RNA–Protein interactions for RNA: ENST00000487952.1

NUP188-207, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 568 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-207ENST00000487952 POTEAQ6S8J7 498 aa18.64■□□□□ 0.57
NUP188-207ENST00000487952 PLEKHO1Q53GL0 409 aaPredicted RBP18.63■□□□□ 0.57
NUP188-207ENST00000487952 DISP2A7MBM2 1401 aa18.63■□□□□ 0.57
NUP188-207ENST00000487952 MEGF6O75095 1541 aa18.63■□□□□ 0.57
NUP188-207ENST00000487952 EXOC5O00471 708 aa18.62■□□□□ 0.57
NUP188-207ENST00000487952 DDB1Q16531 1140 aa18.62■□□□□ 0.57
NUP188-207ENST00000487952 AMOTQ4VCS5 1084 aa18.62■□□□□ 0.57
NUP188-207ENST00000487952 SPG7Q9UQ90 795 aa18.62■□□□□ 0.57
NUP188-207ENST00000487952 PLEKHG2Q9H7P9 1386 aa18.62■□□□□ 0.57
NUP188-207ENST00000487952 OVOS2A0A0G2JMS6 1433 aa18.62■□□□□ 0.57
NUP188-207ENST00000487952 CCDC146Q8IYE0 955 aa18.61■□□□□ 0.57
NUP188-207ENST00000487952 ZCRB1Q8TBF4 217 aaKnown RBP18.61■□□□□ 0.57
NUP188-207ENST00000487952 RUNDC1Q96C34 613 aa18.61■□□□□ 0.57
NUP188-207ENST00000487952 SEPT12Q8IYM1 358 aa18.6■□□□□ 0.57
NUP188-207ENST00000487952 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.6■□□□□ 0.57
NUP188-207ENST00000487952 PARP4Q9UKK3 1724 aaKnown RBP18.6■□□□□ 0.57
NUP188-207ENST00000487952 ONECUT3O60422 494 aaPredicted RBP18.59■□□□□ 0.57
NUP188-207ENST00000487952 GAS2L2Q8NHY3 880 aa18.59■□□□□ 0.57
NUP188-207ENST00000487952 PDE3BQ13370 1112 aa18.58■□□□□ 0.56
NUP188-207ENST00000487952 ZNF530Q6P9A1 599 aaPredicted RBP18.58■□□□□ 0.56
NUP188-207ENST00000487952 PLEKHF1Q96S99 279 aa18.58■□□□□ 0.56
NUP188-207ENST00000487952 WNK3Q9BYP7 1800 aa18.58■□□□□ 0.56
NUP188-207ENST00000487952 TNS2Q63HR2 1409 aa18.57■□□□□ 0.56
NUP188-207ENST00000487952 PCDH11XQ9BZA7 1347 aa18.57■□□□□ 0.56
NUP188-207ENST00000487952 PCDH11YQ9BZA8 1340 aa18.57■□□□□ 0.56
NUP188-207ENST00000487952 C1orf141Q5JVX7 400 aa18.57■□□□□ 0.56
NUP188-207ENST00000487952 DDX54Q8TDD1 881 aaKnown RBP18.56■□□□□ 0.56
NUP188-207ENST00000487952 PHACTR3Q96KR7 559 aa18.56■□□□□ 0.56
NUP188-207ENST00000487952 THSD7AQ9UPZ6 1657 aa18.56■□□□□ 0.56
NUP188-207ENST00000487952 MTHFSDQ2M296 383 aaKnown RBP18.55■□□□□ 0.56
NUP188-207ENST00000487952 NFE2L2Q16236 605 aa18.54■□□□□ 0.56
NUP188-207ENST00000487952 IFNL2Q8IZJ0 200 aa18.54■□□□□ 0.56
NUP188-207ENST00000487952 RGS12O14924 1447 aa18.54■□□□□ 0.56
NUP188-207ENST00000487952 LRRC37A3O60309 1634 aa18.53■□□□□ 0.56
NUP188-207ENST00000487952 APAF1O14727 1248 aa18.53■□□□□ 0.56
NUP188-207ENST00000487952 HSP90AB1P08238 724 aaKnown RBP18.52■□□□□ 0.56
NUP188-207ENST00000487952 PHKG2P15735 406 aa18.52■□□□□ 0.56
NUP188-207ENST00000487952 AKAP4Q5JQC9 854 aa18.52■□□□□ 0.56
NUP188-207ENST00000487952 KRT27Q7Z3Y8 459 aa18.52■□□□□ 0.56
NUP188-207ENST00000487952 PKD1L3Q7Z443 1732 aa18.52■□□□□ 0.55
NUP188-207ENST00000487952 CYP27B1O15528 508 aa18.51■□□□□ 0.55
NUP188-207ENST00000487952 TMPOP42166 694 aaKnown RBP18.51■□□□□ 0.55
NUP188-207ENST00000487952 NEUROD2Q15784 382 aa18.51■□□□□ 0.55
NUP188-207ENST00000487952 RTF1Q92541 710 aaKnown RBP18.51■□□□□ 0.55
NUP188-207ENST00000487952 MAP3K5Q99683 1374 aa18.51■□□□□ 0.55
NUP188-207ENST00000487952 GNAT3A8MTJ3 354 aa18.5■□□□□ 0.55
NUP188-207ENST00000487952 RIPK4P57078 832 aa18.5■□□□□ 0.55
NUP188-207ENST00000487952 LMOD3Q0VAK6 560 aa18.5■□□□□ 0.55
NUP188-207ENST00000487952 RRP7AQ9Y3A4 280 aaKnown RBP18.5■□□□□ 0.55
NUP188-207ENST00000487952 MARCH10Q8NA82 808 aaPredicted RBP18.49■□□□□ 0.55
NUP188-207ENST00000487952 SENP3-EIF4A1A0A087X0R7 540 aa18.47■□□□□ 0.55
NUP188-207ENST00000487952 HTATSF1O43719 755 aaKnown RBP18.46■□□□□ 0.55
NUP188-207ENST00000487952 MPRIPQ6WCQ1 1025 aa18.46■□□□□ 0.55
NUP188-207ENST00000487952 DCAF5Q96JK2 942 aa18.46■□□□□ 0.55
NUP188-207ENST00000487952 SALL2Q9Y467 1007 aaPredicted RBP18.46■□□□□ 0.55
NUP188-207ENST00000487952 NKX1-1Q15270 411 aaPredicted RBP18.45■□□□□ 0.54
NUP188-207ENST00000487952 NGEFQ8N5V2 710 aa18.45■□□□□ 0.54
NUP188-207ENST00000487952 SHANK3Q9BYB0 1731 aa18.45■□□□□ 0.54
NUP188-207ENST00000487952 RNMTO43148 476 aaKnown RBP18.44■□□□□ 0.54
NUP188-207ENST00000487952 HNRNPUQ00839 825 aaKnown RBP eCLIP18.44■□□□□ 0.54
NUP188-207ENST00000487952 FAM182BQ5T319 152 aa18.44■□□□□ 0.54
NUP188-207ENST00000487952 FAM196AQ6ZSG2 479 aa18.43■□□□□ 0.54
NUP188-207ENST00000487952 BRWD3Q6RI45 1802 aa18.42■□□□□ 0.54
NUP188-207ENST00000487952 TEFQ10587 303 aa18.42■□□□□ 0.54
NUP188-207ENST00000487952 DCTN1Q14203 1278 aa18.42■□□□□ 0.54
NUP188-207ENST00000487952 NCBP3Q53F19 620 aaKnown RBP18.42■□□□□ 0.54
NUP188-207ENST00000487952 MCM10Q7L590 875 aa18.42■□□□□ 0.54
NUP188-207ENST00000487952 KDM6AO15550 1401 aaPredicted RBP18.41■□□□□ 0.54
NUP188-207ENST00000487952 ERVV-2B6SEH9 535 aa18.41■□□□□ 0.54
NUP188-207ENST00000487952 CABP4P57796 275 aa18.41■□□□□ 0.54
NUP188-207ENST00000487952 SYTL4Q96C24 671 aaPredicted RBP18.41■□□□□ 0.54
NUP188-207ENST00000487952 ACSBG1Q96GR2 724 aa18.41■□□□□ 0.54
NUP188-207ENST00000487952 LGR6Q9HBX8 967 aa18.41■□□□□ 0.54
NUP188-207ENST00000487952 CALD1Q05682 793 aaKnown RBP18.4■□□□□ 0.54
NUP188-207ENST00000487952 CCDC27Q2M243 656 aa18.4■□□□□ 0.54
NUP188-207ENST00000487952 IL17REQ8NFR9 667 aa18.4■□□□□ 0.54
NUP188-207ENST00000487952 TRIM35Q9UPQ4 493 aa18.4■□□□□ 0.54
NUP188-207ENST00000487952 BCL9O00512 1426 aa18.4■□□□□ 0.54
NUP188-207ENST00000487952 PRIM1P49642 420 aaKnown RBP18.39■□□□□ 0.53
NUP188-207ENST00000487952 THUMPD2Q9BTF0 503 aaKnown RBP18.39■□□□□ 0.53
NUP188-207ENST00000487952 TMOD3Q9NYL9 352 aa18.39■□□□□ 0.53
NUP188-207ENST00000487952 WWC1Q8IX03 1113 aa18.38■□□□□ 0.53
NUP188-207ENST00000487952 DLG5Q8TDM6 1919 aa18.37■□□□□ 0.53
NUP188-207ENST00000487952 YTHDC1Q96MU7 727 aaKnown RBP18.37■□□□□ 0.53
NUP188-207ENST00000487952 SLC52A2Q9HAB3 445 aa18.37■□□□□ 0.53
NUP188-207ENST00000487952 CEMIPQ8WUJ3 1361 aa18.37■□□□□ 0.53
NUP188-207ENST00000487952 NFATC2IPQ8NCF5 419 aa18.35■□□□□ 0.53
NUP188-207ENST00000487952 LAS1LQ9Y4W2 734 aaKnown RBP18.35■□□□□ 0.53
NUP188-207ENST00000487952 KAT6BQ8WYB5 2073 aa18.35■□□□□ 0.53
NUP188-207ENST00000487952 SCN11AQ9UI33 1791 aa18.35■□□□□ 0.53
NUP188-207ENST00000487952 DOT1LQ8TEK3 1739 aa18.35■□□□□ 0.53
NUP188-207ENST00000487952 KCNQ2O43526 872 aa18.34■□□□□ 0.53
NUP188-207ENST00000487952 TRIM37O94972 964 aa18.34■□□□□ 0.53
NUP188-207ENST00000487952 TAF7Q15545 349 aaPredicted RBP18.34■□□□□ 0.53
NUP188-207ENST00000487952 WDR63Q8IWG1 891 aa18.34■□□□□ 0.53
NUP188-207ENST00000487952 ADAMTS7Q9UKP4 1686 aa18.34■□□□□ 0.53
NUP188-207ENST00000487952 MRC1P22897 1456 aa18.33■□□□□ 0.53
NUP188-207ENST00000487952 BTBD11A6QL63 1104 aa18.33■□□□□ 0.52
NUP188-207ENST00000487952 PIGBQ92521 554 aa18.33■□□□□ 0.52
NUP188-207ENST00000487952 BCL11BQ9C0K0 894 aaPredicted RBP18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms