RNA–Protein interactions for RNA: ENST00000487563.1

PLOD3-215, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, human

TSL 2

Gene PLOD3, Length 712 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLOD3-215	ENST00000487563	HSP90AB2P	Q58FF8	381 aa		32.63	■■■□□ 2.81
PLOD3-215	ENST00000487563	RAPGEF4	Q8WZA2	1011 aa		32.63	■■■□□ 2.81
PLOD3-215	ENST00000487563	HSPA5	P11021	654 aa	Known RBP	32.62	■■■□□ 2.81
PLOD3-215	ENST00000487563	CASZ1	Q86V15	1759 aa		32.6	■■■□□ 2.81
PLOD3-215	ENST00000487563	SYTL4	Q96C24	671 aa	Predicted RBP	32.6	■■■□□ 2.81
PLOD3-215	ENST00000487563	SLC15A2	Q16348	729 aa		32.59	■■■□□ 2.81
PLOD3-215	ENST00000487563	EMILIN1	Q9Y6C2	1016 aa		32.59	■■■□□ 2.81
PLOD3-215	ENST00000487563	SHANK3	Q9BYB0	1731 aa		32.58	■■■□□ 2.81
PLOD3-215	ENST00000487563	PPM1G	O15355	546 aa	Predicted RBP	32.58	■■■□□ 2.81
PLOD3-215	ENST00000487563	DOT1L	Q8TEK3	1739 aa		32.57	■■■□□ 2.81
PLOD3-215	ENST00000487563	TAT	P17735	454 aa	Predicted RBP	32.57	■■■□□ 2.8
PLOD3-215	ENST00000487563	PDGFD	Q9GZP0	370 aa	Predicted RBP	32.55	■■■□□ 2.8
PLOD3-215	ENST00000487563	ZBTB7A	O95365	584 aa		32.54	■■■□□ 2.8
PLOD3-215	ENST00000487563	PRIM1	P49642	420 aa	Known RBP	32.54	■■■□□ 2.8
PLOD3-215	ENST00000487563	PAPPA	Q13219	1627 aa		32.51	■■■□□ 2.8
PLOD3-215	ENST00000487563	ANKRD26	Q9UPS8	1709 aa		32.51	■■■□□ 2.79
PLOD3-215	ENST00000487563	PCDH11X	Q9BZA7	1347 aa		32.49	■■■□□ 2.79
PLOD3-215	ENST00000487563	PCDH11Y	Q9BZA8	1340 aa		32.49	■■■□□ 2.79
PLOD3-215	ENST00000487563	SLC27A3	Q5K4L6	730 aa		32.48	■■■□□ 2.79
PLOD3-215	ENST00000487563	LRRC4B	Q9NT99	713 aa		32.48	■■■□□ 2.79
PLOD3-215	ENST00000487563	ATF5	Q9Y2D1	282 aa	Predicted RBP	32.47	■■■□□ 2.79
PLOD3-215	ENST00000487563	MAP2	P11137	1827 aa	Known RBP	32.47	■■■□□ 2.79
PLOD3-215	ENST00000487563	TNNT2	P45379	298 aa	Predicted RBP	32.46	■■■□□ 2.79
PLOD3-215	ENST00000487563	PANK3	Q9H999	370 aa		32.46	■■■□□ 2.79
PLOD3-215	ENST00000487563	WASHC2A	Q641Q2	1341 aa		32.46	■■■□□ 2.79
PLOD3-215	ENST00000487563	NSD2	O96028	1365 aa		32.45	■■■□□ 2.79
PLOD3-215	ENST00000487563	ZNF827	Q17R98	1081 aa		32.44	■■■□□ 2.78
PLOD3-215	ENST00000487563	MTFR1L	Q9H019	292 aa		32.43	■■■□□ 2.78
PLOD3-215	ENST00000487563	POLK	Q9UBT6	870 aa		32.43	■■■□□ 2.78
PLOD3-215	ENST00000487563	NCAPD2	Q15021	1401 aa		32.4	■■■□□ 2.78
PLOD3-215	ENST00000487563	DCAF8L1	A6NGE4	600 aa		32.39	■■■□□ 2.78
PLOD3-215	ENST00000487563	PTGER2	P43116	358 aa		32.39	■■■□□ 2.78
PLOD3-215	ENST00000487563	LY75	O60449	1722 aa		32.39	■■■□□ 2.78
PLOD3-215	ENST00000487563	PKD1L3	Q7Z443	1732 aa		32.38	■■■□□ 2.77
PLOD3-215	ENST00000487563	KCNQ4	P56696	695 aa		32.38	■■■□□ 2.77
PLOD3-215	ENST00000487563	AKT1S1	Q96B36	256 aa		32.37	■■■□□ 2.77
PLOD3-215	ENST00000487563	EYA1	Q99502	592 aa		32.37	■■■□□ 2.77
PLOD3-215	ENST00000487563	CCNL1	Q9UK58	526 aa	Predicted RBP	32.37	■■■□□ 2.77
PLOD3-215	ENST00000487563	SPG7	Q9UQ90	795 aa		32.37	■■■□□ 2.77
PLOD3-215	ENST00000487563	CYP27B1	O15528	508 aa		32.36	■■■□□ 2.77
PLOD3-215	ENST00000487563	TFCP2L1	Q9NZI6	479 aa		32.35	■■■□□ 2.77
PLOD3-215	ENST00000487563	EIF4A2	Q14240	407 aa	Known RBP	32.33	■■■□□ 2.77
PLOD3-215	ENST00000487563	QSER1	Q2KHR3	1735 aa		32.32	■■■□□ 2.76
PLOD3-215	ENST00000487563	MPRIP	Q6WCQ1	1025 aa		32.32	■■■□□ 2.76
PLOD3-215	ENST00000487563	MORC1	Q86VD1	984 aa		32.31	■■■□□ 2.76
PLOD3-215	ENST00000487563	KNSTRN	Q9Y448	316 aa		32.31	■■■□□ 2.76
PLOD3-215	ENST00000487563	PNPLA7	Q6ZV29	1317 aa		32.29	■■■□□ 2.76
PLOD3-215	ENST00000487563	TOGARAM1	Q9Y4F4	1720 aa		32.29	■■■□□ 2.76
PLOD3-215	ENST00000487563	SLC16A10	Q8TF71	515 aa		32.28	■■■□□ 2.76
PLOD3-215	ENST00000487563	SGIP1	Q9BQI5	828 aa		32.28	■■■□□ 2.76
PLOD3-215	ENST00000487563	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	32.28	■■■□□ 2.76
PLOD3-215	ENST00000487563	PALLD	Q8WX93	1383 aa		32.28	■■■□□ 2.76
PLOD3-215	ENST00000487563	FHDC1	Q9C0D6	1143 aa	Predicted RBP	32.27	■■■□□ 2.76
PLOD3-215	ENST00000487563	TUBGCP6	Q96RT7	1819 aa		32.27	■■■□□ 2.76
PLOD3-215	ENST00000487563	ARX	Q96QS3	562 aa		32.26	■■■□□ 2.75
PLOD3-215	ENST00000487563	ITGB4	P16144	1822 aa		32.25	■■■□□ 2.75
PLOD3-215	ENST00000487563	KIF7	Q2M1P5	1343 aa		32.25	■■■□□ 2.75
PLOD3-215	ENST00000487563	NKX1-1	Q15270	411 aa	Predicted RBP	32.24	■■■□□ 2.75
PLOD3-215	ENST00000487563	SMARCC1	Q92922	1105 aa	Predicted RBP	32.24	■■■□□ 2.75
PLOD3-215	ENST00000487563	HMGB2	P26583	209 aa	Known RBP	32.23	■■■□□ 2.75
PLOD3-215	ENST00000487563	IFNL2	Q8IZJ0	200 aa		32.23	■■■□□ 2.75
PLOD3-215	ENST00000487563	C5	P01031	1676 aa		32.23	■■■□□ 2.75
PLOD3-215	ENST00000487563	IGSF1	Q8N6C5	1336 aa		32.23	■■■□□ 2.75
PLOD3-215	ENST00000487563	MSH5	O43196	834 aa		32.22	■■■□□ 2.75
PLOD3-215	ENST00000487563	POLD1	P28340	1107 aa		32.22	■■■□□ 2.75
PLOD3-215	ENST00000487563	SYT17	Q9BSW7	474 aa		32.22	■■■□□ 2.75
PLOD3-215	ENST00000487563	PHKG2	P15735	406 aa		32.2	■■■□□ 2.75
PLOD3-215	ENST00000487563	PIGB	Q92521	554 aa		32.2	■■■□□ 2.75
PLOD3-215	ENST00000487563	PLEKHG2	Q9H7P9	1386 aa		32.19	■■■□□ 2.74
PLOD3-215	ENST00000487563	TMOD3	Q9NYL9	352 aa		32.19	■■■□□ 2.74
PLOD3-215	ENST00000487563	YY1	P25490	414 aa		32.17	■■■□□ 2.74
PLOD3-215	ENST00000487563	KLHL34	Q8N239	644 aa		32.16	■■■□□ 2.74
PLOD3-215	ENST00000487563	TAF1L	Q8IZX4	1826 aa		32.14	■■■□□ 2.74
PLOD3-215	ENST00000487563	AMER1	Q5JTC6	1135 aa	Predicted RBP	32.14	■■■□□ 2.74
PLOD3-215	ENST00000487563	PLEKHO1	Q53GL0	409 aa	Predicted RBP	32.13	■■■□□ 2.73
PLOD3-215	ENST00000487563	COL23A1	Q86Y22	540 aa	Predicted RBP	32.13	■■■□□ 2.73
PLOD3-215	ENST00000487563	MAP3K5	Q99683	1374 aa		32.13	■■■□□ 2.73
PLOD3-215	ENST00000487563	AK7	Q96M32	723 aa		32.12	■■■□□ 2.73
PLOD3-215	ENST00000487563	COL24A1	Q17RW2	1714 aa		32.12	■■■□□ 2.73
PLOD3-215	ENST00000487563	FLAD1	Q8NFF5	587 aa		32.11	■■■□□ 2.73
PLOD3-215	ENST00000487563	C4B	P0C0L5	1744 aa		32.11	■■■□□ 2.73
PLOD3-215	ENST00000487563	HSP90AB1	P08238	724 aa	Known RBP	32.1	■■■□□ 2.73
PLOD3-215	ENST00000487563	AMOT	Q4VCS5	1084 aa		32.09	■■■□□ 2.73
PLOD3-215	ENST00000487563	ZNF530	Q6P9A1	599 aa	Predicted RBP	32.09	■■■□□ 2.73
PLOD3-215	ENST00000487563	LOC102724428	A0A0B4J2F2	783 aa		32.08	■■■□□ 2.73
PLOD3-215	ENST00000487563	SIK1	P57059	783 aa		32.08	■■■□□ 2.73
PLOD3-215	ENST00000487563	AEBP1	Q8IUX7	1158 aa		32.08	■■■□□ 2.73
PLOD3-215	ENST00000487563	ASAP1	Q9ULH1	1129 aa		32.08	■■■□□ 2.73
PLOD3-215	ENST00000487563	MSL1	Q68DK7	614 aa		32.06	■■■□□ 2.72
PLOD3-215	ENST00000487563	SULT6B1	Q6IMI4	303 aa		32.06	■■■□□ 2.72
PLOD3-215	ENST00000487563	DCAF5	Q96JK2	942 aa		32.06	■■■□□ 2.72
PLOD3-215	ENST00000487563	C1orf141	Q5JVX7	400 aa		32.05	■■■□□ 2.72
PLOD3-215	ENST00000487563	ERVV-2	B6SEH9	535 aa		32.04	■■■□□ 2.72
PLOD3-215	ENST00000487563	CC2D1B	Q5T0F9	858 aa	Known RBP	32.04	■■■□□ 2.72
PLOD3-215	ENST00000487563	PHF14	O94880	888 aa		32.03	■■■□□ 2.72
PLOD3-215	ENST00000487563	IL13	P35225	146 aa		32.03	■■■□□ 2.72
PLOD3-215	ENST00000487563	ATG3	Q9NT62	314 aa		32.03	■■■□□ 2.72
PLOD3-215	ENST00000487563	ATP6V1A	P38606	617 aa		32.02	■■■□□ 2.72
PLOD3-215	ENST00000487563	MTHFS	P49914	203 aa		32.02	■■■□□ 2.72
PLOD3-215	ENST00000487563	LINC00116	Q8NCU8	138 aa		32.01	■■■□□ 2.71

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