RNA–Protein interactions for RNA: ENST00000488217.1

TRIM50-203, Transcript of tripartite motif containing 50, humanhuman

TSL 2

Gene TRIM50, Length 548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-203ENST00000488217 RTL1A6NKG5 1358 aa21.28■■□□□ 1
TRIM50-203ENST00000488217 TATP17735 454 aaPredicted RBP21.27■■□□□ 1
TRIM50-203ENST00000488217 KCNQ4P56696 695 aa21.27■■□□□ 1
TRIM50-203ENST00000488217 ARXQ96QS3 562 aa21.27■■□□□ 1
TRIM50-203ENST00000488217 LTN1O94822 1766 aa21.27■■□□□ 1
TRIM50-203ENST00000488217 SLC16A10Q8TF71 515 aa21.26■□□□□ 0.99
TRIM50-203ENST00000488217 TFCP2L1Q9NZI6 479 aa21.26■□□□□ 0.99
TRIM50-203ENST00000488217 CLSPNQ9HAW4 1339 aa21.26■□□□□ 0.99
TRIM50-203ENST00000488217 INSRP06213 1382 aa21.25■□□□□ 0.99
TRIM50-203ENST00000488217 KIF24Q5T7B8 1368 aa21.23■□□□□ 0.99
TRIM50-203ENST00000488217 PPM1GO15355 546 aaPredicted RBP21.23■□□□□ 0.99
TRIM50-203ENST00000488217 NHSQ6T4R5 1651 aa21.23■□□□□ 0.99
TRIM50-203ENST00000488217 SMG6Q86US8 1419 aaKnown RBP21.22■□□□□ 0.99
TRIM50-203ENST00000488217 CCNL1Q9UK58 526 aaPredicted RBP21.22■□□□□ 0.99
TRIM50-203ENST00000488217 EMILIN1Q9Y6C2 1016 aa21.22■□□□□ 0.99
TRIM50-203ENST00000488217 FLT4P35916 1363 aa21.22■□□□□ 0.99
TRIM50-203ENST00000488217 CASZ1Q86V15 1759 aa21.21■□□□□ 0.99
TRIM50-203ENST00000488217 MEGF6O75095 1541 aa21.21■□□□□ 0.99
TRIM50-203ENST00000488217 PNPLA7Q6ZV29 1317 aa21.2■□□□□ 0.98
TRIM50-203ENST00000488217 POLR3GLQ9BT43 218 aa21.19■□□□□ 0.98
TRIM50-203ENST00000488217 NSD2O96028 1365 aa21.19■□□□□ 0.98
TRIM50-203ENST00000488217 CYP27B1O15528 508 aa21.18■□□□□ 0.98
TRIM50-203ENST00000488217 HMGB2P26583 209 aaKnown RBP21.18■□□□□ 0.98
TRIM50-203ENST00000488217 POLD1P28340 1107 aa21.18■□□□□ 0.98
TRIM50-203ENST00000488217 MPRIPQ6WCQ1 1025 aa21.18■□□□□ 0.98
TRIM50-203ENST00000488217 WASHC2AQ641Q2 1341 aa21.18■□□□□ 0.98
TRIM50-203ENST00000488217 PCDH11XQ9BZA7 1347 aa21.18■□□□□ 0.98
TRIM50-203ENST00000488217 PCDH11YQ9BZA8 1340 aa21.18■□□□□ 0.98
TRIM50-203ENST00000488217 NSD3Q9BZ95 1437 aa21.17■□□□□ 0.98
TRIM50-203ENST00000488217 POLKQ9UBT6 870 aa21.16■□□□□ 0.98
TRIM50-203ENST00000488217 UTRNP46939 3433 aa21.16■□□□□ 0.98
TRIM50-203ENST00000488217 SPG7Q9UQ90 795 aa21.15■□□□□ 0.98
TRIM50-203ENST00000488217 BTAF1O14981 1849 aa21.14■□□□□ 0.97
TRIM50-203ENST00000488217 MSH5O43196 834 aa21.14■□□□□ 0.97
TRIM50-203ENST00000488217 EIF4G2P78344 907 aaKnown RBP eCLIP21.14■□□□□ 0.97
TRIM50-203ENST00000488217 COL23A1Q86Y22 540 aaPredicted RBP21.14■□□□□ 0.97
TRIM50-203ENST00000488217 EYA1Q99502 592 aa21.14■□□□□ 0.97
TRIM50-203ENST00000488217 KAT6BQ8WYB5 2073 aa21.14■□□□□ 0.97
TRIM50-203ENST00000488217 NKX1-1Q15270 411 aaPredicted RBP21.13■□□□□ 0.97
TRIM50-203ENST00000488217 MAP3K5Q99683 1374 aa21.12■□□□□ 0.97
TRIM50-203ENST00000488217 FAM208AQ9UK61 1670 aaKnown RBP21.12■□□□□ 0.97
TRIM50-203ENST00000488217 SMARCC1Q92922 1105 aaPredicted RBP21.12■□□□□ 0.97
TRIM50-203ENST00000488217 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.12■□□□□ 0.97
TRIM50-203ENST00000488217 PAPPAQ13219 1627 aa21.11■□□□□ 0.97
TRIM50-203ENST00000488217 TNNT2P45379 298 aaPredicted RBP21.11■□□□□ 0.97
TRIM50-203ENST00000488217 GPR162Q16538 588 aa21.11■□□□□ 0.97
TRIM50-203ENST00000488217 KLHL34Q8N239 644 aa21.11■□□□□ 0.97
TRIM50-203ENST00000488217 PANK3Q9H999 370 aa21.11■□□□□ 0.97
TRIM50-203ENST00000488217 HSPA5P11021 654 aaKnown RBP21.1■□□□□ 0.97
TRIM50-203ENST00000488217 PIGBQ92521 554 aa21.1■□□□□ 0.97
TRIM50-203ENST00000488217 FLAD1Q8NFF5 587 aa21.09■□□□□ 0.97
TRIM50-203ENST00000488217 CCER1Q8TC90 406 aaPredicted RBP21.09■□□□□ 0.97
TRIM50-203ENST00000488217 MYOM1P52179 1685 aa21.09■□□□□ 0.97
TRIM50-203ENST00000488217 EIF4A2Q14240 407 aaKnown RBP21.07■□□□□ 0.96
TRIM50-203ENST00000488217 IFNL2Q8IZJ0 200 aa21.07■□□□□ 0.96
TRIM50-203ENST00000488217 PALLDQ8WX93 1383 aa21.07■□□□□ 0.96
TRIM50-203ENST00000488217 ZNF784Q8NCA9 323 aaPredicted RBP21.06■□□□□ 0.96
TRIM50-203ENST00000488217 RGPD2P0DJD1 1756 aa21.05■□□□□ 0.96
TRIM50-203ENST00000488217 PHKG2P15735 406 aa21.04■□□□□ 0.96
TRIM50-203ENST00000488217 TMOD3Q9NYL9 352 aa21.04■□□□□ 0.96
TRIM50-203ENST00000488217 MSL1Q68DK7 614 aa21.03■□□□□ 0.96
TRIM50-203ENST00000488217 PELP1Q8IZL8 1130 aaKnown RBP21.03■□□□□ 0.96
TRIM50-203ENST00000488217 NLGN2Q8NFZ4 835 aa21.03■□□□□ 0.96
TRIM50-203ENST00000488217 AK7Q96M32 723 aa21.02■□□□□ 0.96
TRIM50-203ENST00000488217 NCAPD2Q15021 1401 aa21.02■□□□□ 0.96
TRIM50-203ENST00000488217 LOC102724428A0A0B4J2F2 783 aa21.01■□□□□ 0.95
TRIM50-203ENST00000488217 SIK1P57059 783 aa21.01■□□□□ 0.95
TRIM50-203ENST00000488217 ASAP1Q9ULH1 1129 aa21.01■□□□□ 0.95
TRIM50-203ENST00000488217 MORC1Q86VD1 984 aa21■□□□□ 0.95
TRIM50-203ENST00000488217 PLEKHO1Q53GL0 409 aaPredicted RBP20.99■□□□□ 0.95
TRIM50-203ENST00000488217 ATG3Q9NT62 314 aa20.99■□□□□ 0.95
TRIM50-203ENST00000488217 CD2APQ9Y5K6 639 aa20.99■□□□□ 0.95
TRIM50-203ENST00000488217 DOT1LQ8TEK3 1739 aa20.98■□□□□ 0.95
TRIM50-203ENST00000488217 SHANK3Q9BYB0 1731 aa20.98■□□□□ 0.95
TRIM50-203ENST00000488217 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.98■□□□□ 0.95
TRIM50-203ENST00000488217 ERVV-2B6SEH9 535 aa20.98■□□□□ 0.95
TRIM50-203ENST00000488217 GRIN3BO60391 1043 aa20.98■□□□□ 0.95
TRIM50-203ENST00000488217 ATP6V1AP38606 617 aa20.98■□□□□ 0.95
TRIM50-203ENST00000488217 AMIGO3Q86WK7 504 aa20.98■□□□□ 0.95
TRIM50-203ENST00000488217 SMIM5Q71RC9 77 aa20.97■□□□□ 0.95
TRIM50-203ENST00000488217 LINC00116Q8NCU8 138 aa20.97■□□□□ 0.95
TRIM50-203ENST00000488217 KNSTRNQ9Y448 316 aa20.97■□□□□ 0.95
TRIM50-203ENST00000488217 GOLGB1Q14789 3259 aaKnown RBP20.97■□□□□ 0.95
TRIM50-203ENST00000488217 KIF20BQ96Q89 1820 aa20.97■□□□□ 0.95
TRIM50-203ENST00000488217 LY75O60449 1722 aa20.96■□□□□ 0.95
TRIM50-203ENST00000488217 PHF14O94880 888 aa20.96■□□□□ 0.95
TRIM50-203ENST00000488217 HSP90AB1P08238 724 aaKnown RBP20.96■□□□□ 0.95
TRIM50-203ENST00000488217 IGSF1Q8N6C5 1336 aa20.96■□□□□ 0.95
TRIM50-203ENST00000488217 SSFA2P28290 1259 aa20.95■□□□□ 0.94
TRIM50-203ENST00000488217 ITPK1Q13572 414 aa20.95■□□□□ 0.94
TRIM50-203ENST00000488217 AMOTQ4VCS5 1084 aa20.95■□□□□ 0.94
TRIM50-203ENST00000488217 DCAF5Q96JK2 942 aa20.95■□□□□ 0.94
TRIM50-203ENST00000488217 YBX3P16989 372 aaKnown RBP eCLIP20.94■□□□□ 0.94
TRIM50-203ENST00000488217 PLEKHG2Q9H7P9 1386 aa20.92■□□□□ 0.94
TRIM50-203ENST00000488217 GNPATO15228 680 aa20.91■□□□□ 0.94
TRIM50-203ENST00000488217 MTHFSP49914 203 aa20.91■□□□□ 0.94
TRIM50-203ENST00000488217 CABP4P57796 275 aa20.91■□□□□ 0.94
TRIM50-203ENST00000488217 QSER1Q2KHR3 1735 aa20.91■□□□□ 0.94
TRIM50-203ENST00000488217 TRAPPC3LQ5T215 181 aa20.9■□□□□ 0.94
TRIM50-203ENST00000488217 SULT6B1Q6IMI4 303 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms