RNA–Protein interactions for RNA: ENST00000487194.1

VAMP3-203, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 4

Gene VAMP3, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-203ENST00000487194 USHBP1Q8N6Y0 703 aa7.94□□□□□ -1.14
VAMP3-203ENST00000487194 PRDM11Q9NQV5 511 aa7.94□□□□□ -1.14
VAMP3-203ENST00000487194 BABAM1Q9NWV8 329 aa7.94□□□□□ -1.14
VAMP3-203ENST00000487194 CAMTA1Q9Y6Y1 1673 aa7.94□□□□□ -1.14
VAMP3-203ENST00000487194 MAP3K5Q99683 1374 aa7.94□□□□□ -1.14
VAMP3-203ENST00000487194 FAM83GA6ND36 823 aa7.93□□□□□ -1.14
VAMP3-203ENST00000487194 CHL1O00533 1208 aa7.93□□□□□ -1.14
VAMP3-203ENST00000487194 MS4A1P11836 297 aa7.93□□□□□ -1.14
VAMP3-203ENST00000487194 PDE3AQ14432 1141 aa7.93□□□□□ -1.14
VAMP3-203ENST00000487194 ALDH1L2Q3SY69 923 aa7.93□□□□□ -1.14
VAMP3-203ENST00000487194 AKAP4Q5JQC9 854 aa7.93□□□□□ -1.14
VAMP3-203ENST00000487194 MCM10Q7L590 875 aa7.93□□□□□ -1.14
VAMP3-203ENST00000487194 RAPGEF4Q8WZA2 1011 aa7.93□□□□□ -1.14
VAMP3-203ENST00000487194 THUMPD2Q9BTF0 503 aaKnown RBP7.93□□□□□ -1.14
VAMP3-203ENST00000487194 MBIPQ9NS73 344 aa7.93□□□□□ -1.14
VAMP3-203ENST00000487194 NLRP2Q9NX02 1062 aa7.93□□□□□ -1.14
VAMP3-203ENST00000487194 LMO7Q8WWI1 1683 aa7.92□□□□□ -1.14
VAMP3-203ENST00000487194 PLIN1O60240 522 aa7.92□□□□□ -1.14
VAMP3-203ENST00000487194 BCAR3O75815 825 aa7.92□□□□□ -1.14
VAMP3-203ENST00000487194 TATP17735 454 aaPredicted RBP7.92□□□□□ -1.14
VAMP3-203ENST00000487194 DCTN1Q14203 1278 aa7.92□□□□□ -1.14
VAMP3-203ENST00000487194 CHRNA2Q15822 529 aa7.92□□□□□ -1.14
VAMP3-203ENST00000487194 C1orf141Q5JVX7 400 aa7.92□□□□□ -1.14
VAMP3-203ENST00000487194 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.92□□□□□ -1.14
VAMP3-203ENST00000487194 CRB1P82279 1406 aa7.92□□□□□ -1.14
VAMP3-203ENST00000487194 ABCA3Q99758 1704 aa7.92□□□□□ -1.14
VAMP3-203ENST00000487194 IPO8O15397 1037 aaKnown RBP7.91□□□□□ -1.14
VAMP3-203ENST00000487194 BRPF1P55201 1214 aaPredicted RBP7.91□□□□□ -1.14
VAMP3-203ENST00000487194 ZNF530Q6P9A1 599 aaPredicted RBP7.91□□□□□ -1.14
VAMP3-203ENST00000487194 SMC4Q9NTJ3 1288 aa7.91□□□□□ -1.14
VAMP3-203ENST00000487194 SPG7Q9UQ90 795 aa7.91□□□□□ -1.14
VAMP3-203ENST00000487194 SOS1Q07889 1333 aaPredicted RBP7.91□□□□□ -1.14
VAMP3-203ENST00000487194 WDR17Q8IZU2 1322 aa7.91□□□□□ -1.14
VAMP3-203ENST00000487194 KIF16BQ96L93 1317 aa7.91□□□□□ -1.14
VAMP3-203ENST00000487194 OVOS2A0A0G2JMS6 1433 aa7.91□□□□□ -1.14
VAMP3-203ENST00000487194 COL22A1Q8NFW1 1626 aaPredicted RBP7.91□□□□□ -1.14
VAMP3-203ENST00000487194 RGPD2P0DJD1 1756 aa7.91□□□□□ -1.14
VAMP3-203ENST00000487194 RGPD5Q99666 1765 aa7.91□□□□□ -1.14
VAMP3-203ENST00000487194 COL5A2P05997 1499 aaPredicted RBP7.9□□□□□ -1.14
VAMP3-203ENST00000487194 CEMIPQ8WUJ3 1361 aa7.9□□□□□ -1.14
VAMP3-203ENST00000487194 VAMP4O75379 141 aa7.9□□□□□ -1.14
VAMP3-203ENST00000487194 EVA1CP58658 441 aa7.9□□□□□ -1.14
VAMP3-203ENST00000487194 AAMPQ13685 434 aa7.9□□□□□ -1.14
VAMP3-203ENST00000487194 TAF7Q15545 349 aaPredicted RBP7.9□□□□□ -1.14
VAMP3-203ENST00000487194 TWISTNBQ3B726 338 aaPredicted RBP7.9□□□□□ -1.14
VAMP3-203ENST00000487194 ZKSCAN2Q63HK3 967 aa7.9□□□□□ -1.14
VAMP3-203ENST00000487194 TOM1L2Q6ZVM7 507 aa7.9□□□□□ -1.14
VAMP3-203ENST00000487194 IL17REQ8NFR9 667 aa7.9□□□□□ -1.14
VAMP3-203ENST00000487194 EXOC6Q8TAG9 804 aa7.9□□□□□ -1.14
VAMP3-203ENST00000487194 FRAT1Q92837 279 aaPredicted RBP7.9□□□□□ -1.14
VAMP3-203ENST00000487194 CCDC136Q96JN2 1154 aa7.9□□□□□ -1.14
VAMP3-203ENST00000487194 CRBNQ96SW2 442 aa7.9□□□□□ -1.14
VAMP3-203ENST00000487194 CHMP4AQ9BY43 222 aa7.9□□□□□ -1.14
VAMP3-203ENST00000487194 TSPYL4Q9UJ04 414 aa7.9□□□□□ -1.14
VAMP3-203ENST00000487194 PHLPP1O60346 1717 aa7.89□□□□□ -1.15
VAMP3-203ENST00000487194 LRRC37A3O60309 1634 aa7.89□□□□□ -1.15
VAMP3-203ENST00000487194 UBAP1LF5GYI3 381 aa7.89□□□□□ -1.15
VAMP3-203ENST00000487194 SSH1Q8WYL5 1049 aa7.89□□□□□ -1.15
VAMP3-203ENST00000487194 CARD10Q9BWT7 1032 aa7.89□□□□□ -1.15
VAMP3-203ENST00000487194 COL16A1Q07092 1604 aaPredicted RBP7.89□□□□□ -1.15
VAMP3-203ENST00000487194 HSP90AB1P08238 724 aaKnown RBP7.88□□□□□ -1.15
VAMP3-203ENST00000487194 PIP4K2BP78356 416 aa7.88□□□□□ -1.15
VAMP3-203ENST00000487194 TEFQ10587 303 aa7.88□□□□□ -1.15
VAMP3-203ENST00000487194 C20orf194Q5TEA3 1177 aa7.88□□□□□ -1.15
VAMP3-203ENST00000487194 B4GALNT3Q6L9W6 998 aa7.88□□□□□ -1.15
VAMP3-203ENST00000487194 FTSJ3Q8IY81 847 aaKnown RBP7.88□□□□□ -1.15
VAMP3-203ENST00000487194 IFNL2Q8IZJ0 200 aa7.88□□□□□ -1.15
VAMP3-203ENST00000487194 C8orf58Q8NAV2 365 aa7.88□□□□□ -1.15
VAMP3-203ENST00000487194 ARHGAP45Q92619 1136 aa7.88□□□□□ -1.15
VAMP3-203ENST00000487194 BCL2L13Q9BXK5 485 aa7.88□□□□□ -1.15
VAMP3-203ENST00000487194 COL14A1Q05707 1796 aaKnown RBP7.88□□□□□ -1.15
VAMP3-203ENST00000487194 ELL2O00472 640 aaPredicted RBP7.87□□□□□ -1.15
VAMP3-203ENST00000487194 RNMTO43148 476 aaKnown RBP7.87□□□□□ -1.15
VAMP3-203ENST00000487194 PHKG2P15735 406 aa7.87□□□□□ -1.15
VAMP3-203ENST00000487194 ATF7IPQ6VMQ6 1270 aa7.87□□□□□ -1.15
VAMP3-203ENST00000487194 MPRIPQ6WCQ1 1025 aa7.87□□□□□ -1.15
VAMP3-203ENST00000487194 DZIP1LQ8IYY4 767 aaKnown RBP7.87□□□□□ -1.15
VAMP3-203ENST00000487194 MRPL50Q8N5N7 158 aaKnown RBP7.87□□□□□ -1.15
VAMP3-203ENST00000487194 TSPYL6Q8N831 410 aa7.87□□□□□ -1.15
VAMP3-203ENST00000487194 BTG4Q9NY30 223 aa7.87□□□□□ -1.15
VAMP3-203ENST00000487194 MEGF6O75095 1541 aa7.87□□□□□ -1.15
VAMP3-203ENST00000487194 HOXB7P09629 217 aa7.86□□□□□ -1.15
VAMP3-203ENST00000487194 IL2RBP14784 551 aa7.86□□□□□ -1.15
VAMP3-203ENST00000487194 LARP1Q6PKG0 1096 aaKnown RBP7.86□□□□□ -1.15
VAMP3-203ENST00000487194 ZCRB1Q8TBF4 217 aaKnown RBP7.86□□□□□ -1.15
VAMP3-203ENST00000487194 DCAF5Q96JK2 942 aa7.86□□□□□ -1.15
VAMP3-203ENST00000487194 API5Q9BZZ5 524 aaKnown RBP7.86□□□□□ -1.15
VAMP3-203ENST00000487194 CHMP4BQ9H444 224 aaKnown RBP7.86□□□□□ -1.15
VAMP3-203ENST00000487194 LGR6Q9HBX8 967 aa7.86□□□□□ -1.15
VAMP3-203ENST00000487194 STRN4Q9NRL3 753 aa7.86□□□□□ -1.15
VAMP3-203ENST00000487194 MIS18AQ9NYP9 233 aa7.86□□□□□ -1.15
VAMP3-203ENST00000487194 NOB1Q9ULX3 412 aaKnown RBP7.86□□□□□ -1.15
VAMP3-203ENST00000487194 PKD1L3Q7Z443 1732 aa7.86□□□□□ -1.15
VAMP3-203ENST00000487194 PARP4Q9UKK3 1724 aaKnown RBP7.86□□□□□ -1.15
VAMP3-203ENST00000487194 PCDH11XQ9BZA7 1347 aa7.85□□□□□ -1.15
VAMP3-203ENST00000487194 PCDH11YQ9BZA8 1340 aa7.85□□□□□ -1.15
VAMP3-203ENST00000487194 BTBD11A6QL63 1104 aa7.85□□□□□ -1.15
VAMP3-203ENST00000487194 TRIM27P14373 513 aa7.85□□□□□ -1.15
VAMP3-203ENST00000487194 MVPQ14764 893 aaKnown RBP7.85□□□□□ -1.15
VAMP3-203ENST00000487194 CCDC30Q5VVM6 783 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms