RNA–Protein interactions for RNA: ENST00000488127.1

LDLRAP1-207, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

TSL 2

Gene LDLRAP1, Length 4,670 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-207ENST00000488127 TMEM2Q9UHN6 1383 aa14.08□□□□□ -0.16
LDLRAP1-207ENST00000488127 SAMD1Q6SPF0 538 aaPredicted RBP14.08□□□□□ -0.16
LDLRAP1-207ENST00000488127 ZNF592Q92610 1267 aa14.08□□□□□ -0.16
LDLRAP1-207ENST00000488127 PODXL2Q9NZ53 605 aa14.08□□□□□ -0.16
LDLRAP1-207ENST00000488127 TRIM34Q9BYJ4 488 aa14.08□□□□□ -0.16
LDLRAP1-207ENST00000488127 ZBTB3Q9H5J0 574 aa14.08□□□□□ -0.16
LDLRAP1-207ENST00000488127 C22orf23Q9BZE7 217 aa14.08□□□□□ -0.16
LDLRAP1-207ENST00000488127 EXOC6BQ9Y2D4 811 aa14.08□□□□□ -0.16
LDLRAP1-207ENST00000488127 INTS3Q68E01 1043 aaKnown RBP14.07□□□□□ -0.16
LDLRAP1-207ENST00000488127 CLSTN1O94985 981 aa14.07□□□□□ -0.16
LDLRAP1-207ENST00000488127 TPM4P67936 248 aa14.07□□□□□ -0.16
LDLRAP1-207ENST00000488127 AAMPQ13685 434 aa14.07□□□□□ -0.16
LDLRAP1-207ENST00000488127 MTERF4Q7Z6M4 381 aaKnown RBP14.07□□□□□ -0.16
LDLRAP1-207ENST00000488127 MAP4K4O95819 1239 aaPredicted RBP14.07□□□□□ -0.16
LDLRAP1-207ENST00000488127 AMOTL1Q8IY63 956 aa14.07□□□□□ -0.16
LDLRAP1-207ENST00000488127 MYD88Q99836 296 aa14.07□□□□□ -0.16
LDLRAP1-207ENST00000488127 TTC37Q6PGP7 1564 aa14.07□□□□□ -0.16
LDLRAP1-207ENST00000488127 GPTP24298 496 aa14.06□□□□□ -0.16
LDLRAP1-207ENST00000488127 TRDNQ13061 729 aa14.06□□□□□ -0.16
LDLRAP1-207ENST00000488127 FAM184AQ8NB25 1140 aa14.06□□□□□ -0.16
LDLRAP1-207ENST00000488127 MBIPQ9NS73 344 aa14.06□□□□□ -0.16
LDLRAP1-207ENST00000488127 MAST1Q9Y2H9 1570 aa14.06□□□□□ -0.16
LDLRAP1-207ENST00000488127 MAP3K19Q56UN5 1328 aa14.06□□□□□ -0.16
LDLRAP1-207ENST00000488127 VPS53Q5VIR6 699 aa14.06□□□□□ -0.16
LDLRAP1-207ENST00000488127 FMNL2Q96PY5 1086 aa14.06□□□□□ -0.16
LDLRAP1-207ENST00000488127 SPINK5Q9NQ38 1064 aaPredicted RBP14.06□□□□□ -0.16
LDLRAP1-207ENST00000488127 MTMR7Q9Y216 660 aa14.06□□□□□ -0.16
LDLRAP1-207ENST00000488127 RASSF8Q8NHQ8 419 aa14.05□□□□□ -0.16
LDLRAP1-207ENST00000488127 ZCRB1Q8TBF4 217 aaKnown RBP14.05□□□□□ -0.16
LDLRAP1-207ENST00000488127 DHX16O60231 1041 aaKnown RBP14.05□□□□□ -0.16
LDLRAP1-207ENST00000488127 SYNE3Q6ZMZ3 975 aa14.05□□□□□ -0.16
LDLRAP1-207ENST00000488127 RRP9O43818 475 aaKnown RBP14.05□□□□□ -0.16
LDLRAP1-207ENST00000488127 H3BQV1 296 aa14.04□□□□□ -0.16
LDLRAP1-207ENST00000488127 PIP4K2AP48426 406 aaPredicted RBP14.04□□□□□ -0.16
LDLRAP1-207ENST00000488127 IFFO2Q5TF58 517 aa14.04□□□□□ -0.16
LDLRAP1-207ENST00000488127 MCTP1Q6DN14 999 aa14.04□□□□□ -0.16
LDLRAP1-207ENST00000488127 EYA1Q99502 592 aa14.04□□□□□ -0.16
LDLRAP1-207ENST00000488127 AKAP17AQ02040 695 aaKnown RBP14.04□□□□□ -0.16
LDLRAP1-207ENST00000488127 LRRCC1Q9C099 1032 aa14.04□□□□□ -0.16
LDLRAP1-207ENST00000488127 DNAJC5Q9H3Z4 198 aa14.04□□□□□ -0.16
LDLRAP1-207ENST00000488127 ABCC1P33527 1531 aa14.04□□□□□ -0.16
LDLRAP1-207ENST00000488127 RNF20Q5VTR2 975 aa14.04□□□□□ -0.16
LDLRAP1-207ENST00000488127 ABCC11Q96J66 1382 aa14.04□□□□□ -0.16
LDLRAP1-207ENST00000488127 ATP5J2-PTCD1G3V325 749 aa14.03□□□□□ -0.16
LDLRAP1-207ENST00000488127 CNTROBQ8N137 903 aa14.03□□□□□ -0.16
LDLRAP1-207ENST00000488127 JARID2Q92833 1246 aaPredicted RBP14.03□□□□□ -0.16
LDLRAP1-207ENST00000488127 PHACTR3Q96KR7 559 aa14.03□□□□□ -0.16
LDLRAP1-207ENST00000488127 MYO5CQ9NQX4 1742 aa14.03□□□□□ -0.16
LDLRAP1-207ENST00000488127 ZPR1O75312 459 aa14.03□□□□□ -0.16
LDLRAP1-207ENST00000488127 CDC45O75419 566 aa14.03□□□□□ -0.16
LDLRAP1-207ENST00000488127 GCC1Q96CN9 775 aa14.03□□□□□ -0.16
LDLRAP1-207ENST00000488127 DBF4Q9UBU7 674 aaPredicted RBP14.03□□□□□ -0.16
LDLRAP1-207ENST00000488127 LARP1Q6PKG0 1096 aaKnown RBP14.03□□□□□ -0.16
LDLRAP1-207ENST00000488127 CEP126Q9P2H0 1117 aa14.03□□□□□ -0.16
LDLRAP1-207ENST00000488127 SAMD9LQ8IVG5 1584 aa14.03□□□□□ -0.16
LDLRAP1-207ENST00000488127 CPLX1O14810 134 aa14.03□□□□□ -0.16
LDLRAP1-207ENST00000488127 MTHFSDQ2M296 383 aaKnown RBP14.03□□□□□ -0.16
LDLRAP1-207ENST00000488127 SKAP1Q86WV1 359 aa14.03□□□□□ -0.16
LDLRAP1-207ENST00000488127 TBC1D2BQ9UPU7 963 aa14.03□□□□□ -0.16
LDLRAP1-207ENST00000488127 GOLGA6L19H0YKK7 550 aa14.02□□□□□ -0.16
LDLRAP1-207ENST00000488127 PER1O15534 1290 aaPredicted RBP14.02□□□□□ -0.16
LDLRAP1-207ENST00000488127 FLIIQ13045 1269 aa14.02□□□□□ -0.16
LDLRAP1-207ENST00000488127 SF3A1Q15459 793 aaKnown RBP14.02□□□□□ -0.16
LDLRAP1-207ENST00000488127 NFXL1Q6ZNB6 911 aa14.02□□□□□ -0.16
LDLRAP1-207ENST00000488127 AACSQ86V21 672 aa14.02□□□□□ -0.16
LDLRAP1-207ENST00000488127 RNF214Q8ND24 703 aa14.02□□□□□ -0.16
LDLRAP1-207ENST00000488127 BTG4Q9NY30 223 aa14.02□□□□□ -0.16
LDLRAP1-207ENST00000488127 SLAIN2Q9P270 581 aa14.02□□□□□ -0.16
LDLRAP1-207ENST00000488127 PLEKHH1Q9ULM0 1364 aa14.02□□□□□ -0.16
LDLRAP1-207ENST00000488127 ZCCHC11Q5TAX3 1644 aaKnown RBP14.02□□□□□ -0.16
LDLRAP1-207ENST00000488127 MARCH6O60337 910 aa14.02□□□□□ -0.16
LDLRAP1-207ENST00000488127 FOSBP53539 338 aa14.02□□□□□ -0.16
LDLRAP1-207ENST00000488127 FKBP4Q02790 459 aaKnown RBP eCLIP14.02□□□□□ -0.16
LDLRAP1-207ENST00000488127 NUCB2P80303 420 aa14.02□□□□□ -0.17
LDLRAP1-207ENST00000488127 CCDC158Q5M9N0 1113 aa14.02□□□□□ -0.17
LDLRAP1-207ENST00000488127 TTC39AQ5SRH9 613 aa14.02□□□□□ -0.17
LDLRAP1-207ENST00000488127 CCAR2Q8N163 923 aaKnown RBP14.02□□□□□ -0.17
LDLRAP1-207ENST00000488127 STK11IPQ8N1F8 1099 aa14.02□□□□□ -0.17
LDLRAP1-207ENST00000488127 KIF3AQ9Y496 699 aa14.02□□□□□ -0.17
LDLRAP1-207ENST00000488127 ATP6V1DQ9Y5K8 247 aa14.02□□□□□ -0.17
LDLRAP1-207ENST00000488127 BECN2A8MW95 431 aa14.02□□□□□ -0.17
LDLRAP1-207ENST00000488127 DDB1Q16531 1140 aa14.02□□□□□ -0.17
LDLRAP1-207ENST00000488127 ERC1Q8IUD2 1116 aa14.02□□□□□ -0.17
LDLRAP1-207ENST00000488127 ASXL1Q8IXJ9 1541 aa14.01□□□□□ -0.17
LDLRAP1-207ENST00000488127 RALYLQ86SE5 291 aaKnown RBP14.01□□□□□ -0.17
LDLRAP1-207ENST00000488127 DNAAF4Q8WXU2 420 aa14.01□□□□□ -0.17
LDLRAP1-207ENST00000488127 CPLX2Q6PUV4 134 aaKnown RBP14.01□□□□□ -0.17
LDLRAP1-207ENST00000488127 PI4KAP2A4QPH2 592 aa14.01□□□□□ -0.17
LDLRAP1-207ENST00000488127 PI4KAP1Q8N8J0 262 aa14.01□□□□□ -0.17
LDLRAP1-207ENST00000488127 ESPNB1AK53 854 aa14□□□□□ -0.17
LDLRAP1-207ENST00000488127 TRIM27P14373 513 aa14□□□□□ -0.17
LDLRAP1-207ENST00000488127 TRMT112Q9UI30 125 aaKnown RBP14□□□□□ -0.17
LDLRAP1-207ENST00000488127 FLT4P35916 1363 aa14□□□□□ -0.17
LDLRAP1-207ENST00000488127 A0A087WZG4 1122 aa14□□□□□ -0.17
LDLRAP1-207ENST00000488127 KDM4AO75164 1064 aa14□□□□□ -0.17
LDLRAP1-207ENST00000488127 KRT24Q2M2I5 525 aa14□□□□□ -0.17
LDLRAP1-207ENST00000488127 HOXC9P31274 260 aa14□□□□□ -0.17
LDLRAP1-207ENST00000488127 NFATC2IPQ8NCF5 419 aa14□□□□□ -0.17
LDLRAP1-207ENST00000488127 PUS7Q96PZ0 661 aaKnown RBP14□□□□□ -0.17
LDLRAP1-207ENST00000488127 NUTM1Q86Y26 1132 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms