RNA–Protein interactions for RNA: ENST00000487462.1

CDK11A-217, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 5

Gene CDK11A, Length 437 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-217ENST00000487462 TNS4Q8IZW8 715 aa14.2□□□□□ -0.14
CDK11A-217ENST00000487462 TNS2Q63HR2 1409 aa14.19□□□□□ -0.14
CDK11A-217ENST00000487462 CDCA7Q9BWT1 371 aaPredicted RBP14.19□□□□□ -0.14
CDK11A-217ENST00000487462 SLIT3O75094 1523 aa14.19□□□□□ -0.14
CDK11A-217ENST00000487462 WDR17Q8IZU2 1322 aa14.18□□□□□ -0.14
CDK11A-217ENST00000487462 FAM212AQ96EL1 285 aa14.18□□□□□ -0.14
CDK11A-217ENST00000487462 ABCC6O95255 1503 aa14.18□□□□□ -0.14
CDK11A-217ENST00000487462 TRPM1Q7Z4N2 1603 aa14.18□□□□□ -0.14
CDK11A-217ENST00000487462 BRD4O60885 1362 aaPredicted RBP14.17□□□□□ -0.14
CDK11A-217ENST00000487462 ZBTB7CA1YPR0 619 aa14.16□□□□□ -0.14
CDK11A-217ENST00000487462 JMYQ8N9B5 988 aa14.16□□□□□ -0.14
CDK11A-217ENST00000487462 ACSBG1Q96GR2 724 aa14.16□□□□□ -0.14
CDK11A-217ENST00000487462 AXIN2Q9Y2T1 843 aa14.16□□□□□ -0.14
CDK11A-217ENST00000487462 USP6P35125 1406 aa14.15□□□□□ -0.14
CDK11A-217ENST00000487462 KAT6BQ8WYB5 2073 aa14.15□□□□□ -0.14
CDK11A-217ENST00000487462 HAX1O00165 279 aa14.15□□□□□ -0.14
CDK11A-217ENST00000487462 NLRP13Q86W25 1043 aa14.15□□□□□ -0.14
CDK11A-217ENST00000487462 PLEKHG3A1L390 1219 aa14.14□□□□□ -0.15
CDK11A-217ENST00000487462 NUBP1P53384 320 aa14.14□□□□□ -0.15
CDK11A-217ENST00000487462 EXOC5O00471 708 aa14.13□□□□□ -0.15
CDK11A-217ENST00000487462 CD44P16070 742 aaKnown RBP14.13□□□□□ -0.15
CDK11A-217ENST00000487462 GSE1Q14687 1217 aa14.13□□□□□ -0.15
CDK11A-217ENST00000487462 KLRG1Q96E93 195 aa14.13□□□□□ -0.15
CDK11A-217ENST00000487462 CARD10Q9BWT7 1032 aa14.13□□□□□ -0.15
CDK11A-217ENST00000487462 PIK3C2AO00443 1686 aa14.12□□□□□ -0.15
CDK11A-217ENST00000487462 CPSF1Q10570 1443 aaKnown RBP14.12□□□□□ -0.15
CDK11A-217ENST00000487462 LY75O60449 1722 aa14.11□□□□□ -0.15
CDK11A-217ENST00000487462 HTRA3P83110 453 aa14.11□□□□□ -0.15
CDK11A-217ENST00000487462 CDK19Q9BWU1 502 aa14.11□□□□□ -0.15
CDK11A-217ENST00000487462 TFCP2L1Q9NZI6 479 aa14.11□□□□□ -0.15
CDK11A-217ENST00000487462 CCDC61Q9Y6R9 512 aa14.11□□□□□ -0.15
CDK11A-217ENST00000487462 PPIP5K1Q6PFW1 1433 aa14.1□□□□□ -0.15
CDK11A-217ENST00000487462 TOMM70O94826 608 aa14.1□□□□□ -0.15
CDK11A-217ENST00000487462 DCAF8Q5TAQ9 597 aa14.1□□□□□ -0.15
CDK11A-217ENST00000487462 CICQ96RK0 1608 aaPredicted RBP14.1□□□□□ -0.15
CDK11A-217ENST00000487462 C19orf67A6NJJ6 358 aa14.09□□□□□ -0.15
CDK11A-217ENST00000487462 SLC27A3Q5K4L6 730 aa14.09□□□□□ -0.15
CDK11A-217ENST00000487462 RASEFQ8IZ41 740 aa14.09□□□□□ -0.15
CDK11A-217ENST00000487462 KCNQ4P56696 695 aa14.08□□□□□ -0.16
CDK11A-217ENST00000487462 TSPYL2Q9H2G4 693 aaPredicted RBP14.08□□□□□ -0.16
CDK11A-217ENST00000487462 CIZ1Q9ULV3 898 aaPredicted RBP14.08□□□□□ -0.16
CDK11A-217ENST00000487462 CD2APQ9Y5K6 639 aa14.08□□□□□ -0.16
CDK11A-217ENST00000487462 CCDC7Q96M83 1385 aa14.08□□□□□ -0.16
CDK11A-217ENST00000487462 NLRP6P59044 892 aa14.06□□□□□ -0.16
CDK11A-217ENST00000487462 MSL1Q68DK7 614 aa14.06□□□□□ -0.16
CDK11A-217ENST00000487462 MPHOSPH9Q99550 1183 aa14.06□□□□□ -0.16
CDK11A-217ENST00000487462 CSB-PGBD3P0DP91 1061 aa14.05□□□□□ -0.16
CDK11A-217ENST00000487462 AMER1Q5JTC6 1135 aaPredicted RBP14.05□□□□□ -0.16
CDK11A-217ENST00000487462 ARHGEF25Q86VW2 580 aa14.05□□□□□ -0.16
CDK11A-217ENST00000487462 WWC3Q9ULE0 1092 aa14.05□□□□□ -0.16
CDK11A-217ENST00000487462 QRICH2Q9H0J4 1663 aa14.04□□□□□ -0.16
CDK11A-217ENST00000487462 COL23A1Q86Y22 540 aaPredicted RBP14.04□□□□□ -0.16
CDK11A-217ENST00000487462 PPARGC1BQ86YN6 1023 aaKnown RBP14.04□□□□□ -0.16
CDK11A-217ENST00000487462 PCDH10Q9P2E7 1040 aa14.04□□□□□ -0.16
CDK11A-217ENST00000487462 NFAT5O94916 1531 aa14.04□□□□□ -0.16
CDK11A-217ENST00000487462 DOT1LQ8TEK3 1739 aa14.02□□□□□ -0.16
CDK11A-217ENST00000487462 IGSF1Q8N6C5 1336 aa14.02□□□□□ -0.17
CDK11A-217ENST00000487462 NMRK2Q9NPI5 230 aa14.02□□□□□ -0.17
CDK11A-217ENST00000487462 USP54Q70EL1 1684 aa14.01□□□□□ -0.17
CDK11A-217ENST00000487462 RBM46Q8TBY0 533 aaKnown RBP14.01□□□□□ -0.17
CDK11A-217ENST00000487462 C5P01031 1676 aa14□□□□□ -0.17
CDK11A-217ENST00000487462 NSD2O96028 1365 aa13.99□□□□□ -0.17
CDK11A-217ENST00000487462 IL2RBP14784 551 aa13.98□□□□□ -0.17
CDK11A-217ENST00000487462 KIAA1551Q9HCM1 1747 aa13.98□□□□□ -0.17
CDK11A-217ENST00000487462 TAF1LQ8IZX4 1826 aa13.97□□□□□ -0.17
CDK11A-217ENST00000487462 HSPA1AP0DMV8 641 aaKnown RBP13.97□□□□□ -0.17
CDK11A-217ENST00000487462 HSPA1BP0DMV9 641 aaKnown RBP13.97□□□□□ -0.17
CDK11A-217ENST00000487462 TOGARAM1Q9Y4F4 1720 aa13.97□□□□□ -0.17
CDK11A-217ENST00000487462 ERBB3P21860 1342 aa13.96□□□□□ -0.17
CDK11A-217ENST00000487462 SOX12O15370 315 aa13.96□□□□□ -0.17
CDK11A-217ENST00000487462 FSTL1Q12841 308 aa13.96□□□□□ -0.17
CDK11A-217ENST00000487462 LTN1O94822 1766 aa13.96□□□□□ -0.18
CDK11A-217ENST00000487462 KCNH5Q8NCM2 988 aa13.95□□□□□ -0.18
CDK11A-217ENST00000487462 CCNL1Q9UK58 526 aaPredicted RBP13.95□□□□□ -0.18
CDK11A-217ENST00000487462 KDM2AQ9Y2K7 1162 aa13.95□□□□□ -0.18
CDK11A-217ENST00000487462 PKD1L3Q7Z443 1732 aa13.95□□□□□ -0.18
CDK11A-217ENST00000487462 ANKRD36BQ8N2N9 1353 aa13.95□□□□□ -0.18
CDK11A-217ENST00000487462 SRPK2P78362 688 aaKnown RBP13.94□□□□□ -0.18
CDK11A-217ENST00000487462 CABP2Q9NPB3 220 aa13.94□□□□□ -0.18
CDK11A-217ENST00000487462 NLRP2Q9NX02 1062 aa13.94□□□□□ -0.18
CDK11A-217ENST00000487462 KIF13BQ9NQT8 1826 aa13.94□□□□□ -0.18
CDK11A-217ENST00000487462 PRIM1P49642 420 aaKnown RBP13.93□□□□□ -0.18
CDK11A-217ENST00000487462 ZNF579Q8NAF0 562 aaKnown RBP13.93□□□□□ -0.18
CDK11A-217ENST00000487462 CABP1Q9NZU7 370 aa13.93□□□□□ -0.18
CDK11A-217ENST00000487462 N4BP2Q86UW6 1770 aaPredicted RBP13.93□□□□□ -0.18
CDK11A-217ENST00000487462 UBR3Q6ZT12 1888 aa13.93□□□□□ -0.18
CDK11A-217ENST00000487462 CLCN6P51797 869 aa13.92□□□□□ -0.18
CDK11A-217ENST00000487462 DCAF11Q8TEB1 546 aa13.92□□□□□ -0.18
CDK11A-217ENST00000487462 SYTL4Q96C24 671 aaPredicted RBP13.92□□□□□ -0.18
CDK11A-217ENST00000487462 TNRC6CQ9HCJ0 1690 aaKnown RBP13.91□□□□□ -0.18
CDK11A-217ENST00000487462 C10orf71Q711Q0 1435 aa13.91□□□□□ -0.18
CDK11A-217ENST00000487462 BRCA1P38398 1863 aaKnown RBP13.91□□□□□ -0.18
CDK11A-217ENST00000487462 KCPQ6ZWJ8 1503 aa13.9□□□□□ -0.18
CDK11A-217ENST00000487462 AMIGO3Q86WK7 504 aa13.9□□□□□ -0.18
CDK11A-217ENST00000487462 C16orf71Q8IYS4 520 aaPredicted RBP13.9□□□□□ -0.18
CDK11A-217ENST00000487462 DDX54Q8TDD1 881 aaKnown RBP13.9□□□□□ -0.18
CDK11A-217ENST00000487462 PXDNLA1KZ92 1463 aa13.9□□□□□ -0.18
CDK11A-217ENST00000487462 C4BP0C0L5 1744 aa13.9□□□□□ -0.18
CDK11A-217ENST00000487462 KIAA1210Q9ULL0 1709 aa13.9□□□□□ -0.18
CDK11A-217ENST00000487462 TTC21BQ7Z4L5 1316 aa13.9□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms