RNA–Protein interactions for RNA: ENST00000488536.1

UBA7-208, Transcript of ubiquitin like modifier activating enzyme 7, humanhuman

TSL 2

Gene UBA7, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA7-208ENST00000488536 USP19O94966 1318 aa17.78■□□□□ 0.44
UBA7-208ENST00000488536 MTHFSDQ2M296 383 aaKnown RBP17.78■□□□□ 0.44
UBA7-208ENST00000488536 TNNQ9UQP3 1299 aa17.78■□□□□ 0.44
UBA7-208ENST00000488536 FAM83GA6ND36 823 aa17.77■□□□□ 0.44
UBA7-208ENST00000488536 GNAT3A8MTJ3 354 aa17.77■□□□□ 0.44
UBA7-208ENST00000488536 SOX12O15370 315 aa17.77■□□□□ 0.44
UBA7-208ENST00000488536 TSPYL6Q8N831 410 aa17.77■□□□□ 0.44
UBA7-208ENST00000488536 C8orf58Q8NAV2 365 aa17.77■□□□□ 0.44
UBA7-208ENST00000488536 MAP3K5Q99683 1374 aa17.77■□□□□ 0.43
UBA7-208ENST00000488536 LTN1O94822 1766 aa17.76■□□□□ 0.43
UBA7-208ENST00000488536 NCAPD2Q15021 1401 aa17.76■□□□□ 0.43
UBA7-208ENST00000488536 SMC5Q8IY18 1101 aa17.76■□□□□ 0.43
UBA7-208ENST00000488536 LMTK3Q96Q04 1460 aa17.75■□□□□ 0.43
UBA7-208ENST00000488536 TRPM3Q9HCF6 1732 aaPredicted RBP17.75■□□□□ 0.43
UBA7-208ENST00000488536 MSH5O43196 834 aa17.75■□□□□ 0.43
UBA7-208ENST00000488536 C8orf34Q49A92 452 aa17.75■□□□□ 0.43
UBA7-208ENST00000488536 NOP58Q9Y2X3 529 aaKnown RBP17.75■□□□□ 0.43
UBA7-208ENST00000488536 ABCC6O95255 1503 aa17.74■□□□□ 0.43
UBA7-208ENST00000488536 ZBTB7BO15156 539 aaPredicted RBP17.74■□□□□ 0.43
UBA7-208ENST00000488536 ATF3P18847 181 aa17.74■□□□□ 0.43
UBA7-208ENST00000488536 RGS3P49796 1198 aa17.74■□□□□ 0.43
UBA7-208ENST00000488536 DCTN1Q14203 1278 aa17.74■□□□□ 0.43
UBA7-208ENST00000488536 INTS3Q68E01 1043 aaKnown RBP17.74■□□□□ 0.43
UBA7-208ENST00000488536 MCM10Q7L590 875 aa17.74■□□□□ 0.43
UBA7-208ENST00000488536 GCC1Q96CN9 775 aa17.74■□□□□ 0.43
UBA7-208ENST00000488536 ZBTB47Q9UFB7 747 aaPredicted RBP17.74■□□□□ 0.43
UBA7-208ENST00000488536 OVOS2A0A0G2JMS6 1433 aa17.73■□□□□ 0.43
UBA7-208ENST00000488536 AMOTQ4VCS5 1084 aa17.73■□□□□ 0.43
UBA7-208ENST00000488536 CADPS2Q86UW7 1296 aa17.73■□□□□ 0.43
UBA7-208ENST00000488536 PDZRN3Q9UPQ7 1066 aa17.73■□□□□ 0.43
UBA7-208ENST00000488536 VIRMAQ69YN4 1812 aaKnown RBP17.72■□□□□ 0.43
UBA7-208ENST00000488536 KRT28Q7Z3Y7 464 aa17.72■□□□□ 0.43
UBA7-208ENST00000488536 ARHGEF25Q86VW2 580 aa17.72■□□□□ 0.43
UBA7-208ENST00000488536 TSPYL4Q9UJ04 414 aa17.72■□□□□ 0.43
UBA7-208ENST00000488536 GCP02774 474 aa17.71■□□□□ 0.43
UBA7-208ENST00000488536 NUTM2GQ5VZR2 741 aa17.71■□□□□ 0.43
UBA7-208ENST00000488536 ORAI2Q96SN7 254 aa17.7■□□□□ 0.42
UBA7-208ENST00000488536 CAMTA1Q9Y6Y1 1673 aa17.7■□□□□ 0.42
UBA7-208ENST00000488536 MSH6P52701 1360 aa17.69■□□□□ 0.42
UBA7-208ENST00000488536 TMEM94Q12767 1356 aa17.69■□□□□ 0.42
UBA7-208ENST00000488536 FOXO3O43524 673 aa17.69■□□□□ 0.42
UBA7-208ENST00000488536 HOXB7P09629 217 aa17.69■□□□□ 0.42
UBA7-208ENST00000488536 TAF7Q15545 349 aaPredicted RBP17.69■□□□□ 0.42
UBA7-208ENST00000488536 PLEKHO1Q53GL0 409 aaPredicted RBP17.69■□□□□ 0.42
UBA7-208ENST00000488536 CEMIPQ8WUJ3 1361 aa17.68■□□□□ 0.42
UBA7-208ENST00000488536 ALS2Q96Q42 1657 aa17.68■□□□□ 0.42
UBA7-208ENST00000488536 ELL2O00472 640 aaPredicted RBP17.68■□□□□ 0.42
UBA7-208ENST00000488536 EIF5BO60841 1220 aaKnown RBP17.68■□□□□ 0.42
UBA7-208ENST00000488536 NPHP3Q7Z494 1330 aa17.68■□□□□ 0.42
UBA7-208ENST00000488536 MED1Q15648 1581 aaPredicted RBP17.67■□□□□ 0.42
UBA7-208ENST00000488536 NUCB1Q02818 461 aa17.67■□□□□ 0.42
UBA7-208ENST00000488536 CCDC30Q5VVM6 783 aa17.67■□□□□ 0.42
UBA7-208ENST00000488536 STK31Q9BXU1 1019 aa17.67■□□□□ 0.42
UBA7-208ENST00000488536 CCT4P50991 539 aaKnown RBP17.66■□□□□ 0.42
UBA7-208ENST00000488536 AKAP4Q5JQC9 854 aa17.66■□□□□ 0.42
UBA7-208ENST00000488536 UPF2Q9HAU5 1272 aaKnown RBP17.66■□□□□ 0.42
UBA7-208ENST00000488536 LMO7Q8WWI1 1683 aa17.65■□□□□ 0.42
UBA7-208ENST00000488536 RPAP2Q8IXW5 612 aaPredicted RBP17.65■□□□□ 0.42
UBA7-208ENST00000488536 RBM33Q96EV2 1170 aaKnown RBP17.65■□□□□ 0.42
UBA7-208ENST00000488536 RGS12O14924 1447 aa17.64■□□□□ 0.42
UBA7-208ENST00000488536 CACNA1FO60840 1977 aa17.64■□□□□ 0.41
UBA7-208ENST00000488536 NBPF6Q5VWK0 638 aa17.64■□□□□ 0.41
UBA7-208ENST00000488536 SKAP1Q86WV1 359 aa17.64■□□□□ 0.41
UBA7-208ENST00000488536 LTV1Q96GA3 475 aaPredicted RBP17.64■□□□□ 0.41
UBA7-208ENST00000488536 NBPF4Q96M43 638 aa17.64■□□□□ 0.41
UBA7-208ENST00000488536 IL17REQ8NFR9 667 aa17.63■□□□□ 0.41
UBA7-208ENST00000488536 PXDNLA1KZ92 1463 aa17.63■□□□□ 0.41
UBA7-208ENST00000488536 SLC4A2P04920 1241 aa17.62■□□□□ 0.41
UBA7-208ENST00000488536 NPM2Q86SE8 214 aaKnown RBP17.62■□□□□ 0.41
UBA7-208ENST00000488536 CHD1LQ86WJ1 897 aa17.62■□□□□ 0.41
UBA7-208ENST00000488536 TNS3Q68CZ2 1445 aa17.62■□□□□ 0.41
UBA7-208ENST00000488536 FAM208AQ9UK61 1670 aaKnown RBP17.61■□□□□ 0.41
UBA7-208ENST00000488536 ANKRD24Q8TF21 1146 aa17.61■□□□□ 0.41
UBA7-208ENST00000488536 STRCP1A6NGW2 1772 aa17.61■□□□□ 0.41
UBA7-208ENST00000488536 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.6■□□□□ 0.41
UBA7-208ENST00000488536 CPDO75976 1380 aa17.59■□□□□ 0.41
UBA7-208ENST00000488536 C1orf141Q5JVX7 400 aa17.59■□□□□ 0.41
UBA7-208ENST00000488536 ANKRD44Q8N8A2 993 aa17.59■□□□□ 0.41
UBA7-208ENST00000488536 DAXXQ9UER7 740 aaPredicted RBP17.59■□□□□ 0.41
UBA7-208ENST00000488536 HMMRO75330 724 aa17.58■□□□□ 0.4
UBA7-208ENST00000488536 ZNF530Q6P9A1 599 aaPredicted RBP17.58■□□□□ 0.4
UBA7-208ENST00000488536 PXDNQ92626 1479 aa17.57■□□□□ 0.4
UBA7-208ENST00000488536 ERBB3P21860 1342 aa17.57■□□□□ 0.4
UBA7-208ENST00000488536 TEFQ10587 303 aa17.57■□□□□ 0.4
UBA7-208ENST00000488536 KRT24Q2M2I5 525 aa17.57■□□□□ 0.4
UBA7-208ENST00000488536 LMOD2Q6P5Q4 547 aa17.57■□□□□ 0.4
UBA7-208ENST00000488536 DCTPP1Q9H773 170 aa17.57■□□□□ 0.4
UBA7-208ENST00000488536 KDM3BQ7LBC6 1761 aa17.56■□□□□ 0.4
UBA7-208ENST00000488536 N4BP2Q86UW6 1770 aaPredicted RBP17.56■□□□□ 0.4
UBA7-208ENST00000488536 SPATA31A3Q5VYP0 1347 aa17.56■□□□□ 0.4
UBA7-208ENST00000488536 ADAMTS7Q9UKP4 1686 aa17.56■□□□□ 0.4
UBA7-208ENST00000488536 GNAI3P08754 354 aa17.56■□□□□ 0.4
UBA7-208ENST00000488536 BMP2KLQ5H9B9 411 aa17.56■□□□□ 0.4
UBA7-208ENST00000488536 FLIIQ13045 1269 aa17.55■□□□□ 0.4
UBA7-208ENST00000488536 USHBP1Q8N6Y0 703 aa17.55■□□□□ 0.4
UBA7-208ENST00000488536 MIS18AQ9NYP9 233 aa17.55■□□□□ 0.4
UBA7-208ENST00000488536 ATP10DQ9P241 1426 aa17.55■□□□□ 0.4
UBA7-208ENST00000488536 RNMTO43148 476 aaKnown RBP17.54■□□□□ 0.4
UBA7-208ENST00000488536 XPCQ01831 940 aaPredicted RBP17.54■□□□□ 0.4
UBA7-208ENST00000488536 BECN1Q14457 450 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms