□□ 1.22
CDK5RAP1-214ENST00000488723 DCAF5Q96JK2 942 aa22.66■■□□□ 1.22
CDK5RAP1-214ENST00000488723 BCL11BQ9C0K0 894 aaPredicted RBP22.66■■□□□ 1.22
CDK5RAP1-214ENST00000488723 ADAMTS8Q9UP79 889 aa22.66■■□□□ 1.22
CDK5RAP1-214ENST00000488723 SBF2Q86WG5 1849 aa22.66■■□□□ 1.22
CDK5RAP1-214ENST00000488723 CCDC184Q52MB2 194 aa22.65■■□□□ 1.22
CDK5RAP1-214ENST00000488723 PHACTR3Q96KR7 559 aa22.65■■□□□ 1.22
CDK5RAP1-214ENST00000488723 TRIM37O94972 964 aa22.63■■□□□ 1.21
CDK5RAP1-214ENST00000488723 SF3B2Q13435 895 aaKnown RBP22.63■■□□□ 1.21
CDK5RAP1-214ENST00000488723 ERVV-2B6SEH9 535 aa22.62■■□□□ 1.21
CDK5RAP1-214ENST00000488723 MAPK8IP3Q9UPT6 1336 aa22.61■■□□□ 1.21
CDK5RAP1-214ENST00000488723 HTATSF1O43719 755 aaKnown RBP22.61■■□□□ 1.21
CDK5RAP1-214ENST00000488723 RUNDC1Q96C34 613 aa22.61■■□□□ 1.21
CDK5RAP1-214ENST00000488723 GNAT3A8MTJ3 354 aa22.6■■□□□ 1.21
CDK5RAP1-214ENST00000488723 PRIM1P49642 420 aaKnown RBP22.59■■□□□ 1.21
CDK5RAP1-214ENST00000488723 NHSQ6T4R5 1651 aa22.58■■□□□ 1.21
CDK5RAP1-214ENST00000488723 PLSCR1O15162 318 aa22.58■■□□□ 1.21
CDK5RAP1-214ENST00000488723 ACSBG1Q96GR2 724 aa22.58■■□□□ 1.21
CDK5RAP1-214ENST00000488723 MAP3K5Q99683 1374 aa22.58■■□□□ 1.21
CDK5RAP1-214ENST00000488723 KCNQ2O43526 872 aa22.57■■□□□ 1.2
CDK5RAP1-214ENST00000488723 NFE2L2Q16236 605 aa22.57■■□□□ 1.2
CDK5RAP1-214ENST00000488723 BAG6P46379 1132 aa22.56■■□□□ 1.2
CDK5RAP1-214ENST00000488723 MPRIPQ6WCQ1 1025 aa22.56■■□□□ 1.2
CDK5RAP1-214ENST00000488723 RNMTO43148 476 aaKnown RBP22.55■■□□□ 1.2
CDK5RAP1-214ENST00000488723 APBA3O96018 575 aa22.55■■□□□ 1.2
CDK5RAP1-214ENST00000488723 KDM6AO15550 1401 aaPredicted RBP22.55■■□□□ 1.2
CDK5RAP1-214ENST00000488723 DOT1LQ8TEK3 1739 aa22.54■■□□□ 1.2
CDK5RAP1-214ENST00000488723 SCN11AQ9UI33 1791 aa22.54■■□□□ 1.2
CDK5RAP1-214ENST00000488723 RTF1Q92541 710 aaKnown RBP22.54■■□□□ 1.2
CDK5RAP1-214ENST00000488723 SYTL4Q96C24 671 aaPredicted RBP22.54■■□□□ 1.2
CDK5RAP1-214ENST00000488723 ADAMTS7Q9UKP4 1686 aa22.54■■□□□ 1.2
CDK5RAP1-214ENST00000488723 TNS1Q9HBL0 1735 aaKnown RBP22.54■■□□□ 1.2
CDK5RAP1-214ENST00000488723 NCBP3Q53F19 620 aaKnown RBP22.53■■□□□ 1.2
CDK5RAP1-214ENST00000488723 MIER1Q8N108 512 aa22.53■■□□□ 1.2
CDK5RAP1-214ENST00000488723 TMOD3Q9NYL9 352 aa22.53■■□□□ 1.2
CDK5RAP1-214ENST00000488723 ITGB4P16144 1822 aa22.52■■□□□ 1.2
CDK5RAP1-214ENST00000488723 TMPOP42166 694 aaKnown RBP22.52■■□□□ 1.2
CDK5RAP1-214ENST00000488723 CABP4P57796 275 aa22.52■■□□□ 1.2
CDK5RAP1-214ENST00000488723 PTF1AQ7RTS3 328 aa22.52■■□□□ 1.2
CDK5RAP1-214ENST00000488723 IL17REQ8NFR9 667 aa22.52■■□□□ 1.2
CDK5RAP1-214ENST00000488723 LGR6Q9HBX8 967 aa22.52■■□□□ 1.2
CDK5RAP1-214ENST00000488723 CEMIPQ8WUJ3 1361 aa22.51■■□□□ 1.19
CDK5RAP1-214ENST00000488723 TOGARAM1Q9Y4F4 1720 aa22.51■■□□□ 1.19
CDK5RAP1-214ENST00000488723 HMGB2P26583 209 aaKnown RBP22.51■■□□□ 1.19
CDK5RAP1-214ENST00000488723 LMOD3Q0VAK6 560 aa22.51■■□□□ 1.19
CDK5RAP1-214ENST00000488723 CCDC146Q8IYE0 955 aa22.51■■□□□ 1.19
CDK5RAP1-214ENST00000488723 PIGBQ92521 554 aa22.51■■□□□ 1.19
CDK5RAP1-214ENST00000488723 SMARCC1Q92922 1105 aaPredicted RBP22.51■■□□□ 1.19
CDK5RAP1-214ENST00000488723 SLC52A2Q9HAB3 445 aa22.51■■□□□ 1.19
CDK5RAP1-214ENST00000488723 RIPK4P57078 832 aa22.5■■□□□ 1.19
CDK5RAP1-214ENST00000488723 CAMKK2Q96RR4 588 aa22.5■■□□□ 1.19
CDK5RAP1-214ENST00000488723 RGPD3A6NKT7 1758 aaPredicted RBP22.5■■□□□ 1.19
CDK5RAP1-214ENST00000488723 RGPD4Q7Z3J3 1758 aa22.5■■□□□ 1.19
CDK5RAP1-214ENST00000488723 BTAF1O14981 1849 aa22.5■■□□□ 1.19
CDK5RAP1-214ENST00000488723 NFATC2IPQ8NCF5 419 aa22.49■■□□□ 1.19
CDK5RAP1-214ENST00000488723 MRC1P22897 1456 aa22.48■■□□□ 1.19
CDK5RAP1-214ENST00000488723 VIRMAQ69YN4 1812 aaKnown RBP22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms