RNA–Protein interactions for RNA: ENST00000488351.1

VEGFD-202, Transcript of vascular endothelial growth factor D, humanhuman

TSL 2

Gene VEGFD, Length 600 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFD-202ENST00000488351 PAXIP1Q6ZW49 1069 aaPredicted RBP11.04□□□□□ -0.64
VEGFD-202ENST00000488351 RRP7AQ9Y3A4 280 aaKnown RBP11.04□□□□□ -0.64
VEGFD-202ENST00000488351 ALS2Q96Q42 1657 aa11.04□□□□□ -0.64
VEGFD-202ENST00000488351 PITPNM1O00562 1244 aa11.03□□□□□ -0.64
VEGFD-202ENST00000488351 FBLN1P23142 703 aa11.03□□□□□ -0.64
VEGFD-202ENST00000488351 LMOD2Q6P5Q4 547 aa11.03□□□□□ -0.64
VEGFD-202ENST00000488351 ARHGEF25Q86VW2 580 aa11.03□□□□□ -0.64
VEGFD-202ENST00000488351 RTF1Q92541 710 aaKnown RBP11.03□□□□□ -0.64
VEGFD-202ENST00000488351 IFT57Q9NWB7 429 aa11.03□□□□□ -0.64
VEGFD-202ENST00000488351 TRIM35Q9UPQ4 493 aa11.03□□□□□ -0.64
VEGFD-202ENST00000488351 SPATA31A3Q5VYP0 1347 aa11.03□□□□□ -0.64
VEGFD-202ENST00000488351 MED1Q15648 1581 aaPredicted RBP11.03□□□□□ -0.64
VEGFD-202ENST00000488351 XIRP1Q702N8 1843 aaKnown RBP11.02□□□□□ -0.64
VEGFD-202ENST00000488351 BRINP3Q76B58 766 aa11.02□□□□□ -0.65
VEGFD-202ENST00000488351 CHMP4AQ9BY43 222 aa11.02□□□□□ -0.65
VEGFD-202ENST00000488351 LTN1O94822 1766 aa11.02□□□□□ -0.65
VEGFD-202ENST00000488351 PXDNQ92626 1479 aa11.01□□□□□ -0.65
VEGFD-202ENST00000488351 NUTM2GQ5VZR2 741 aa11.01□□□□□ -0.65
VEGFD-202ENST00000488351 CFAP44Q96MT7 982 aa11.01□□□□□ -0.65
VEGFD-202ENST00000488351 BABAM1Q9NWV8 329 aa11.01□□□□□ -0.65
VEGFD-202ENST00000488351 SOS2Q07890 1332 aaPredicted RBP11.01□□□□□ -0.65
VEGFD-202ENST00000488351 CPDO75976 1380 aa11.01□□□□□ -0.65
VEGFD-202ENST00000488351 SENP3-EIF4A1A0A087X0R7 540 aa11□□□□□ -0.65
VEGFD-202ENST00000488351 PDE3AQ14432 1141 aa11□□□□□ -0.65
VEGFD-202ENST00000488351 AMOTQ4VCS5 1084 aa11□□□□□ -0.65
VEGFD-202ENST00000488351 VSIG10Q8N0Z9 540 aa11□□□□□ -0.65
VEGFD-202ENST00000488351 EYA1Q99502 592 aa11□□□□□ -0.65
VEGFD-202ENST00000488351 CANXP27824 592 aaKnown RBP10.99□□□□□ -0.65
VEGFD-202ENST00000488351 ALDH1L2Q3SY69 923 aa10.99□□□□□ -0.65
VEGFD-202ENST00000488351 RNF25Q96BH1 459 aaPredicted RBP10.99□□□□□ -0.65
VEGFD-202ENST00000488351 PHACTR3Q96KR7 559 aa10.99□□□□□ -0.65
VEGFD-202ENST00000488351 SOS1Q07889 1333 aaPredicted RBP10.99□□□□□ -0.65
VEGFD-202ENST00000488351 FANCIQ9NVI1 1328 aa10.99□□□□□ -0.65
VEGFD-202ENST00000488351 IPO8O15397 1037 aaKnown RBP10.98□□□□□ -0.65
VEGFD-202ENST00000488351 XPCQ01831 940 aaPredicted RBP10.98□□□□□ -0.65
VEGFD-202ENST00000488351 SPRYD3Q8NCJ5 442 aa10.98□□□□□ -0.65
VEGFD-202ENST00000488351 FAM212AQ96EL1 285 aa10.98□□□□□ -0.65
VEGFD-202ENST00000488351 CHMP4BQ9H444 224 aaKnown RBP10.98□□□□□ -0.65
VEGFD-202ENST00000488351 KIF16BQ96L93 1317 aa10.98□□□□□ -0.65
VEGFD-202ENST00000488351 FAM208AQ9UK61 1670 aaKnown RBP10.98□□□□□ -0.65
VEGFD-202ENST00000488351 PLEKHO1Q53GL0 409 aaPredicted RBP10.97□□□□□ -0.65
VEGFD-202ENST00000488351 NCAPD2Q15021 1401 aa10.97□□□□□ -0.65
VEGFD-202ENST00000488351 NHSL1Q5SYE7 1610 aa10.96□□□□□ -0.65
VEGFD-202ENST00000488351 GNAT3A8MTJ3 354 aa10.96□□□□□ -0.65
VEGFD-202ENST00000488351 ZNF853P0CG23 659 aa10.96□□□□□ -0.65
VEGFD-202ENST00000488351 RARSP54136 660 aaKnown RBP10.96□□□□□ -0.65
VEGFD-202ENST00000488351 AEBP1Q8IUX7 1158 aa10.96□□□□□ -0.65
VEGFD-202ENST00000488351 RASEFQ8IZ41 740 aa10.96□□□□□ -0.65
VEGFD-202ENST00000488351 ANKRD24Q8TF21 1146 aa10.96□□□□□ -0.65
VEGFD-202ENST00000488351 LRRC59Q96AG4 307 aaKnown RBP10.96□□□□□ -0.65
VEGFD-202ENST00000488351 CCDC136Q96JN2 1154 aa10.96□□□□□ -0.65
VEGFD-202ENST00000488351 OVOS2A0A0G2JMS6 1433 aa10.95□□□□□ -0.66
VEGFD-202ENST00000488351 KIAA0232Q92628 1395 aa10.95□□□□□ -0.66
VEGFD-202ENST00000488351 MAP3K5Q99683 1374 aa10.95□□□□□ -0.66
VEGFD-202ENST00000488351 BRPF1P55201 1214 aaPredicted RBP10.95□□□□□ -0.66
VEGFD-202ENST00000488351 HS6ST3Q8IZP7 471 aa10.95□□□□□ -0.66
VEGFD-202ENST00000488351 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.95□□□□□ -0.66
VEGFD-202ENST00000488351 CAMTA1Q9Y6Y1 1673 aa10.95□□□□□ -0.66
VEGFD-202ENST00000488351 ERBB3P21860 1342 aa10.94□□□□□ -0.66
VEGFD-202ENST00000488351 ZBTB7CA1YPR0 619 aa10.94□□□□□ -0.66
VEGFD-202ENST00000488351 TOM1O60784 492 aa10.94□□□□□ -0.66
VEGFD-202ENST00000488351 IRX6P78412 446 aaPredicted RBP10.94□□□□□ -0.66
VEGFD-202ENST00000488351 EXOSC9Q06265 439 aaKnown RBP10.94□□□□□ -0.66
VEGFD-202ENST00000488351 MTHFSDQ2M296 383 aaKnown RBP10.94□□□□□ -0.66
VEGFD-202ENST00000488351 C1orf141Q5JVX7 400 aa10.94□□□□□ -0.66
VEGFD-202ENST00000488351 ZKSCAN2Q63HK3 967 aa10.94□□□□□ -0.66
VEGFD-202ENST00000488351 RAPGEF4Q8WZA2 1011 aa10.94□□□□□ -0.66
VEGFD-202ENST00000488351 LTV1Q96GA3 475 aaPredicted RBP10.94□□□□□ -0.66
VEGFD-202ENST00000488351 RIOK3O14730 519 aaKnown RBP10.93□□□□□ -0.66
VEGFD-202ENST00000488351 CHRM1P11229 460 aaPredicted RBP10.93□□□□□ -0.66
VEGFD-202ENST00000488351 AKAP4Q5JQC9 854 aa10.93□□□□□ -0.66
VEGFD-202ENST00000488351 SMC4Q9NTJ3 1288 aa10.93□□□□□ -0.66
VEGFD-202ENST00000488351 LAS1LQ9Y4W2 734 aaKnown RBP10.93□□□□□ -0.66
VEGFD-202ENST00000488351 AHDC1Q5TGY3 1603 aaPredicted RBP10.93□□□□□ -0.66
VEGFD-202ENST00000488351 LTBP4Q8N2S1 1624 aa10.93□□□□□ -0.66
VEGFD-202ENST00000488351 DLG5Q8TDM6 1919 aa10.93□□□□□ -0.66
VEGFD-202ENST00000488351 CHL1O00533 1208 aa10.92□□□□□ -0.66
VEGFD-202ENST00000488351 ZC3H6P61129 1189 aaKnown RBP10.92□□□□□ -0.66
VEGFD-202ENST00000488351 NBPF6Q5VWK0 638 aa10.92□□□□□ -0.66
VEGFD-202ENST00000488351 ARHGAP45Q92619 1136 aa10.92□□□□□ -0.66
VEGFD-202ENST00000488351 TSR2Q969E8 191 aaKnown RBP10.92□□□□□ -0.66
VEGFD-202ENST00000488351 NBPF4Q96M43 638 aa10.92□□□□□ -0.66
VEGFD-202ENST00000488351 PRDM11Q9NQV5 511 aa10.92□□□□□ -0.66
VEGFD-202ENST00000488351 SPG7Q9UQ90 795 aa10.92□□□□□ -0.66
VEGFD-202ENST00000488351 CRYBG1Q9Y4K1 1723 aa10.92□□□□□ -0.66
VEGFD-202ENST00000488351 HSP90AB1P08238 724 aaKnown RBP10.91□□□□□ -0.66
VEGFD-202ENST00000488351 CSB-PGBD3P0DP91 1061 aa10.91□□□□□ -0.66
VEGFD-202ENST00000488351 TATP17735 454 aaPredicted RBP10.91□□□□□ -0.66
VEGFD-202ENST00000488351 TWISTNBQ3B726 338 aaPredicted RBP10.91□□□□□ -0.66
VEGFD-202ENST00000488351 FTSJ3Q8IY81 847 aaKnown RBP10.91□□□□□ -0.66
VEGFD-202ENST00000488351 MBIPQ9NS73 344 aa10.91□□□□□ -0.66
VEGFD-202ENST00000488351 TAOK2Q9UL54 1235 aa10.91□□□□□ -0.66
VEGFD-202ENST00000488351 BCAR3O75815 825 aa10.9□□□□□ -0.66
VEGFD-202ENST00000488351 TAF7Q15545 349 aaPredicted RBP10.9□□□□□ -0.66
VEGFD-202ENST00000488351 TSPYL4Q9UJ04 414 aa10.9□□□□□ -0.66
VEGFD-202ENST00000488351 CRB1P82279 1406 aa10.9□□□□□ -0.66
VEGFD-202ENST00000488351 LMO7Q8WWI1 1683 aa10.89□□□□□ -0.67
VEGFD-202ENST00000488351 LRRC37A3O60309 1634 aa10.89□□□□□ -0.67
VEGFD-202ENST00000488351 ZNF530Q6P9A1 599 aaPredicted RBP10.89□□□□□ -0.67
VEGFD-202ENST00000488351 FRAT1Q92837 279 aaPredicted RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms