RNA–Protein interactions for RNA: ENST00000488489.5

NECAB3-213, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 2,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-213ENST00000488489 CRB1P82279 1406 aa26.03■■□□□ 1.76
NECAB3-213ENST00000488489 CRYBG1Q9Y4K1 1723 aa26.02■■□□□ 1.76
NECAB3-213ENST00000488489 CHL1O00533 1208 aa26.02■■□□□ 1.76
NECAB3-213ENST00000488489 VAMP4O75379 141 aa26.02■■□□□ 1.76
NECAB3-213ENST00000488489 RLBP1P12271 317 aa26.01■■□□□ 1.75
NECAB3-213ENST00000488489 RTF1Q92541 710 aaKnown RBP26.01■■□□□ 1.75
NECAB3-213ENST00000488489 C8orf58Q8NAV2 365 aa26■■□□□ 1.75
NECAB3-213ENST00000488489 ELL2O00472 640 aaPredicted RBP26■■□□□ 1.75
NECAB3-213ENST00000488489 NCAPD2Q15021 1401 aa25.99■■□□□ 1.75
NECAB3-213ENST00000488489 ERBB3P21860 1342 aa25.99■■□□□ 1.75
NECAB3-213ENST00000488489 COG6Q9Y2V7 657 aa25.99■■□□□ 1.75
NECAB3-213ENST00000488489 GNAT3A8MTJ3 354 aa25.99■■□□□ 1.75
NECAB3-213ENST00000488489 COL18A1P39060 1754 aa25.98■■□□□ 1.75
NECAB3-213ENST00000488489 HTATSF1O43719 755 aaKnown RBP25.97■■□□□ 1.75
NECAB3-213ENST00000488489 ALDH1L2Q3SY69 923 aa25.97■■□□□ 1.75
NECAB3-213ENST00000488489 CLUAP1Q96AJ1 413 aa25.97■■□□□ 1.75
NECAB3-213ENST00000488489 CHRNA2Q15822 529 aa25.96■■□□□ 1.75
NECAB3-213ENST00000488489 TWISTNBQ3B726 338 aaPredicted RBP25.96■■□□□ 1.75
NECAB3-213ENST00000488489 ZKSCAN2Q63HK3 967 aa25.96■■□□□ 1.75
NECAB3-213ENST00000488489 ZNF428Q96B54 188 aa25.96■■□□□ 1.75
NECAB3-213ENST00000488489 MIS18AQ9NYP9 233 aa25.96■■□□□ 1.75
NECAB3-213ENST00000488489 MAP3K5Q99683 1374 aa25.95■■□□□ 1.75
NECAB3-213ENST00000488489 CAMTA1Q9Y6Y1 1673 aa25.95■■□□□ 1.74
NECAB3-213ENST00000488489 IL17REQ8NFR9 667 aa25.95■■□□□ 1.74
NECAB3-213ENST00000488489 NOB1Q9ULX3 412 aaKnown RBP25.95■■□□□ 1.74
NECAB3-213ENST00000488489 KIAA0232Q92628 1395 aa25.95■■□□□ 1.74
NECAB3-213ENST00000488489 KRT24Q2M2I5 525 aa25.94■■□□□ 1.74
NECAB3-213ENST00000488489 TRIM27P14373 513 aa25.93■■□□□ 1.74
NECAB3-213ENST00000488489 CPDO75976 1380 aa25.93■■□□□ 1.74
NECAB3-213ENST00000488489 LRRC37A3O60309 1634 aa25.92■■□□□ 1.74
NECAB3-213ENST00000488489 NHSL1Q5SYE7 1610 aa25.92■■□□□ 1.74
NECAB3-213ENST00000488489 BRPF1P55201 1214 aaPredicted RBP25.91■■□□□ 1.74
NECAB3-213ENST00000488489 LTBP4Q8N2S1 1624 aa25.91■■□□□ 1.74
NECAB3-213ENST00000488489 LMO7Q8WWI1 1683 aa25.91■■□□□ 1.74
NECAB3-213ENST00000488489 ATF7IPQ6VMQ6 1270 aa25.91■■□□□ 1.74
NECAB3-213ENST00000488489 TCERG1O14776 1098 aaKnown RBP25.9■■□□□ 1.74
NECAB3-213ENST00000488489 DZIP1LQ8IYY4 767 aaKnown RBP25.9■■□□□ 1.74
NECAB3-213ENST00000488489 MRPL50Q8N5N7 158 aaKnown RBP25.9■■□□□ 1.74
NECAB3-213ENST00000488489 KIF16BQ96L93 1317 aa25.89■■□□□ 1.74
NECAB3-213ENST00000488489 TSPYL4Q9UJ04 414 aa25.89■■□□□ 1.74
NECAB3-213ENST00000488489 PLEKHO1Q53GL0 409 aaPredicted RBP25.88■■□□□ 1.73
NECAB3-213ENST00000488489 NLRP2Q9NX02 1062 aa25.88■■□□□ 1.73
NECAB3-213ENST00000488489 FTSJ3Q8IY81 847 aaKnown RBP25.87■■□□□ 1.73
NECAB3-213ENST00000488489 KDM2BQ8NHM5 1336 aa25.87■■□□□ 1.73
NECAB3-213ENST00000488489 ABCC6O95255 1503 aa25.87■■□□□ 1.73
NECAB3-213ENST00000488489 AMOTQ4VCS5 1084 aa25.86■■□□□ 1.73
NECAB3-213ENST00000488489 ZNF530Q6P9A1 599 aaPredicted RBP25.86■■□□□ 1.73
NECAB3-213ENST00000488489 LGR6Q9HBX8 967 aa25.86■■□□□ 1.73
NECAB3-213ENST00000488489 CEMIPQ8WUJ3 1361 aa25.86■■□□□ 1.73
NECAB3-213ENST00000488489 IPO8O15397 1037 aaKnown RBP25.85■■□□□ 1.73
NECAB3-213ENST00000488489 MVPQ14764 893 aaKnown RBP25.85■■□□□ 1.73
NECAB3-213ENST00000488489 ERICH6Q7L0X2 663 aa25.85■■□□□ 1.73
NECAB3-213ENST00000488489 MS4A1P11836 297 aa25.84■■□□□ 1.73
NECAB3-213ENST00000488489 AKAP4Q5JQC9 854 aa25.84■■□□□ 1.73
NECAB3-213ENST00000488489 FAM208AQ9UK61 1670 aaKnown RBP25.84■■□□□ 1.73
NECAB3-213ENST00000488489 CSB-PGBD3P0DP91 1061 aa25.84■■□□□ 1.73
NECAB3-213ENST00000488489 PRDM11Q9NQV5 511 aa25.84■■□□□ 1.73
NECAB3-213ENST00000488489 TAF7Q15545 349 aaPredicted RBP25.83■■□□□ 1.73
NECAB3-213ENST00000488489 ABCA3Q99758 1704 aa25.83■■□□□ 1.73
NECAB3-213ENST00000488489 ROBO1Q9Y6N7 1651 aa25.81■■□□□ 1.72
NECAB3-213ENST00000488489 HAP1P54257 671 aaPredicted RBP25.81■■□□□ 1.72
NECAB3-213ENST00000488489 MPRIPQ6WCQ1 1025 aa25.81■■□□□ 1.72
NECAB3-213ENST00000488489 TMEM57Q8N5G2 664 aa25.81■■□□□ 1.72
NECAB3-213ENST00000488489 ARHGAP45Q92619 1136 aa25.8■■□□□ 1.72
NECAB3-213ENST00000488489 CENPQQ7L2Z9 268 aaPredicted RBP25.79■■□□□ 1.72
NECAB3-213ENST00000488489 RAPGEF4Q8WZA2 1011 aa25.79■■□□□ 1.72
NECAB3-213ENST00000488489 MEGF6O75095 1541 aa25.78■■□□□ 1.72
NECAB3-213ENST00000488489 IGHDP01880 384 aa25.78■■□□□ 1.72
NECAB3-213ENST00000488489 AAMPQ13685 434 aa25.78■■□□□ 1.72
NECAB3-213ENST00000488489 C1orf141Q5JVX7 400 aa25.78■■□□□ 1.72
NECAB3-213ENST00000488489 ITPRIPQ8IWB1 547 aa25.78■■□□□ 1.72
NECAB3-213ENST00000488489 BABAM1Q9NWV8 329 aa25.78■■□□□ 1.72
NECAB3-213ENST00000488489 PCDHB15Q9Y5E8 787 aa25.78■■□□□ 1.72
NECAB3-213ENST00000488489 SKAP1Q86WV1 359 aa25.77■■□□□ 1.72
NECAB3-213ENST00000488489 RNMTO43148 476 aaKnown RBP25.76■■□□□ 1.71
NECAB3-213ENST00000488489 DDX19BQ9UMR2 479 aa25.75■■□□□ 1.71
NECAB3-213ENST00000488489 TATP17735 454 aaPredicted RBP25.75■■□□□ 1.71
NECAB3-213ENST00000488489 VIRMAQ69YN4 1812 aaKnown RBP25.75■■□□□ 1.71
NECAB3-213ENST00000488489 WDR17Q8IZU2 1322 aa25.74■■□□□ 1.71
NECAB3-213ENST00000488489 COL5A2P05997 1499 aaPredicted RBP25.74■■□□□ 1.71
NECAB3-213ENST00000488489 AHDC1Q5TGY3 1603 aaPredicted RBP25.72■■□□□ 1.71
NECAB3-213ENST00000488489 TEFQ10587 303 aa25.72■■□□□ 1.71
NECAB3-213ENST00000488489 ABCC4O15439 1325 aa25.72■■□□□ 1.71
NECAB3-213ENST00000488489 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.72■■□□□ 1.71
NECAB3-213ENST00000488489 SLC4A2P04920 1241 aa25.71■■□□□ 1.71
NECAB3-213ENST00000488489 OVOS2A0A0G2JMS6 1433 aa25.7■■□□□ 1.7
NECAB3-213ENST00000488489 KCNQ3O43525 872 aa25.7■■□□□ 1.7
NECAB3-213ENST00000488489 ZBTB40Q9NUA8 1239 aa25.7■■□□□ 1.7
NECAB3-213ENST00000488489 TOM1L2Q6ZVM7 507 aa25.69■■□□□ 1.7
NECAB3-213ENST00000488489 API5Q9BZZ5 524 aaKnown RBP25.69■■□□□ 1.7
NECAB3-213ENST00000488489 SPG7Q9UQ90 795 aa25.69■■□□□ 1.7
NECAB3-213ENST00000488489 KDM3BQ7LBC6 1761 aa25.69■■□□□ 1.7
NECAB3-213ENST00000488489 ADAMTS7Q9UKP4 1686 aa25.69■■□□□ 1.7
NECAB3-213ENST00000488489 PHKG2P15735 406 aa25.69■■□□□ 1.7
NECAB3-213ENST00000488489 RGS12O14924 1447 aa25.68■■□□□ 1.7
NECAB3-213ENST00000488489 BTBD11A6QL63 1104 aa25.68■■□□□ 1.7
NECAB3-213ENST00000488489 EIF4A1P60842 406 aaKnown RBP25.67■■□□□ 1.7
NECAB3-213ENST00000488489 G2E3Q7L622 706 aa25.67■■□□□ 1.7
NECAB3-213ENST00000488489 CYP27B1O15528 508 aa25.66■■□□□ 1.7
NECAB3-213ENST00000488489 LARP1Q6PKG0 1096 aaKnown RBP25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms