RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 QSER1Q2KHR3 1735 aa26.76■■□□□ 1.87
GGPS1-206ENST00000488594 CGNL1Q0VF96 1302 aa26.75■■□□□ 1.87
GGPS1-206ENST00000488594 GPR162Q16538 588 aa26.74■■□□□ 1.87
GGPS1-206ENST00000488594 NSD2O96028 1365 aa26.74■■□□□ 1.87
GGPS1-206ENST00000488594 MEGF6O75095 1541 aa26.74■■□□□ 1.87
GGPS1-206ENST00000488594 FBLN1P23142 703 aa26.73■■□□□ 1.87
GGPS1-206ENST00000488594 SMG6Q86US8 1419 aaKnown RBP26.72■■□□□ 1.87
GGPS1-206ENST00000488594 CCNL1Q9UK58 526 aaPredicted RBP26.71■■□□□ 1.87
GGPS1-206ENST00000488594 CHD4Q14839 1912 aa26.71■■□□□ 1.87
GGPS1-206ENST00000488594 DOT1LQ8TEK3 1739 aa26.71■■□□□ 1.87
GGPS1-206ENST00000488594 KCNQ4P56696 695 aa26.71■■□□□ 1.87
GGPS1-206ENST00000488594 KLHL34Q8N239 644 aa26.71■■□□□ 1.87
GGPS1-206ENST00000488594 USP47Q96K76 1375 aa26.7■■□□□ 1.86
GGPS1-206ENST00000488594 FYB1O15117 783 aa26.7■■□□□ 1.86
GGPS1-206ENST00000488594 TMF1P82094 1093 aa26.7■■□□□ 1.86
GGPS1-206ENST00000488594 RRS1Q15050 365 aaKnown RBP26.7■■□□□ 1.86
GGPS1-206ENST00000488594 NBPF6Q5VWK0 638 aa26.7■■□□□ 1.86
GGPS1-206ENST00000488594 RAPGEF4Q8WZA2 1011 aa26.7■■□□□ 1.86
GGPS1-206ENST00000488594 NBPF4Q96M43 638 aa26.7■■□□□ 1.86
GGPS1-206ENST00000488594 COL24A1Q17RW2 1714 aa26.69■■□□□ 1.86
GGPS1-206ENST00000488594 HMGB2P26583 209 aaKnown RBP26.69■■□□□ 1.86
GGPS1-206ENST00000488594 LY75O60449 1722 aa26.68■■□□□ 1.86
GGPS1-206ENST00000488594 GGNBP2Q9H3C7 697 aa26.68■■□□□ 1.86
GGPS1-206ENST00000488594 SHANK3Q9BYB0 1731 aa26.67■■□□□ 1.86
GGPS1-206ENST00000488594 TATP17735 454 aaPredicted RBP26.65■■□□□ 1.86
GGPS1-206ENST00000488594 KIF24Q5T7B8 1368 aa26.65■■□□□ 1.86
GGPS1-206ENST00000488594 RGPD2P0DJD1 1756 aa26.64■■□□□ 1.86
GGPS1-206ENST00000488594 CDCA8Q53HL2 280 aa26.64■■□□□ 1.86
GGPS1-206ENST00000488594 INSRP06213 1382 aa26.64■■□□□ 1.85
GGPS1-206ENST00000488594 PCDH11XQ9BZA7 1347 aa26.63■■□□□ 1.85
GGPS1-206ENST00000488594 PCDH11YQ9BZA8 1340 aa26.63■■□□□ 1.85
GGPS1-206ENST00000488594 USHBP1Q8N6Y0 703 aa26.63■■□□□ 1.85
GGPS1-206ENST00000488594 MSH5O43196 834 aa26.62■■□□□ 1.85
GGPS1-206ENST00000488594 C1QTNF8P60827 252 aa26.62■■□□□ 1.85
GGPS1-206ENST00000488594 PELP1Q8IZL8 1130 aaKnown RBP26.62■■□□□ 1.85
GGPS1-206ENST00000488594 TUBGCP6Q96RT7 1819 aa26.62■■□□□ 1.85
GGPS1-206ENST00000488594 COL23A1Q86Y22 540 aaPredicted RBP26.61■■□□□ 1.85
GGPS1-206ENST00000488594 FLT4P35916 1363 aa26.61■■□□□ 1.85
GGPS1-206ENST00000488594 HSP90AB2PQ58FF8 381 aa26.6■■□□□ 1.85
GGPS1-206ENST00000488594 NLGN2Q8NFZ4 835 aa26.6■■□□□ 1.85
GGPS1-206ENST00000488594 GRIN3BO60391 1043 aa26.58■■□□□ 1.84
GGPS1-206ENST00000488594 FLAD1Q8NFF5 587 aa26.58■■□□□ 1.84
GGPS1-206ENST00000488594 SENP3-EIF4A1A0A087X0R7 540 aa26.57■■□□□ 1.84
GGPS1-206ENST00000488594 PALLDQ8WX93 1383 aa26.56■■□□□ 1.84
GGPS1-206ENST00000488594 MPRIPQ6WCQ1 1025 aa26.54■■□□□ 1.84
GGPS1-206ENST00000488594 GIGYF1O75420 1035 aaPredicted RBP26.53■■□□□ 1.84
GGPS1-206ENST00000488594 SMARCC1Q92922 1105 aaPredicted RBP26.53■■□□□ 1.84
GGPS1-206ENST00000488594 CYP27B1O15528 508 aa26.52■■□□□ 1.84
GGPS1-206ENST00000488594 C5P01031 1676 aa26.52■■□□□ 1.84
GGPS1-206ENST00000488594 KIF20BQ96Q89 1820 aa26.52■■□□□ 1.84
GGPS1-206ENST00000488594 YBX3P16989 372 aaKnown RBP eCLIP26.51■■□□□ 1.832e-7■■□□□ 13
GGPS1-206ENST00000488594 MSL1Q68DK7 614 aa26.51■■□□□ 1.83
GGPS1-206ENST00000488594 CD2APQ9Y5K6 639 aa26.51■■□□□ 1.83
GGPS1-206ENST00000488594 CARD14Q9BXL6 1004 aa26.49■■□□□ 1.83
GGPS1-206ENST00000488594 EMILIN1Q9Y6C2 1016 aa26.48■■□□□ 1.83
GGPS1-206ENST00000488594 GOLGB1Q14789 3259 aaKnown RBP26.48■■□□□ 1.83
GGPS1-206ENST00000488594 NCAPD2Q15021 1401 aa26.47■■□□□ 1.83
GGPS1-206ENST00000488594 NSD3Q9BZ95 1437 aa26.47■■□□□ 1.83
GGPS1-206ENST00000488594 AK7Q96M32 723 aa26.47■■□□□ 1.83
GGPS1-206ENST00000488594 SPG7Q9UQ90 795 aa26.47■■□□□ 1.83
GGPS1-206ENST00000488594 NKX1-1Q15270 411 aaPredicted RBP26.46■■□□□ 1.83
GGPS1-206ENST00000488594 PKD1L3Q7Z443 1732 aa26.44■■□□□ 1.82
GGPS1-206ENST00000488594 WASHC2AQ641Q2 1341 aa26.44■■□□□ 1.82
GGPS1-206ENST00000488594 PPM1GO15355 546 aaPredicted RBP26.44■■□□□ 1.82
GGPS1-206ENST00000488594 PIGBQ92521 554 aa26.44■■□□□ 1.82
GGPS1-206ENST00000488594 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.44■■□□□ 1.821e-6■□□□□ 8.4
GGPS1-206ENST00000488594 C4BP0C0L5 1744 aa26.43■■□□□ 1.82
GGPS1-206ENST00000488594 TAF1LQ8IZX4 1826 aa26.42■■□□□ 1.82
GGPS1-206ENST00000488594 TOGARAM1Q9Y4F4 1720 aa26.41■■□□□ 1.82
GGPS1-206ENST00000488594 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.4■■□□□ 1.82
GGPS1-206ENST00000488594 SSFA2P28290 1259 aa26.4■■□□□ 1.82
GGPS1-206ENST00000488594 LOC102724428A0A0B4J2F2 783 aa26.39■■□□□ 1.82
GGPS1-206ENST00000488594 SIK1P57059 783 aa26.39■■□□□ 1.82
GGPS1-206ENST00000488594 TMOD3Q9NYL9 352 aa26.39■■□□□ 1.82
GGPS1-206ENST00000488594 TIMELESSQ9UNS1 1208 aa26.39■■□□□ 1.82
GGPS1-206ENST00000488594 ITGB4P16144 1822 aa26.39■■□□□ 1.81
GGPS1-206ENST00000488594 PHF14O94880 888 aa26.38■■□□□ 1.81
GGPS1-206ENST00000488594 EYA1Q99502 592 aa26.38■■□□□ 1.81
GGPS1-206ENST00000488594 ANKRD26Q9UPS8 1709 aa26.38■■□□□ 1.81
GGPS1-206ENST00000488594 TRIM26Q12899 539 aaPredicted RBP26.37■■□□□ 1.81
GGPS1-206ENST00000488594 AMIGO3Q86WK7 504 aa26.37■■□□□ 1.81
GGPS1-206ENST00000488594 ATP10DQ9P241 1426 aa26.36■■□□□ 1.81
GGPS1-206ENST00000488594 PLEKHG2Q9H7P9 1386 aa26.35■■□□□ 1.81
GGPS1-206ENST00000488594 IFNL2Q8IZJ0 200 aa26.35■■□□□ 1.81
GGPS1-206ENST00000488594 LINC00116Q8NCU8 138 aa26.34■■□□□ 1.81
GGPS1-206ENST00000488594 POLKQ9UBT6 870 aa26.34■■□□□ 1.81
GGPS1-206ENST00000488594 PHKG2P15735 406 aa26.33■■□□□ 1.81
GGPS1-206ENST00000488594 UBR3Q6ZT12 1888 aa26.33■■□□□ 1.81
GGPS1-206ENST00000488594 ASAP1Q9ULH1 1129 aa26.33■■□□□ 1.8
GGPS1-206ENST00000488594 IGSF1Q8N6C5 1336 aa26.32■■□□□ 1.8
GGPS1-206ENST00000488594 GPBP1L1Q9HC44 474 aaPredicted RBP26.32■■□□□ 1.8
GGPS1-206ENST00000488594 MAP2P11137 1827 aaKnown RBP26.31■■□□□ 1.8
GGPS1-206ENST00000488594 GNPATO15228 680 aa26.31■■□□□ 1.8
GGPS1-206ENST00000488594 ATP6V1AP38606 617 aa26.31■■□□□ 1.8
GGPS1-206ENST00000488594 ADCY9O60503 1353 aa26.3■■□□□ 1.8
GGPS1-206ENST00000488594 SMIM5Q71RC9 77 aa26.3■■□□□ 1.8
GGPS1-206ENST00000488594 ITPK1Q13572 414 aa26.29■■□□□ 1.8
GGPS1-206ENST00000488594 EIF4A2Q14240 407 aaKnown RBP26.28■■□□□ 1.8
GGPS1-206ENST00000488594 ATG3Q9NT62 314 aa26.28■■□□□ 1.8
GGPS1-206ENST00000488594 HSP90AB1P08238 724 aaKnown RBP26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms