RNA–Protein interactions for RNA: ENST00000487451.1

TFE3-203, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

TSL 3

Gene TFE3, Length 1,058 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-203ENST00000487451 COL24A1Q17RW2 1714 aa23.23■■□□□ 1.31
TFE3-203ENST00000487451 USHBP1Q8N6Y0 703 aa23.23■■□□□ 1.31
TFE3-203ENST00000487451 SYT17Q9BSW7 474 aa23.23■■□□□ 1.31
TFE3-203ENST00000487451 NBPF6Q5VWK0 638 aa23.22■■□□□ 1.31
TFE3-203ENST00000487451 AKT1S1Q96B36 256 aa23.22■■□□□ 1.31
TFE3-203ENST00000487451 NBPF4Q96M43 638 aa23.22■■□□□ 1.31
TFE3-203ENST00000487451 PRIM1P49642 420 aaKnown RBP23.21■■□□□ 1.31
TFE3-203ENST00000487451 TMF1P82094 1093 aa23.21■■□□□ 1.31
TFE3-203ENST00000487451 SYTL4Q96C24 671 aaPredicted RBP23.21■■□□□ 1.31
TFE3-203ENST00000487451 DCAF8L1A6NGE4 600 aa23.2■■□□□ 1.3
TFE3-203ENST00000487451 ZCRB1Q8TBF4 217 aaKnown RBP23.19■■□□□ 1.3
TFE3-203ENST00000487451 PNPLA7Q6ZV29 1317 aa23.18■■□□□ 1.3
TFE3-203ENST00000487451 SLC24A1O60721 1099 aa23.17■■□□□ 1.3
TFE3-203ENST00000487451 TRIM26Q12899 539 aaPredicted RBP23.17■■□□□ 1.3
TFE3-203ENST00000487451 ARXQ96QS3 562 aa23.17■■□□□ 1.3
TFE3-203ENST00000487451 TOGARAM1Q9Y4F4 1720 aa23.16■■□□□ 1.3
TFE3-203ENST00000487451 HSP90AB2PQ58FF8 381 aa23.16■■□□□ 1.3
TFE3-203ENST00000487451 SLC27A3Q5K4L6 730 aa23.16■■□□□ 1.3
TFE3-203ENST00000487451 ANKRD26Q9UPS8 1709 aa23.15■■□□□ 1.3
TFE3-203ENST00000487451 CHD4Q14839 1912 aa23.14■■□□□ 1.3
TFE3-203ENST00000487451 CARD14Q9BXL6 1004 aa23.14■■□□□ 1.29
TFE3-203ENST00000487451 SMG6Q86US8 1419 aaKnown RBP23.14■■□□□ 1.29
TFE3-203ENST00000487451 C5P01031 1676 aa23.13■■□□□ 1.29
TFE3-203ENST00000487451 NSD3Q9BZ95 1437 aa23.13■■□□□ 1.29
TFE3-203ENST00000487451 INSRP06213 1382 aa23.13■■□□□ 1.29
TFE3-203ENST00000487451 MAP3K5Q99683 1374 aa23.13■■□□□ 1.29
TFE3-203ENST00000487451 PKD1L3Q7Z443 1732 aa23.12■■□□□ 1.29
TFE3-203ENST00000487451 ITGB4P16144 1822 aa23.12■■□□□ 1.29
TFE3-203ENST00000487451 FLT4P35916 1363 aa23.12■■□□□ 1.29
TFE3-203ENST00000487451 GOLGB1Q14789 3259 aaKnown RBP23.11■■□□□ 1.29
TFE3-203ENST00000487451 TAF1LQ8IZX4 1826 aa23.11■■□□□ 1.29
TFE3-203ENST00000487451 EMILIN1Q9Y6C2 1016 aa23.11■■□□□ 1.29
TFE3-203ENST00000487451 TFCP2L1Q9NZI6 479 aa23.1■■□□□ 1.29
TFE3-203ENST00000487451 RAPGEF4Q8WZA2 1011 aa23.09■■□□□ 1.29
TFE3-203ENST00000487451 CCNL1Q9UK58 526 aaPredicted RBP23.09■■□□□ 1.29
TFE3-203ENST00000487451 MAP2P11137 1827 aaKnown RBP23.08■■□□□ 1.28
TFE3-203ENST00000487451 CGNL1Q0VF96 1302 aa23.08■■□□□ 1.28
TFE3-203ENST00000487451 TATP17735 454 aaPredicted RBP23.07■■□□□ 1.28
TFE3-203ENST00000487451 KLHL34Q8N239 644 aa23.07■■□□□ 1.28
TFE3-203ENST00000487451 SLC16A10Q8TF71 515 aa23.07■■□□□ 1.28
TFE3-203ENST00000487451 KIF24Q5T7B8 1368 aa23.06■■□□□ 1.28
TFE3-203ENST00000487451 ZNF784Q8NCA9 323 aaPredicted RBP23.06■■□□□ 1.28
TFE3-203ENST00000487451 NCAPD2Q15021 1401 aa23.06■■□□□ 1.28
TFE3-203ENST00000487451 PCDH11XQ9BZA7 1347 aa23.06■■□□□ 1.28
TFE3-203ENST00000487451 PCDH11YQ9BZA8 1340 aa23.06■■□□□ 1.28
TFE3-203ENST00000487451 CYP27B1O15528 508 aa23.05■■□□□ 1.28
TFE3-203ENST00000487451 CDCA8Q53HL2 280 aa23.05■■□□□ 1.28
TFE3-203ENST00000487451 COL23A1Q86Y22 540 aaPredicted RBP23.04■■□□□ 1.28
TFE3-203ENST00000487451 NLGN2Q8NFZ4 835 aa23.04■■□□□ 1.28
TFE3-203ENST00000487451 POLD1P28340 1107 aa23.03■■□□□ 1.28
TFE3-203ENST00000487451 C4BP0C0L5 1744 aa23.02■■□□□ 1.28
TFE3-203ENST00000487451 PALLDQ8WX93 1383 aa23.01■■□□□ 1.27
TFE3-203ENST00000487451 PPM1GO15355 546 aaPredicted RBP23■■□□□ 1.27
TFE3-203ENST00000487451 MSL1Q68DK7 614 aa23■■□□□ 1.27
TFE3-203ENST00000487451 MPRIPQ6WCQ1 1025 aa23■■□□□ 1.27
TFE3-203ENST00000487451 UBR3Q6ZT12 1888 aa22.99■■□□□ 1.27
TFE3-203ENST00000487451 MSH5O43196 834 aa22.99■■□□□ 1.27
TFE3-203ENST00000487451 GPR162Q16538 588 aa22.98■■□□□ 1.27
TFE3-203ENST00000487451 AMIGO3Q86WK7 504 aa22.98■■□□□ 1.27
TFE3-203ENST00000487451 SMIM5Q71RC9 77 aa22.96■■□□□ 1.27
TFE3-203ENST00000487451 PELP1Q8IZL8 1130 aaKnown RBP22.96■■□□□ 1.27
TFE3-203ENST00000487451 WASHC2AQ641Q2 1341 aa22.96■■□□□ 1.27
TFE3-203ENST00000487451 EYA1Q99502 592 aa22.95■■□□□ 1.26
TFE3-203ENST00000487451 PIGBQ92521 554 aa22.94■■□□□ 1.26
TFE3-203ENST00000487451 POLR3GLQ9BT43 218 aa22.94■■□□□ 1.26
TFE3-203ENST00000487451 POLKQ9UBT6 870 aa22.94■■□□□ 1.26
TFE3-203ENST00000487451 PCGF6Q9BYE7 350 aa22.93■■□□□ 1.26
TFE3-203ENST00000487451 TIMELESSQ9UNS1 1208 aa22.93■■□□□ 1.26
TFE3-203ENST00000487451 YBX3P16989 372 aaKnown RBP eCLIP22.92■■□□□ 1.268e-10■■■■■ 38.6
TFE3-203ENST00000487451 NKX1-1Q15270 411 aaPredicted RBP22.92■■□□□ 1.26
TFE3-203ENST00000487451 TNNT2P45379 298 aaPredicted RBP22.91■■□□□ 1.26
TFE3-203ENST00000487451 EIF4A2Q14240 407 aaKnown RBP22.89■■□□□ 1.25
TFE3-203ENST00000487451 SPG7Q9UQ90 795 aa22.89■■□□□ 1.25
TFE3-203ENST00000487451 LINC00116Q8NCU8 138 aa22.88■■□□□ 1.25
TFE3-203ENST00000487451 CLSPNQ9HAW4 1339 aa22.87■■□□□ 1.25
TFE3-203ENST00000487451 PHF14O94880 888 aa22.87■■□□□ 1.25
TFE3-203ENST00000487451 PHKG2P15735 406 aa22.87■■□□□ 1.25
TFE3-203ENST00000487451 SMARCC1Q92922 1105 aaPredicted RBP22.87■■□□□ 1.25
TFE3-203ENST00000487451 AK7Q96M32 723 aa22.86■■□□□ 1.25
TFE3-203ENST00000487451 ASAP1Q9ULH1 1129 aa22.86■■□□□ 1.25
TFE3-203ENST00000487451 LOC102724428A0A0B4J2F2 783 aa22.85■■□□□ 1.25
TFE3-203ENST00000487451 HSPA5P11021 654 aaKnown RBP22.85■■□□□ 1.25
TFE3-203ENST00000487451 SIK1P57059 783 aa22.85■■□□□ 1.25
TFE3-203ENST00000487451 ITPK1Q13572 414 aa22.85■■□□□ 1.25
TFE3-203ENST00000487451 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.84■■□□□ 1.25
TFE3-203ENST00000487451 TMOD3Q9NYL9 352 aa22.84■■□□□ 1.25
TFE3-203ENST00000487451 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.83■■□□□ 1.25
TFE3-203ENST00000487451 IFNL2Q8IZJ0 200 aa22.83■■□□□ 1.25
TFE3-203ENST00000487451 FLAD1Q8NFF5 587 aa22.83■■□□□ 1.25
TFE3-203ENST00000487451 IGSF1Q8N6C5 1336 aa22.82■■□□□ 1.24
TFE3-203ENST00000487451 PANK3Q9H999 370 aa22.82■■□□□ 1.24
TFE3-203ENST00000487451 COL5A3P25940 1745 aaPredicted RBP22.82■■□□□ 1.24
TFE3-203ENST00000487451 C1QTNF8P60827 252 aa22.81■■□□□ 1.24
TFE3-203ENST00000487451 KDRP35968 1356 aa22.8■■□□□ 1.24
TFE3-203ENST00000487451 ATG3Q9NT62 314 aa22.8■■□□□ 1.24
TFE3-203ENST00000487451 CD2APQ9Y5K6 639 aa22.8■■□□□ 1.24
TFE3-203ENST00000487451 EIF4G2P78344 907 aaKnown RBP eCLIP22.79■■□□□ 1.24
TFE3-203ENST00000487451 KDM6AO15550 1401 aaPredicted RBP22.79■■□□□ 1.24
TFE3-203ENST00000487451 ZNF831Q5JPB2 1677 aa22.78■■□□□ 1.24
TFE3-203ENST00000487451 GNPATO15228 680 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms