RNA–Protein interactions for RNA: ENST00000488631.1

PDPN-206, Transcript of podoplanin, humanhuman

TSL 3

Gene PDPN, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-206ENST00000488631 LTN1O94822 1766 aa13.3□□□□□ -0.28
PDPN-206ENST00000488631 DDX10Q13206 875 aaKnown RBP13.29□□□□□ -0.28
PDPN-206ENST00000488631 ZCRB1Q8TBF4 217 aaKnown RBP13.29□□□□□ -0.28
PDPN-206ENST00000488631 SYTL4Q96C24 671 aaPredicted RBP13.29□□□□□ -0.28
PDPN-206ENST00000488631 COL18A1P39060 1754 aa13.29□□□□□ -0.28
PDPN-206ENST00000488631 USP54Q70EL1 1684 aa13.28□□□□□ -0.28
PDPN-206ENST00000488631 MTHFSP49914 203 aa13.28□□□□□ -0.28
PDPN-206ENST00000488631 EN1Q05925 392 aaPredicted RBP13.28□□□□□ -0.28
PDPN-206ENST00000488631 MARCH10Q8NA82 808 aaPredicted RBP13.28□□□□□ -0.28
PDPN-206ENST00000488631 ACSBG1Q96GR2 724 aa13.28□□□□□ -0.28
PDPN-206ENST00000488631 PER1O15534 1290 aaPredicted RBP13.27□□□□□ -0.29
PDPN-206ENST00000488631 EIF4A2Q14240 407 aaKnown RBP13.27□□□□□ -0.29
PDPN-206ENST00000488631 OVOS2A0A0G2JMS6 1433 aa13.27□□□□□ -0.29
PDPN-206ENST00000488631 CFAP53Q96M91 514 aa13.26□□□□□ -0.29
PDPN-206ENST00000488631 EYA1Q99502 592 aa13.26□□□□□ -0.29
PDPN-206ENST00000488631 RGPD5Q99666 1765 aa13.26□□□□□ -0.29
PDPN-206ENST00000488631 THSD7AQ9UPZ6 1657 aa13.25□□□□□ -0.29
PDPN-206ENST00000488631 U2SURPO15042 1029 aaKnown RBP13.25□□□□□ -0.29
PDPN-206ENST00000488631 SPG7Q9UQ90 795 aa13.25□□□□□ -0.29
PDPN-206ENST00000488631 BRWD3Q6RI45 1802 aa13.25□□□□□ -0.29
PDPN-206ENST00000488631 TNS2Q63HR2 1409 aa13.23□□□□□ -0.29
PDPN-206ENST00000488631 DIAPH1O60610 1272 aaKnown RBP13.23□□□□□ -0.29
PDPN-206ENST00000488631 BCL11BQ9C0K0 894 aaPredicted RBP13.23□□□□□ -0.29
PDPN-206ENST00000488631 DISP2A7MBM2 1401 aa13.22□□□□□ -0.29
PDPN-206ENST00000488631 EZH2Q15910 746 aaKnown RBP13.22□□□□□ -0.29
PDPN-206ENST00000488631 SULT6B1Q6IMI4 303 aa13.22□□□□□ -0.29
PDPN-206ENST00000488631 AKT1S1Q96B36 256 aa13.22□□□□□ -0.29
PDPN-206ENST00000488631 PCDH11XQ9BZA7 1347 aa13.21□□□□□ -0.29
PDPN-206ENST00000488631 PCDH11YQ9BZA8 1340 aa13.21□□□□□ -0.29
PDPN-206ENST00000488631 MKRN4PQ13434 485 aaPredicted RBP13.21□□□□□ -0.29
PDPN-206ENST00000488631 PLEKHO1Q53GL0 409 aaPredicted RBP13.21□□□□□ -0.29
PDPN-206ENST00000488631 PEAK1Q9H792 1746 aa13.2□□□□□ -0.3
PDPN-206ENST00000488631 KCNQ2O43526 872 aa13.2□□□□□ -0.3
PDPN-206ENST00000488631 HMOX1P09601 288 aa13.2□□□□□ -0.3
PDPN-206ENST00000488631 NBPF14Q5TI25 921 aa13.2□□□□□ -0.3
PDPN-206ENST00000488631 NUDCQ9Y266 331 aa13.2□□□□□ -0.3
PDPN-206ENST00000488631 NPC1L1Q9UHC9 1359 aa13.2□□□□□ -0.3
PDPN-206ENST00000488631 MEGF6O75095 1541 aa13.19□□□□□ -0.3
PDPN-206ENST00000488631 PRIM1P49642 420 aaKnown RBP13.19□□□□□ -0.3
PDPN-206ENST00000488631 C1orf141Q5JVX7 400 aa13.19□□□□□ -0.3
PDPN-206ENST00000488631 LRRC37A3O60309 1634 aa13.19□□□□□ -0.3
PDPN-206ENST00000488631 PARP4Q9UKK3 1724 aaKnown RBP13.19□□□□□ -0.3
PDPN-206ENST00000488631 ZNF316A6NFI3 1004 aaPredicted RBP13.18□□□□□ -0.3
PDPN-206ENST00000488631 PPP2R1AP30153 589 aa13.18□□□□□ -0.3
PDPN-206ENST00000488631 IL13P35225 146 aa13.18□□□□□ -0.3
PDPN-206ENST00000488631 MPRIPQ6WCQ1 1025 aa13.18□□□□□ -0.3
PDPN-206ENST00000488631 PTF1AQ7RTS3 328 aa13.18□□□□□ -0.3
PDPN-206ENST00000488631 AEBP1Q8IUX7 1158 aa13.18□□□□□ -0.3
PDPN-206ENST00000488631 ANKRD26Q9UPS8 1709 aa13.17□□□□□ -0.3
PDPN-206ENST00000488631 PSDA5PKW4 1024 aaPredicted RBP13.17□□□□□ -0.3
PDPN-206ENST00000488631 AMOTQ4VCS5 1084 aa13.17□□□□□ -0.3
PDPN-206ENST00000488631 ZNF530Q6P9A1 599 aaPredicted RBP13.17□□□□□ -0.3
PDPN-206ENST00000488631 POTEHQ6S545 545 aa13.17□□□□□ -0.3
PDPN-206ENST00000488631 IFNL2Q8IZJ0 200 aa13.17□□□□□ -0.3
PDPN-206ENST00000488631 FAM208AQ9UK61 1670 aaKnown RBP13.17□□□□□ -0.3
PDPN-206ENST00000488631 IGSF1Q8N6C5 1336 aa13.16□□□□□ -0.3
PDPN-206ENST00000488631 MAP2P11137 1827 aaKnown RBP13.16□□□□□ -0.3
PDPN-206ENST00000488631 NEFMP07197 916 aa13.16□□□□□ -0.3
PDPN-206ENST00000488631 U2AF1L5P0DN76 240 aaPredicted RBP13.16□□□□□ -0.3
PDPN-206ENST00000488631 U2AF1Q01081 240 aaKnown RBP eCLIP13.16□□□□□ -0.3
PDPN-206ENST00000488631 CAMKK2Q96RR4 588 aa13.16□□□□□ -0.3
PDPN-206ENST00000488631 R3HDM1Q15032 1099 aaKnown RBP13.15□□□□□ -0.3
PDPN-206ENST00000488631 RALBP1Q15311 655 aa13.15□□□□□ -0.3
PDPN-206ENST00000488631 RGPD1P0DJD0 1748 aa13.14□□□□□ -0.31
PDPN-206ENST00000488631 CYP27B1O15528 508 aa13.14□□□□□ -0.31
PDPN-206ENST00000488631 HSP90AB1P08238 724 aaKnown RBP13.14□□□□□ -0.31
PDPN-206ENST00000488631 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.14□□□□□ -0.31
PDPN-206ENST00000488631 TMOD3Q9NYL9 352 aa13.14□□□□□ -0.31
PDPN-206ENST00000488631 PARD3Q8TEW0 1356 aa13.13□□□□□ -0.31
PDPN-206ENST00000488631 SPDYE2BA6NHP3 402 aa13.13□□□□□ -0.31
PDPN-206ENST00000488631 PLSCR1O15162 318 aa13.13□□□□□ -0.31
PDPN-206ENST00000488631 SPDYE6P0CI01 402 aa13.13□□□□□ -0.31
PDPN-206ENST00000488631 PHKG2P15735 406 aa13.13□□□□□ -0.31
PDPN-206ENST00000488631 TXNRD1Q16881 649 aa13.13□□□□□ -0.31
PDPN-206ENST00000488631 SPDYE2Q495Y8 402 aa13.13□□□□□ -0.31
PDPN-206ENST00000488631 STK32BQ9NY57 414 aa13.13□□□□□ -0.31
PDPN-206ENST00000488631 RGPD2P0DJD1 1756 aa13.12□□□□□ -0.31
PDPN-206ENST00000488631 CABP4P57796 275 aa13.12□□□□□ -0.31
PDPN-206ENST00000488631 SRCAPQ6ZRS2 3230 aa13.12□□□□□ -0.31
PDPN-206ENST00000488631 BCL9O00512 1426 aa13.12□□□□□ -0.31
PDPN-206ENST00000488631 WNK3Q9BYP7 1800 aa13.11□□□□□ -0.31
PDPN-206ENST00000488631 REM2Q8IYK8 340 aaPredicted RBP13.11□□□□□ -0.31
PDPN-206ENST00000488631 PRKAR2BP31323 418 aa13.1□□□□□ -0.31
PDPN-206ENST00000488631 CHRDL2Q6WN34 429 aa13.1□□□□□ -0.31
PDPN-206ENST00000488631 DCAF5Q96JK2 942 aa13.1□□□□□ -0.31
PDPN-206ENST00000488631 CCNL1Q9UK58 526 aaPredicted RBP13.1□□□□□ -0.31
PDPN-206ENST00000488631 KCNQ4P56696 695 aa13.09□□□□□ -0.31
PDPN-206ENST00000488631 SMARCC1Q92922 1105 aaPredicted RBP13.09□□□□□ -0.31
PDPN-206ENST00000488631 KAT6BQ8WYB5 2073 aa13.09□□□□□ -0.31
PDPN-206ENST00000488631 GAS2L2Q8NHY3 880 aa13.08□□□□□ -0.32
PDPN-206ENST00000488631 PIGBQ92521 554 aa13.08□□□□□ -0.32
PDPN-206ENST00000488631 MYBBP1AQ9BQG0 1328 aaKnown RBP13.08□□□□□ -0.32
PDPN-206ENST00000488631 ANP32CO43423 234 aa13.07□□□□□ -0.32
PDPN-206ENST00000488631 WDR43Q15061 677 aaKnown RBP eCLIP13.07□□□□□ -0.32
PDPN-206ENST00000488631 NKX1-1Q15270 411 aaPredicted RBP13.07□□□□□ -0.32
PDPN-206ENST00000488631 MTHFSDQ2M296 383 aaKnown RBP13.07□□□□□ -0.32
PDPN-206ENST00000488631 AKAP4Q5JQC9 854 aa13.07□□□□□ -0.32
PDPN-206ENST00000488631 SLC27A3Q5K4L6 730 aa13.07□□□□□ -0.32
PDPN-206ENST00000488631 RTF1Q92541 710 aaKnown RBP13.07□□□□□ -0.32
PDPN-206ENST00000488631 PNNQ9H307 717 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms