RNA–Protein interactions for RNA: ENST00000487935.1

OPTN-212, Transcript of optineurin, humanhuman

TSL 3

Gene OPTN, Length 511 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-212ENST00000487935 KIF20BQ96Q89 1820 aa16.99■□□□□ 0.31
OPTN-212ENST00000487935 PRIM1P49642 420 aaKnown RBP16.99■□□□□ 0.31
OPTN-212ENST00000487935 SGIP1Q9BQI5 828 aa16.99■□□□□ 0.31
OPTN-212ENST00000487935 FHDC1Q9C0D6 1143 aaPredicted RBP16.99■□□□□ 0.31
OPTN-212ENST00000487935 MEGF6O75095 1541 aa16.99■□□□□ 0.31
OPTN-212ENST00000487935 DOT1LQ8TEK3 1739 aa16.99■□□□□ 0.31
OPTN-212ENST00000487935 SHANK3Q9BYB0 1731 aa16.99■□□□□ 0.31
OPTN-212ENST00000487935 NBPF6Q5VWK0 638 aa16.98■□□□□ 0.31
OPTN-212ENST00000487935 NBPF4Q96M43 638 aa16.98■□□□□ 0.31
OPTN-212ENST00000487935 CGNL1Q0VF96 1302 aa16.97■□□□□ 0.31
OPTN-212ENST00000487935 RAPGEF4Q8WZA2 1011 aa16.97■□□□□ 0.31
OPTN-212ENST00000487935 AKT1S1Q96B36 256 aa16.97■□□□□ 0.31
OPTN-212ENST00000487935 SYT17Q9BSW7 474 aa16.97■□□□□ 0.31
OPTN-212ENST00000487935 TIMELESSQ9UNS1 1208 aa16.97■□□□□ 0.31
OPTN-212ENST00000487935 USHBP1Q8N6Y0 703 aa16.96■□□□□ 0.31
OPTN-212ENST00000487935 ARXQ96QS3 562 aa16.96■□□□□ 0.31
OPTN-212ENST00000487935 QSER1Q2KHR3 1735 aa16.96■□□□□ 0.3
OPTN-212ENST00000487935 INSRP06213 1382 aa16.95■□□□□ 0.3
OPTN-212ENST00000487935 KIF24Q5T7B8 1368 aa16.95■□□□□ 0.3
OPTN-212ENST00000487935 TATP17735 454 aaPredicted RBP16.95■□□□□ 0.3
OPTN-212ENST00000487935 HSP90AB2PQ58FF8 381 aa16.95■□□□□ 0.3
OPTN-212ENST00000487935 SLC16A10Q8TF71 515 aa16.95■□□□□ 0.3
OPTN-212ENST00000487935 LY75O60449 1722 aa16.95■□□□□ 0.3
OPTN-212ENST00000487935 NSD2O96028 1365 aa16.94■□□□□ 0.3
OPTN-212ENST00000487935 FLT4P35916 1363 aa16.94■□□□□ 0.3
OPTN-212ENST00000487935 KCNQ4P56696 695 aa16.93■□□□□ 0.3
OPTN-212ENST00000487935 TFCP2L1Q9NZI6 479 aa16.93■□□□□ 0.3
OPTN-212ENST00000487935 CARD14Q9BXL6 1004 aa16.92■□□□□ 0.3
OPTN-212ENST00000487935 NSD3Q9BZ95 1437 aa16.92■□□□□ 0.3
OPTN-212ENST00000487935 PNPLA7Q6ZV29 1317 aa16.92■□□□□ 0.3
OPTN-212ENST00000487935 MAP3K5Q99683 1374 aa16.91■□□□□ 0.3
OPTN-212ENST00000487935 POLD1P28340 1107 aa16.91■□□□□ 0.3
OPTN-212ENST00000487935 CCNL1Q9UK58 526 aaPredicted RBP16.91■□□□□ 0.3
OPTN-212ENST00000487935 PCDH11XQ9BZA7 1347 aa16.91■□□□□ 0.3
OPTN-212ENST00000487935 PCDH11YQ9BZA8 1340 aa16.91■□□□□ 0.3
OPTN-212ENST00000487935 TUBGCP6Q96RT7 1819 aa16.9■□□□□ 0.3
OPTN-212ENST00000487935 EMILIN1Q9Y6C2 1016 aa16.89■□□□□ 0.29
OPTN-212ENST00000487935 COL24A1Q17RW2 1714 aa16.88■□□□□ 0.29
OPTN-212ENST00000487935 UTRNP46939 3433 aa16.87■□□□□ 0.29
OPTN-212ENST00000487935 PPM1GO15355 546 aaPredicted RBP16.87■□□□□ 0.29
OPTN-212ENST00000487935 HMGB2P26583 209 aaKnown RBP16.87■□□□□ 0.29
OPTN-212ENST00000487935 KLHL34Q8N239 644 aa16.86■□□□□ 0.29
OPTN-212ENST00000487935 CYP27B1O15528 508 aa16.85■□□□□ 0.29
OPTN-212ENST00000487935 MSH5O43196 834 aa16.85■□□□□ 0.29
OPTN-212ENST00000487935 MPRIPQ6WCQ1 1025 aa16.85■□□□□ 0.29
OPTN-212ENST00000487935 PKD1L3Q7Z443 1732 aa16.84■□□□□ 0.29
OPTN-212ENST00000487935 ANKRD26Q9UPS8 1709 aa16.84■□□□□ 0.29
OPTN-212ENST00000487935 MAP2P11137 1827 aaKnown RBP16.84■□□□□ 0.29
OPTN-212ENST00000487935 CHD4Q14839 1912 aa16.84■□□□□ 0.29
OPTN-212ENST00000487935 GPR162Q16538 588 aa16.84■□□□□ 0.29
OPTN-212ENST00000487935 POLR3GLQ9BT43 218 aa16.84■□□□□ 0.29
OPTN-212ENST00000487935 WASHC2AQ641Q2 1341 aa16.84■□□□□ 0.29
OPTN-212ENST00000487935 NCAPD2Q15021 1401 aa16.84■□□□□ 0.29
OPTN-212ENST00000487935 C5P01031 1676 aa16.83■□□□□ 0.28
OPTN-212ENST00000487935 COL23A1Q86Y22 540 aaPredicted RBP16.83■□□□□ 0.28
OPTN-212ENST00000487935 PALLDQ8WX93 1383 aa16.83■□□□□ 0.28
OPTN-212ENST00000487935 SPG7Q9UQ90 795 aa16.83■□□□□ 0.28
OPTN-212ENST00000487935 ITGB4P16144 1822 aa16.82■□□□□ 0.28
OPTN-212ENST00000487935 ZNF784Q8NCA9 323 aaPredicted RBP16.82■□□□□ 0.28
OPTN-212ENST00000487935 SMARCC1Q92922 1105 aaPredicted RBP16.82■□□□□ 0.28
OPTN-212ENST00000487935 TOGARAM1Q9Y4F4 1720 aa16.82■□□□□ 0.28
OPTN-212ENST00000487935 NKX1-1Q15270 411 aaPredicted RBP16.81■□□□□ 0.28
OPTN-212ENST00000487935 FLAD1Q8NFF5 587 aa16.81■□□□□ 0.28
OPTN-212ENST00000487935 EYA1Q99502 592 aa16.81■□□□□ 0.28
OPTN-212ENST00000487935 POLKQ9UBT6 870 aa16.81■□□□□ 0.28
OPTN-212ENST00000487935 TAF1LQ8IZX4 1826 aa16.81■□□□□ 0.28
OPTN-212ENST00000487935 EIF4G2P78344 907 aaKnown RBP eCLIP16.79■□□□□ 0.28
OPTN-212ENST00000487935 PELP1Q8IZL8 1130 aaKnown RBP16.79■□□□□ 0.28
OPTN-212ENST00000487935 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.79■□□□□ 0.28
OPTN-212ENST00000487935 ZEB1P37275 1124 aaPredicted RBP16.78■□□□□ 0.28
OPTN-212ENST00000487935 MSL1Q68DK7 614 aa16.78■□□□□ 0.28
OPTN-212ENST00000487935 NLGN2Q8NFZ4 835 aa16.78■□□□□ 0.28
OPTN-212ENST00000487935 PIGBQ92521 554 aa16.78■□□□□ 0.28
OPTN-212ENST00000487935 C4BP0C0L5 1744 aa16.77■□□□□ 0.28
OPTN-212ENST00000487935 TNNT2P45379 298 aaPredicted RBP16.77■□□□□ 0.28
OPTN-212ENST00000487935 IFNL2Q8IZJ0 200 aa16.77■□□□□ 0.28
OPTN-212ENST00000487935 AK7Q96M32 723 aa16.77■□□□□ 0.28
OPTN-212ENST00000487935 HSPA5P11021 654 aaKnown RBP16.76■□□□□ 0.27
OPTN-212ENST00000487935 EIF4A2Q14240 407 aaKnown RBP16.76■□□□□ 0.27
OPTN-212ENST00000487935 TMOD3Q9NYL9 352 aa16.76■□□□□ 0.27
OPTN-212ENST00000487935 PHKG2P15735 406 aa16.75■□□□□ 0.27
OPTN-212ENST00000487935 PANK3Q9H999 370 aa16.75■□□□□ 0.27
OPTN-212ENST00000487935 GOLGB1Q14789 3259 aaKnown RBP16.74■□□□□ 0.27
OPTN-212ENST00000487935 LOC102724428A0A0B4J2F2 783 aa16.74■□□□□ 0.27
OPTN-212ENST00000487935 SIK1P57059 783 aa16.74■□□□□ 0.27
OPTN-212ENST00000487935 PLEKHG2Q9H7P9 1386 aa16.74■□□□□ 0.27
OPTN-212ENST00000487935 GRIN3BO60391 1043 aa16.73■□□□□ 0.27
OPTN-212ENST00000487935 UBR3Q6ZT12 1888 aa16.72■□□□□ 0.27
OPTN-212ENST00000487935 PHF14O94880 888 aa16.72■□□□□ 0.27
OPTN-212ENST00000487935 ASAP1Q9ULH1 1129 aa16.72■□□□□ 0.27
OPTN-212ENST00000487935 CD2APQ9Y5K6 639 aa16.72■□□□□ 0.27
OPTN-212ENST00000487935 IGSF1Q8N6C5 1336 aa16.71■□□□□ 0.27
OPTN-212ENST00000487935 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.71■□□□□ 0.27
OPTN-212ENST00000487935 SSFA2P28290 1259 aa16.71■□□□□ 0.27
OPTN-212ENST00000487935 AMIGO3Q86WK7 504 aa16.71■□□□□ 0.27
OPTN-212ENST00000487935 LINC00116Q8NCU8 138 aa16.71■□□□□ 0.27
OPTN-212ENST00000487935 YBX3P16989 372 aaKnown RBP eCLIP16.7■□□□□ 0.26
OPTN-212ENST00000487935 ATP6V1AP38606 617 aa16.7■□□□□ 0.26
OPTN-212ENST00000487935 PLEKHO1Q53GL0 409 aaPredicted RBP16.69■□□□□ 0.26
OPTN-212ENST00000487935 SMIM5Q71RC9 77 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms