RNA–Protein interactions for RNA: ENST00000487703.5

CDK5-205, Transcript of cyclin dependent kinase 5, humanhuman

TSL 5

Gene CDK5, Length 922 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5-205ENST00000487703 RTL1A6NKG5 1358 aa17.23■□□□□ 0.35
CDK5-205ENST00000487703 NSD2O96028 1365 aa17.23■□□□□ 0.35
CDK5-205ENST00000487703 TUBGCP6Q96RT7 1819 aa17.22■□□□□ 0.35
CDK5-205ENST00000487703 FYB1O15117 783 aa17.22■□□□□ 0.35
CDK5-205ENST00000487703 PRIM1P49642 420 aaKnown RBP17.22■□□□□ 0.35
CDK5-205ENST00000487703 ZCRB1Q8TBF4 217 aaKnown RBP17.22■□□□□ 0.35
CDK5-205ENST00000487703 CHD4Q14839 1912 aa17.21■□□□□ 0.35
CDK5-205ENST00000487703 SLC16A10Q8TF71 515 aa17.21■□□□□ 0.35
CDK5-205ENST00000487703 TMF1P82094 1093 aa17.2■□□□□ 0.34
CDK5-205ENST00000487703 RRS1Q15050 365 aaKnown RBP17.2■□□□□ 0.34
CDK5-205ENST00000487703 NBPF6Q5VWK0 638 aa17.2■□□□□ 0.34
CDK5-205ENST00000487703 NBPF4Q96M43 638 aa17.2■□□□□ 0.34
CDK5-205ENST00000487703 GGNBP2Q9H3C7 697 aa17.2■□□□□ 0.34
CDK5-205ENST00000487703 PNPLA7Q6ZV29 1317 aa17.2■□□□□ 0.34
CDK5-205ENST00000487703 USP47Q96K76 1375 aa17.19■□□□□ 0.34
CDK5-205ENST00000487703 SYTL4Q96C24 671 aaPredicted RBP17.19■□□□□ 0.34
CDK5-205ENST00000487703 KIF20BQ96Q89 1820 aa17.19■□□□□ 0.34
CDK5-205ENST00000487703 CGNL1Q0VF96 1302 aa17.19■□□□□ 0.34
CDK5-205ENST00000487703 KCNQ4P56696 695 aa17.18■□□□□ 0.34
CDK5-205ENST00000487703 UTRNP46939 3433 aa17.18■□□□□ 0.34
CDK5-205ENST00000487703 ZNF784Q8NCA9 323 aaPredicted RBP17.17■□□□□ 0.34
CDK5-205ENST00000487703 TFCP2L1Q9NZI6 479 aa17.16■□□□□ 0.34
CDK5-205ENST00000487703 INSRP06213 1382 aa17.15■□□□□ 0.34
CDK5-205ENST00000487703 KIF24Q5T7B8 1368 aa17.15■□□□□ 0.34
CDK5-205ENST00000487703 SMG6Q86US8 1419 aaKnown RBP17.15■□□□□ 0.34
CDK5-205ENST00000487703 HSP90AB2PQ58FF8 381 aa17.15■□□□□ 0.34
CDK5-205ENST00000487703 USHBP1Q8N6Y0 703 aa17.15■□□□□ 0.34
CDK5-205ENST00000487703 POLD1P28340 1107 aa17.14■□□□□ 0.33
CDK5-205ENST00000487703 CDCA8Q53HL2 280 aa17.14■□□□□ 0.33
CDK5-205ENST00000487703 RAPGEF4Q8WZA2 1011 aa17.14■□□□□ 0.33
CDK5-205ENST00000487703 CCNL1Q9UK58 526 aaPredicted RBP17.14■□□□□ 0.33
CDK5-205ENST00000487703 FLT4P35916 1363 aa17.14■□□□□ 0.33
CDK5-205ENST00000487703 TATP17735 454 aaPredicted RBP17.12■□□□□ 0.33
CDK5-205ENST00000487703 CARD14Q9BXL6 1004 aa17.12■□□□□ 0.33
CDK5-205ENST00000487703 CLSPNQ9HAW4 1339 aa17.12■□□□□ 0.33
CDK5-205ENST00000487703 C5P01031 1676 aa17.11■□□□□ 0.33
CDK5-205ENST00000487703 PCDH11XQ9BZA7 1347 aa17.11■□□□□ 0.33
CDK5-205ENST00000487703 PCDH11YQ9BZA8 1340 aa17.11■□□□□ 0.33
CDK5-205ENST00000487703 TAF1LQ8IZX4 1826 aa17.1■□□□□ 0.33
CDK5-205ENST00000487703 COL23A1Q86Y22 540 aaPredicted RBP17.1■□□□□ 0.33
CDK5-205ENST00000487703 PKD1L3Q7Z443 1732 aa17.1■□□□□ 0.33
CDK5-205ENST00000487703 ANKRD26Q9UPS8 1709 aa17.1■□□□□ 0.33
CDK5-205ENST00000487703 GPR162Q16538 588 aa17.09■□□□□ 0.33
CDK5-205ENST00000487703 NCAPD2Q15021 1401 aa17.09■□□□□ 0.33
CDK5-205ENST00000487703 TOGARAM1Q9Y4F4 1720 aa17.09■□□□□ 0.33
CDK5-205ENST00000487703 ITGB4P16144 1822 aa17.09■□□□□ 0.33
CDK5-205ENST00000487703 CYP27B1O15528 508 aa17.08■□□□□ 0.32
CDK5-205ENST00000487703 KLHL34Q8N239 644 aa17.08■□□□□ 0.32
CDK5-205ENST00000487703 NSD3Q9BZ95 1437 aa17.07■□□□□ 0.32
CDK5-205ENST00000487703 NLGN2Q8NFZ4 835 aa17.07■□□□□ 0.32
CDK5-205ENST00000487703 EMILIN1Q9Y6C2 1016 aa17.07■□□□□ 0.32
CDK5-205ENST00000487703 PALLDQ8WX93 1383 aa17.06■□□□□ 0.32
CDK5-205ENST00000487703 HMGB2P26583 209 aaKnown RBP17.06■□□□□ 0.32
CDK5-205ENST00000487703 MPRIPQ6WCQ1 1025 aa17.06■□□□□ 0.32
CDK5-205ENST00000487703 MAP2P11137 1827 aaKnown RBP17.05■□□□□ 0.32
CDK5-205ENST00000487703 TIMELESSQ9UNS1 1208 aa17.05■□□□□ 0.32
CDK5-205ENST00000487703 WASHC2AQ641Q2 1341 aa17.04■□□□□ 0.32
CDK5-205ENST00000487703 NKX1-1Q15270 411 aaPredicted RBP17.04■□□□□ 0.32
CDK5-205ENST00000487703 C4BP0C0L5 1744 aa17.04■□□□□ 0.32
CDK5-205ENST00000487703 MSH5O43196 834 aa17.03■□□□□ 0.32
CDK5-205ENST00000487703 FLAD1Q8NFF5 587 aa17.03■□□□□ 0.32
CDK5-205ENST00000487703 CCER1Q8TC90 406 aaPredicted RBP17.03■□□□□ 0.32
CDK5-205ENST00000487703 PELP1Q8IZL8 1130 aaKnown RBP17.02■□□□□ 0.32
CDK5-205ENST00000487703 SMARCC1Q92922 1105 aaPredicted RBP17.02■□□□□ 0.32
CDK5-205ENST00000487703 UBR3Q6ZT12 1888 aa17.01■□□□□ 0.31
CDK5-205ENST00000487703 YBX3P16989 372 aaKnown RBP eCLIP17.01■□□□□ 0.31
CDK5-205ENST00000487703 MSL1Q68DK7 614 aa17.01■□□□□ 0.31
CDK5-205ENST00000487703 PIGBQ92521 554 aa17.01■□□□□ 0.31
CDK5-205ENST00000487703 EYA1Q99502 592 aa17.01■□□□□ 0.31
CDK5-205ENST00000487703 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.01■□□□□ 0.31
CDK5-205ENST00000487703 GOLGB1Q14789 3259 aaKnown RBP17.01■□□□□ 0.31
CDK5-205ENST00000487703 PPM1GO15355 546 aaPredicted RBP17■□□□□ 0.31
CDK5-205ENST00000487703 C1QTNF8P60827 252 aa17■□□□□ 0.31
CDK5-205ENST00000487703 POLKQ9UBT6 870 aa17■□□□□ 0.31
CDK5-205ENST00000487703 SPG7Q9UQ90 795 aa17■□□□□ 0.31
CDK5-205ENST00000487703 GRIN3BO60391 1043 aa16.99■□□□□ 0.31
CDK5-205ENST00000487703 AMIGO3Q86WK7 504 aa16.99■□□□□ 0.31
CDK5-205ENST00000487703 CD2APQ9Y5K6 639 aa16.99■□□□□ 0.31
CDK5-205ENST00000487703 AK7Q96M32 723 aa16.97■□□□□ 0.31
CDK5-205ENST00000487703 LOC102724428A0A0B4J2F2 783 aa16.96■□□□□ 0.31
CDK5-205ENST00000487703 SIK1P57059 783 aa16.96■□□□□ 0.31
CDK5-205ENST00000487703 PLEKHG2Q9H7P9 1386 aa16.95■□□□□ 0.3
CDK5-205ENST00000487703 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.95■□□□□ 0.3
CDK5-205ENST00000487703 PHKG2P15735 406 aa16.95■□□□□ 0.3
CDK5-205ENST00000487703 IFNL2Q8IZJ0 200 aa16.95■□□□□ 0.3
CDK5-205ENST00000487703 LINC00116Q8NCU8 138 aa16.95■□□□□ 0.3
CDK5-205ENST00000487703 SSFA2P28290 1259 aa16.94■□□□□ 0.3
CDK5-205ENST00000487703 EIF4A2Q14240 407 aaKnown RBP16.94■□□□□ 0.3
CDK5-205ENST00000487703 SMIM5Q71RC9 77 aa16.94■□□□□ 0.3
CDK5-205ENST00000487703 TMOD3Q9NYL9 352 aa16.94■□□□□ 0.3
CDK5-205ENST00000487703 ASAP1Q9ULH1 1129 aa16.94■□□□□ 0.3
CDK5-205ENST00000487703 SENP3-EIF4A1A0A087X0R7 540 aa16.93■□□□□ 0.3
CDK5-205ENST00000487703 GIGYF1O75420 1035 aaPredicted RBP16.93■□□□□ 0.3
CDK5-205ENST00000487703 ITPK1Q13572 414 aa16.93■□□□□ 0.3
CDK5-205ENST00000487703 PHF14O94880 888 aa16.92■□□□□ 0.3
CDK5-205ENST00000487703 ATG3Q9NT62 314 aa16.91■□□□□ 0.3
CDK5-205ENST00000487703 IGSF1Q8N6C5 1336 aa16.91■□□□□ 0.3
CDK5-205ENST00000487703 ZNF831Q5JPB2 1677 aa16.91■□□□□ 0.3
CDK5-205ENST00000487703 ATP6V1AP38606 617 aa16.9■□□□□ 0.3
CDK5-205ENST00000487703 TNNT2P45379 298 aaPredicted RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms