RNA–Protein interactions for RNA: ENST00000488128.6

COL16A1-214, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 2,854 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-214ENST00000488128 ZNF500O60304 480 aaPredicted RBP17.4■□□□□ 0.38
COL16A1-214ENST00000488128 SDSP20132 328 aa17.4■□□□□ 0.38
COL16A1-214ENST00000488128 C17orf53Q8N3J3 647 aaPredicted RBP17.4■□□□□ 0.38
COL16A1-214ENST00000488128 IBTKQ9P2D0 1353 aaPredicted RBP17.39■□□□□ 0.37
COL16A1-214ENST00000488128 KRT24Q2M2I5 525 aa17.39■□□□□ 0.37
COL16A1-214ENST00000488128 TTC22Q5TAA0 569 aa17.39■□□□□ 0.37
COL16A1-214ENST00000488128 MBIPQ9NS73 344 aa17.39■□□□□ 0.37
COL16A1-214ENST00000488128 IL16Q14005 1332 aa17.39■□□□□ 0.37
COL16A1-214ENST00000488128 TWISTNBQ3B726 338 aaPredicted RBP17.38■□□□□ 0.37
COL16A1-214ENST00000488128 ADGRB2O60241 1585 aa17.38■□□□□ 0.37
COL16A1-214ENST00000488128 ST18O60284 1047 aa17.38■□□□□ 0.37
COL16A1-214ENST00000488128 LRSAM1Q6UWE0 723 aa17.38■□□□□ 0.37
COL16A1-214ENST00000488128 ALKQ9UM73 1620 aa17.37■□□□□ 0.37
COL16A1-214ENST00000488128 NCKAP5LQ9HCH0 1330 aa17.37■□□□□ 0.37
COL16A1-214ENST00000488128 DTNBO60941 627 aa17.37■□□□□ 0.37
COL16A1-214ENST00000488128 NEK4P51957 841 aa17.37■□□□□ 0.37
COL16A1-214ENST00000488128 INTS3Q68E01 1043 aaKnown RBP17.36■□□□□ 0.37
COL16A1-214ENST00000488128 ZRANB1Q9UGI0 708 aa17.36■□□□□ 0.37
COL16A1-214ENST00000488128 TXNDC2Q86VQ3 553 aa17.36■□□□□ 0.37
COL16A1-214ENST00000488128 PLCB2Q00722 1185 aa17.35■□□□□ 0.37
COL16A1-214ENST00000488128 TSPOAP1O95153 1857 aa17.35■□□□□ 0.37
COL16A1-214ENST00000488128 A0A0U1RQG5 324 aaPredicted RBP17.34■□□□□ 0.37
COL16A1-214ENST00000488128 HS1BP3Q53T59 392 aa17.34■□□□□ 0.37
COL16A1-214ENST00000488128 POLKQ9UBT6 870 aa17.34■□□□□ 0.37
COL16A1-214ENST00000488128 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.34■□□□□ 0.37
COL16A1-214ENST00000488128 COL3A1P02461 1466 aaPredicted RBP17.34■□□□□ 0.37
COL16A1-214ENST00000488128 ARHGEF40Q8TER5 1519 aa17.34■□□□□ 0.37
COL16A1-214ENST00000488128 CCDC39Q9UFE4 941 aa17.34■□□□□ 0.37
COL16A1-214ENST00000488128 NCBP3Q53F19 620 aaKnown RBP17.33■□□□□ 0.36
COL16A1-214ENST00000488128 EMILIN1Q9Y6C2 1016 aa17.33■□□□□ 0.36
COL16A1-214ENST00000488128 RIMS2Q9UQ26 1411 aa17.33■□□□□ 0.36
COL16A1-214ENST00000488128 GADD45BO75293 160 aaPredicted RBP17.33■□□□□ 0.36
COL16A1-214ENST00000488128 FCHSD2O94868 740 aa17.33■□□□□ 0.36
COL16A1-214ENST00000488128 NME9Q86XW9 330 aa17.33■□□□□ 0.36
COL16A1-214ENST00000488128 DCTPP1Q9H773 170 aa17.33■□□□□ 0.36
COL16A1-214ENST00000488128 SASS6Q6UVJ0 657 aa17.32■□□□□ 0.36
COL16A1-214ENST00000488128 TTC12Q9H892 705 aaPredicted RBP17.32■□□□□ 0.36
COL16A1-214ENST00000488128 TERF1P54274 439 aa17.32■□□□□ 0.36
COL16A1-214ENST00000488128 TMX3Q96JJ7 454 aa17.32■□□□□ 0.36
COL16A1-214ENST00000488128 A2ML1A8K2U0 1454 aa17.32■□□□□ 0.36
COL16A1-214ENST00000488128 DYNC1I1O14576 645 aa17.31■□□□□ 0.36
COL16A1-214ENST00000488128 CWC22Q9HCG8 908 aaKnown RBP17.31■□□□□ 0.36
COL16A1-214ENST00000488128 ABCC4O15439 1325 aa17.31■□□□□ 0.36
COL16A1-214ENST00000488128 NFE2L2Q16236 605 aa17.31■□□□□ 0.36
COL16A1-214ENST00000488128 CSPP1Q1MSJ5 1256 aa17.31■□□□□ 0.36
COL16A1-214ENST00000488128 UPF3BQ9BZI7 483 aaKnown RBP17.31■□□□□ 0.36
COL16A1-214ENST00000488128 ESF1Q9H501 851 aaKnown RBP17.31■□□□□ 0.36
COL16A1-214ENST00000488128 CBX1P83916 185 aa17.3■□□□□ 0.36
COL16A1-214ENST00000488128 MAP7D2Q96T17 732 aa17.3■□□□□ 0.36
COL16A1-214ENST00000488128 USP25Q9UHP3 1055 aa17.3■□□□□ 0.36
COL16A1-214ENST00000488128 MED14O60244 1454 aa17.3■□□□□ 0.36
COL16A1-214ENST00000488128 METP08581 1390 aa17.3■□□□□ 0.36
COL16A1-214ENST00000488128 CASC1Q6TDU7 716 aa17.3■□□□□ 0.36
COL16A1-214ENST00000488128 CHMP4BQ9H444 224 aaKnown RBP17.3■□□□□ 0.36
COL16A1-214ENST00000488128 GNAI1P63096 354 aa17.3■□□□□ 0.36
COL16A1-214ENST00000488128 MEIS3Q99687 375 aa17.3■□□□□ 0.36
COL16A1-214ENST00000488128 LARP6Q9BRS8 491 aaKnown RBP17.3■□□□□ 0.36
COL16A1-214ENST00000488128 KIAA2012Q0VF49 1180 aa17.29■□□□□ 0.36
COL16A1-214ENST00000488128 PALD1Q9ULE6 856 aa17.29■□□□□ 0.36
COL16A1-214ENST00000488128 ARHGAP45Q92619 1136 aa17.29■□□□□ 0.36
COL16A1-214ENST00000488128 TSPY26PQ9H489 355 aa17.29■□□□□ 0.36
COL16A1-214ENST00000488128 PODXL2Q9NZ53 605 aa17.29■□□□□ 0.36
COL16A1-214ENST00000488128 PNPLA6Q8IY17 1366 aa17.28■□□□□ 0.36
COL16A1-214ENST00000488128 NUTM2FA1L443 756 aa17.28■□□□□ 0.36
COL16A1-214ENST00000488128 WASLO00401 505 aaPredicted RBP17.28■□□□□ 0.36
COL16A1-214ENST00000488128 RRS1Q15050 365 aaKnown RBP17.28■□□□□ 0.36
COL16A1-214ENST00000488128 SLC4A10Q6U841 1118 aa17.28■□□□□ 0.36
COL16A1-214ENST00000488128 CLTCQ00610 1675 aaKnown RBP17.27■□□□□ 0.36
COL16A1-214ENST00000488128 API5Q9BZZ5 524 aaKnown RBP17.27■□□□□ 0.36
COL16A1-214ENST00000488128 DIP2BQ9P265 1576 aa17.27■□□□□ 0.35
COL16A1-214ENST00000488128 ERC2O15083 957 aa17.26■□□□□ 0.35
COL16A1-214ENST00000488128 REC8O95072 547 aa17.26■□□□□ 0.35
COL16A1-214ENST00000488128 CEP85Q6P2H3 762 aa17.26■□□□□ 0.35
COL16A1-214ENST00000488128 IGSF3O75054 1194 aa17.26■□□□□ 0.35
COL16A1-214ENST00000488128 NUDT16Q96DE0 195 aaKnown RBP17.26■□□□□ 0.35
COL16A1-214ENST00000488128 EXOC6BQ9Y2D4 811 aa17.26■□□□□ 0.35
COL16A1-214ENST00000488128 LRRC7Q96NW7 1537 aa17.26■□□□□ 0.35
COL16A1-214ENST00000488128 BCL11BQ9C0K0 894 aaPredicted RBP17.26■□□□□ 0.35
COL16A1-214ENST00000488128 RIMBP3CA6NJZ7 1639 aa17.26■□□□□ 0.35
COL16A1-214ENST00000488128 RIMBP3BA6NNM3 1639 aa17.26■□□□□ 0.35
COL16A1-214ENST00000488128 RIMBP3Q9UFD9 1639 aa17.26■□□□□ 0.35
COL16A1-214ENST00000488128 PLEKHG5O94827 1062 aa17.25■□□□□ 0.35
COL16A1-214ENST00000488128 BRPF1P55201 1214 aaPredicted RBP17.25■□□□□ 0.35
COL16A1-214ENST00000488128 PLPPR3Q6T4P5 718 aa17.25■□□□□ 0.35
COL16A1-214ENST00000488128 RILPL2Q969X0 211 aa17.25■□□□□ 0.35
COL16A1-214ENST00000488128 ANO2Q9NQ90 1003 aa17.25■□□□□ 0.35
COL16A1-214ENST00000488128 MIS18AQ9NYP9 233 aa17.25■□□□□ 0.35
COL16A1-214ENST00000488128 PTCH1Q13635 1447 aa17.25■□□□□ 0.35
COL16A1-214ENST00000488128 SPDYE4A6NLX3 237 aa17.25■□□□□ 0.35
COL16A1-214ENST00000488128 ANKRD44Q8N8A2 993 aa17.25■□□□□ 0.35
COL16A1-214ENST00000488128 IFT57Q9NWB7 429 aa17.25■□□□□ 0.35
COL16A1-214ENST00000488128 PPP6R1Q9UPN7 881 aa17.25■□□□□ 0.35
COL16A1-214ENST00000488128 F6X3S4 739 aa17.24■□□□□ 0.35
COL16A1-214ENST00000488128 ZNF428Q96B54 188 aa17.24■□□□□ 0.35
COL16A1-214ENST00000488128 HCLS1P14317 486 aaPredicted RBP17.24■□□□□ 0.35
COL16A1-214ENST00000488128 ZNF710Q8N1W2 664 aa17.24■□□□□ 0.35
COL16A1-214ENST00000488128 MBD3O95983 291 aa17.23■□□□□ 0.35
COL16A1-214ENST00000488128 USP48Q86UV5 1035 aa17.23■□□□□ 0.35
COL16A1-214ENST00000488128 TRIM6-TRIM34B2RNG4 842 aa17.23■□□□□ 0.35
COL16A1-214ENST00000488128 MCM5P33992 734 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms