RNA–Protein interactions for RNA: ENST00000488522.1

TTC3-221, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-221ENST00000488522 SLC24A1O60721 1099 aa17.35■□□□□ 0.37
TTC3-221ENST00000488522 ZNF784Q8NCA9 323 aaPredicted RBP17.35■□□□□ 0.37
TTC3-221ENST00000488522 MAP3K19Q56UN5 1328 aa17.35■□□□□ 0.37
TTC3-221ENST00000488522 TONSLQ96HA7 1378 aa17.34■□□□□ 0.37
TTC3-221ENST00000488522 RGPD2P0DJD1 1756 aa17.33■□□□□ 0.37
TTC3-221ENST00000488522 MEGF6O75095 1541 aa17.33■□□□□ 0.37
TTC3-221ENST00000488522 HOXC9P31274 260 aa17.33■□□□□ 0.36
TTC3-221ENST00000488522 PNPLA7Q6ZV29 1317 aa17.32■□□□□ 0.36
TTC3-221ENST00000488522 COG3Q96JB2 828 aa17.31■□□□□ 0.36
TTC3-221ENST00000488522 CGNL1Q0VF96 1302 aa17.29■□□□□ 0.36
TTC3-221ENST00000488522 ST20-MTHFSA0A0A6YYL1 179 aa17.29■□□□□ 0.36
TTC3-221ENST00000488522 DDX54Q8TDD1 881 aaKnown RBP17.29■□□□□ 0.36
TTC3-221ENST00000488522 PRIM1P49642 420 aaKnown RBP17.27■□□□□ 0.36
TTC3-221ENST00000488522 ZCRB1Q8TBF4 217 aaKnown RBP17.27■□□□□ 0.36
TTC3-221ENST00000488522 LTV1Q96GA3 475 aaPredicted RBP17.27■□□□□ 0.36
TTC3-221ENST00000488522 GOLGB1Q14789 3259 aaKnown RBP17.27■□□□□ 0.36
TTC3-221ENST00000488522 KIF24Q5T7B8 1368 aa17.27■□□□□ 0.35
TTC3-221ENST00000488522 POLD1P28340 1107 aa17.26■□□□□ 0.35
TTC3-221ENST00000488522 AMPHP49418 695 aa17.26■□□□□ 0.35
TTC3-221ENST00000488522 KIF20BQ96Q89 1820 aa17.25■□□□□ 0.35
TTC3-221ENST00000488522 SMG6Q86US8 1419 aaKnown RBP17.24■□□□□ 0.35
TTC3-221ENST00000488522 C5P01031 1676 aa17.24■□□□□ 0.35
TTC3-221ENST00000488522 FYB1O15117 783 aa17.24■□□□□ 0.35
TTC3-221ENST00000488522 FBLN1P23142 703 aa17.24■□□□□ 0.35
TTC3-221ENST00000488522 NBPF6Q5VWK0 638 aa17.24■□□□□ 0.35
TTC3-221ENST00000488522 NBPF4Q96M43 638 aa17.24■□□□□ 0.35
TTC3-221ENST00000488522 TFCP2L1Q9NZI6 479 aa17.24■□□□□ 0.35
TTC3-221ENST00000488522 INSRP06213 1382 aa17.24■□□□□ 0.35
TTC3-221ENST00000488522 NCAPD2Q15021 1401 aa17.23■□□□□ 0.35
TTC3-221ENST00000488522 SYTL4Q96C24 671 aaPredicted RBP17.23■□□□□ 0.35
TTC3-221ENST00000488522 PKD1L3Q7Z443 1732 aa17.23■□□□□ 0.35
TTC3-221ENST00000488522 TAF1LQ8IZX4 1826 aa17.23■□□□□ 0.35
TTC3-221ENST00000488522 ANKRD26Q9UPS8 1709 aa17.22■□□□□ 0.35
TTC3-221ENST00000488522 CCNL1Q9UK58 526 aaPredicted RBP17.22■□□□□ 0.35
TTC3-221ENST00000488522 USP47Q96K76 1375 aa17.22■□□□□ 0.35
TTC3-221ENST00000488522 FLT4P35916 1363 aa17.21■□□□□ 0.35
TTC3-221ENST00000488522 KCNQ4P56696 695 aa17.21■□□□□ 0.35
TTC3-221ENST00000488522 RRS1Q15050 365 aaKnown RBP17.21■□□□□ 0.35
TTC3-221ENST00000488522 TOGARAM1Q9Y4F4 1720 aa17.21■□□□□ 0.35
TTC3-221ENST00000488522 HMGB2P26583 209 aaKnown RBP17.2■□□□□ 0.34
TTC3-221ENST00000488522 C1QTNF8P60827 252 aa17.2■□□□□ 0.34
TTC3-221ENST00000488522 TMF1P82094 1093 aa17.2■□□□□ 0.34
TTC3-221ENST00000488522 GPR162Q16538 588 aa17.2■□□□□ 0.34
TTC3-221ENST00000488522 PCDH11XQ9BZA7 1347 aa17.2■□□□□ 0.34
TTC3-221ENST00000488522 PCDH11YQ9BZA8 1340 aa17.2■□□□□ 0.34
TTC3-221ENST00000488522 NLGN2Q8NFZ4 835 aa17.19■□□□□ 0.34
TTC3-221ENST00000488522 RAPGEF4Q8WZA2 1011 aa17.19■□□□□ 0.34
TTC3-221ENST00000488522 GGNBP2Q9H3C7 697 aa17.19■□□□□ 0.34
TTC3-221ENST00000488522 COL23A1Q86Y22 540 aaPredicted RBP17.18■□□□□ 0.34
TTC3-221ENST00000488522 ITGB4P16144 1822 aa17.18■□□□□ 0.34
TTC3-221ENST00000488522 TATP17735 454 aaPredicted RBP17.17■□□□□ 0.34
TTC3-221ENST00000488522 PALLDQ8WX93 1383 aa17.16■□□□□ 0.34
TTC3-221ENST00000488522 C4BP0C0L5 1744 aa17.16■□□□□ 0.34
TTC3-221ENST00000488522 HSP90AB2PQ58FF8 381 aa17.16■□□□□ 0.34
TTC3-221ENST00000488522 USHBP1Q8N6Y0 703 aa17.16■□□□□ 0.34
TTC3-221ENST00000488522 MAP2P11137 1827 aaKnown RBP17.16■□□□□ 0.34
TTC3-221ENST00000488522 CYP27B1O15528 508 aa17.15■□□□□ 0.34
TTC3-221ENST00000488522 CDCA8Q53HL2 280 aa17.15■□□□□ 0.34
TTC3-221ENST00000488522 FLAD1Q8NFF5 587 aa17.15■□□□□ 0.34
TTC3-221ENST00000488522 UBR3Q6ZT12 1888 aa17.15■□□□□ 0.34
TTC3-221ENST00000488522 GRIN3BO60391 1043 aa17.14■□□□□ 0.33
TTC3-221ENST00000488522 KLHL34Q8N239 644 aa17.14■□□□□ 0.33
TTC3-221ENST00000488522 YBX3P16989 372 aaKnown RBP eCLIP17.13■□□□□ 0.33
TTC3-221ENST00000488522 NKX1-1Q15270 411 aaPredicted RBP17.13■□□□□ 0.33
TTC3-221ENST00000488522 CD2APQ9Y5K6 639 aa17.13■□□□□ 0.33
TTC3-221ENST00000488522 PLEKHG2Q9H7P9 1386 aa17.13■□□□□ 0.33
TTC3-221ENST00000488522 NSD3Q9BZ95 1437 aa17.13■□□□□ 0.33
TTC3-221ENST00000488522 SENP3-EIF4A1A0A087X0R7 540 aa17.12■□□□□ 0.33
TTC3-221ENST00000488522 GIGYF1O75420 1035 aaPredicted RBP17.12■□□□□ 0.33
TTC3-221ENST00000488522 CARD14Q9BXL6 1004 aa17.12■□□□□ 0.33
TTC3-221ENST00000488522 SMARCC1Q92922 1105 aaPredicted RBP17.11■□□□□ 0.33
TTC3-221ENST00000488522 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.1■□□□□ 0.337e-9■■■□□ 18.7
TTC3-221ENST00000488522 ADCY9O60503 1353 aa17.1■□□□□ 0.33
TTC3-221ENST00000488522 CEP350Q5VT06 3117 aa17.1■□□□□ 0.33
TTC3-221ENST00000488522 PELP1Q8IZL8 1130 aaKnown RBP17.09■□□□□ 0.33
TTC3-221ENST00000488522 EMILIN1Q9Y6C2 1016 aa17.09■□□□□ 0.33
TTC3-221ENST00000488522 WASHC2AQ641Q2 1341 aa17.09■□□□□ 0.33
TTC3-221ENST00000488522 MSL1Q68DK7 614 aa17.08■□□□□ 0.32
TTC3-221ENST00000488522 MPRIPQ6WCQ1 1025 aa17.08■□□□□ 0.32
TTC3-221ENST00000488522 ZNF831Q5JPB2 1677 aa17.07■□□□□ 0.32
TTC3-221ENST00000488522 AMIGO3Q86WK7 504 aa17.07■□□□□ 0.32
TTC3-221ENST00000488522 PIGBQ92521 554 aa17.07■□□□□ 0.32
TTC3-221ENST00000488522 SSFA2P28290 1259 aa17.06■□□□□ 0.32
TTC3-221ENST00000488522 CICQ96RK0 1608 aaPredicted RBP17.06■□□□□ 0.32
TTC3-221ENST00000488522 ATP10DQ9P241 1426 aa17.05■□□□□ 0.32
TTC3-221ENST00000488522 AK7Q96M32 723 aa17.05■□□□□ 0.32
TTC3-221ENST00000488522 SPG7Q9UQ90 795 aa17.05■□□□□ 0.32
TTC3-221ENST00000488522 TIMELESSQ9UNS1 1208 aa17.04■□□□□ 0.32
TTC3-221ENST00000488522 KIF13BQ9NQT8 1826 aa17.04■□□□□ 0.32
TTC3-221ENST00000488522 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.03■□□□□ 0.32
TTC3-221ENST00000488522 LOC102724428A0A0B4J2F2 783 aa17.03■□□□□ 0.32
TTC3-221ENST00000488522 SIK1P57059 783 aa17.03■□□□□ 0.32
TTC3-221ENST00000488522 EYA1Q99502 592 aa17.03■□□□□ 0.32
TTC3-221ENST00000488522 KDRP35968 1356 aa17.02■□□□□ 0.32
TTC3-221ENST00000488522 LINC00116Q8NCU8 138 aa17.02■□□□□ 0.32
TTC3-221ENST00000488522 KIAA1551Q9HCM1 1747 aa17.01■□□□□ 0.31
TTC3-221ENST00000488522 PHKG2P15735 406 aa17.01■□□□□ 0.31
TTC3-221ENST00000488522 POLKQ9UBT6 870 aa17.01■□□□□ 0.31
TTC3-221ENST00000488522 IGSF1Q8N6C5 1336 aa17■□□□□ 0.31
TTC3-221ENST00000488522 IFNL2Q8IZJ0 200 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms