RNA–Protein interactions for RNA: ENST00000487121.1

MCFD2-216, Transcript of multiple coagulation factor deficiency 2, humanhuman

TSL 3

Gene MCFD2, Length 627 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCFD2-216ENST00000487121 TATP17735 454 aaPredicted RBP20.4■□□□□ 0.86
MCFD2-216ENST00000487121 BCL9O00512 1426 aa20.39■□□□□ 0.85
MCFD2-216ENST00000487121 PSDA5PKW4 1024 aaPredicted RBP20.38■□□□□ 0.85
MCFD2-216ENST00000487121 DDX10Q13206 875 aaKnown RBP20.38■□□□□ 0.85
MCFD2-216ENST00000487121 RGPD2P0DJD1 1756 aa20.38■□□□□ 0.85
MCFD2-216ENST00000487121 TNS1Q9HBL0 1735 aaKnown RBP20.38■□□□□ 0.85
MCFD2-216ENST00000487121 PLSCR1O15162 318 aa20.36■□□□□ 0.85
MCFD2-216ENST00000487121 R3HDM1Q15032 1099 aaKnown RBP20.34■□□□□ 0.85
MCFD2-216ENST00000487121 PROM2Q8N271 834 aa20.34■□□□□ 0.85
MCFD2-216ENST00000487121 PRIM1P49642 420 aaKnown RBP20.33■□□□□ 0.85
MCFD2-216ENST00000487121 MTHFSP49914 203 aa20.33■□□□□ 0.85
MCFD2-216ENST00000487121 SYTL4Q96C24 671 aaPredicted RBP20.32■□□□□ 0.84
MCFD2-216ENST00000487121 PARD3Q8TEW0 1356 aa20.32■□□□□ 0.84
MCFD2-216ENST00000487121 CYP27B1O15528 508 aa20.31■□□□□ 0.84
MCFD2-216ENST00000487121 PLEKHG2Q9H7P9 1386 aa20.31■□□□□ 0.84
MCFD2-216ENST00000487121 NCAPD2Q15021 1401 aa20.3■□□□□ 0.84
MCFD2-216ENST00000487121 RALBP1Q15311 655 aa20.3■□□□□ 0.84
MCFD2-216ENST00000487121 TXNRD1Q16881 649 aa20.29■□□□□ 0.84
MCFD2-216ENST00000487121 SBF2Q86WG5 1849 aa20.29■□□□□ 0.84
MCFD2-216ENST00000487121 IGSF1Q8N6C5 1336 aa20.28■□□□□ 0.84
MCFD2-216ENST00000487121 IL13P35225 146 aa20.28■□□□□ 0.84
MCFD2-216ENST00000487121 NBPF14Q5TI25 921 aa20.28■□□□□ 0.84
MCFD2-216ENST00000487121 SPG7Q9UQ90 795 aa20.28■□□□□ 0.84
MCFD2-216ENST00000487121 PCDH11XQ9BZA7 1347 aa20.27■□□□□ 0.84
MCFD2-216ENST00000487121 PCDH11YQ9BZA8 1340 aa20.27■□□□□ 0.84
MCFD2-216ENST00000487121 AEBP1Q8IUX7 1158 aa20.27■□□□□ 0.84
MCFD2-216ENST00000487121 CFAP53Q96M91 514 aa20.27■□□□□ 0.84
MCFD2-216ENST00000487121 PPP2R1AP30153 589 aa20.25■□□□□ 0.83
MCFD2-216ENST00000487121 SULT6B1Q6IMI4 303 aa20.25■□□□□ 0.83
MCFD2-216ENST00000487121 ANO8Q9HCE9 1232 aaPredicted RBP20.24■□□□□ 0.83
MCFD2-216ENST00000487121 DIAPH1O60610 1272 aaKnown RBP20.23■□□□□ 0.83
MCFD2-216ENST00000487121 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.23■□□□□ 0.83
MCFD2-216ENST00000487121 KCNQ4P56696 695 aa20.22■□□□□ 0.83
MCFD2-216ENST00000487121 MPRIPQ6WCQ1 1025 aa20.22■□□□□ 0.83
MCFD2-216ENST00000487121 NHSQ6T4R5 1651 aa20.22■□□□□ 0.83
MCFD2-216ENST00000487121 SHANK3Q9BYB0 1731 aa20.22■□□□□ 0.83
MCFD2-216ENST00000487121 PHKG2P15735 406 aa20.21■□□□□ 0.83
MCFD2-216ENST00000487121 NKX1-1Q15270 411 aaPredicted RBP20.21■□□□□ 0.83
MCFD2-216ENST00000487121 IFNL2Q8IZJ0 200 aa20.21■□□□□ 0.83
MCFD2-216ENST00000487121 LRRC4BQ9NT99 713 aa20.21■□□□□ 0.83
MCFD2-216ENST00000487121 COL3A1P02461 1466 aaPredicted RBP20.21■□□□□ 0.83
MCFD2-216ENST00000487121 HMOX1P09601 288 aa20.2■□□□□ 0.82
MCFD2-216ENST00000487121 PLEKHO1Q53GL0 409 aaPredicted RBP20.2■□□□□ 0.82
MCFD2-216ENST00000487121 KDRP35968 1356 aa20.2■□□□□ 0.82
MCFD2-216ENST00000487121 PKD1L3Q7Z443 1732 aa20.19■□□□□ 0.82
MCFD2-216ENST00000487121 NUDCQ9Y266 331 aa20.19■□□□□ 0.82
MCFD2-216ENST00000487121 MYBBP1AQ9BQG0 1328 aaKnown RBP20.19■□□□□ 0.82
MCFD2-216ENST00000487121 RREB1Q92766 1687 aa20.19■□□□□ 0.82
MCFD2-216ENST00000487121 NUP188Q5SRE5 1749 aa20.18■□□□□ 0.82
MCFD2-216ENST00000487121 ZNF530Q6P9A1 599 aaPredicted RBP20.17■□□□□ 0.82
MCFD2-216ENST00000487121 PIGBQ92521 554 aa20.17■□□□□ 0.82
MCFD2-216ENST00000487121 PDGFDQ9GZP0 370 aaPredicted RBP20.17■□□□□ 0.82
MCFD2-216ENST00000487121 PRKRIP1Q9H875 184 aaPredicted RBP20.17■□□□□ 0.82
MCFD2-216ENST00000487121 STK32BQ9NY57 414 aa20.17■□□□□ 0.82
MCFD2-216ENST00000487121 KAT6BQ8WYB5 2073 aa20.16■□□□□ 0.82
MCFD2-216ENST00000487121 U2SURPO15042 1029 aaKnown RBP20.16■□□□□ 0.82
MCFD2-216ENST00000487121 SLC15A2Q16348 729 aa20.16■□□□□ 0.82
MCFD2-216ENST00000487121 AMOTQ4VCS5 1084 aa20.16■□□□□ 0.82
MCFD2-216ENST00000487121 BTAF1O14981 1849 aa20.16■□□□□ 0.82
MCFD2-216ENST00000487121 DOT1LQ8TEK3 1739 aa20.14■□□□□ 0.81
MCFD2-216ENST00000487121 SLC27A3Q5K4L6 730 aa20.14■□□□□ 0.81
MCFD2-216ENST00000487121 ZNF827Q17R98 1081 aa20.13■□□□□ 0.81
MCFD2-216ENST00000487121 CCNL1Q9UK58 526 aaPredicted RBP20.13■□□□□ 0.81
MCFD2-216ENST00000487121 RGPD3A6NKT7 1758 aaPredicted RBP20.13■□□□□ 0.81
MCFD2-216ENST00000487121 RGPD4Q7Z3J3 1758 aa20.13■□□□□ 0.81
MCFD2-216ENST00000487121 C1orf141Q5JVX7 400 aa20.12■□□□□ 0.81
MCFD2-216ENST00000487121 TMOD3Q9NYL9 352 aa20.12■□□□□ 0.81
MCFD2-216ENST00000487121 DCAF5Q96JK2 942 aa20.11■□□□□ 0.81
MCFD2-216ENST00000487121 ASAP1Q9ULH1 1129 aa20.11■□□□□ 0.81
MCFD2-216ENST00000487121 ANP32CO43423 234 aa20.1■□□□□ 0.81
MCFD2-216ENST00000487121 HSP90AB1P08238 724 aaKnown RBP20.1■□□□□ 0.81
MCFD2-216ENST00000487121 AKT1S1Q96B36 256 aa20.1■□□□□ 0.81
MCFD2-216ENST00000487121 PALLDQ8WX93 1383 aa20.09■□□□□ 0.81
MCFD2-216ENST00000487121 MTHFSDQ2M296 383 aaKnown RBP20.09■□□□□ 0.81
MCFD2-216ENST00000487121 SMARCC1Q92922 1105 aaPredicted RBP20.09■□□□□ 0.81
MCFD2-216ENST00000487121 ERVV-2B6SEH9 535 aa20.08■□□□□ 0.81
MCFD2-216ENST00000487121 ZBTB7AO95365 584 aa20.08■□□□□ 0.81
MCFD2-216ENST00000487121 FCHSD2O94868 740 aa20.07■□□□□ 0.8
MCFD2-216ENST00000487121 CABP4P57796 275 aa20.07■□□□□ 0.8
MCFD2-216ENST00000487121 PNNQ9H307 717 aaKnown RBP20.07■□□□□ 0.8
MCFD2-216ENST00000487121 ATG3Q9NT62 314 aa20.07■□□□□ 0.8
MCFD2-216ENST00000487121 TOGARAM1Q9Y4F4 1720 aa20.07■□□□□ 0.8
MCFD2-216ENST00000487121 SRCAPQ6ZRS2 3230 aa20.06■□□□□ 0.8
MCFD2-216ENST00000487121 KDM6AO15550 1401 aaPredicted RBP20.06■□□□□ 0.8
MCFD2-216ENST00000487121 AKAP4Q5JQC9 854 aa20.06■□□□□ 0.8
MCFD2-216ENST00000487121 LGR6Q9HBX8 967 aa20.06■□□□□ 0.8
MCFD2-216ENST00000487121 SPON1Q9HCB6 807 aa20.06■□□□□ 0.8
MCFD2-216ENST00000487121 TFCP2L1Q9NZI6 479 aa20.06■□□□□ 0.8
MCFD2-216ENST00000487121 ATF5Q9Y2D1 282 aaPredicted RBP20.06■□□□□ 0.8
MCFD2-216ENST00000487121 U2AF1L5P0DN76 240 aaPredicted RBP20.05■□□□□ 0.8
MCFD2-216ENST00000487121 U2AF1Q01081 240 aaKnown RBP eCLIP20.05■□□□□ 0.8
MCFD2-216ENST00000487121 NFATC2IPQ8NCF5 419 aa20.05■□□□□ 0.8
MCFD2-216ENST00000487121 LOC102724428A0A0B4J2F2 783 aa20.03■□□□□ 0.8
MCFD2-216ENST00000487121 NEFMP07197 916 aa20.03■□□□□ 0.8
MCFD2-216ENST00000487121 PRKAR2BP31323 418 aa20.03■□□□□ 0.8
MCFD2-216ENST00000487121 SIK1P57059 783 aa20.03■□□□□ 0.8
MCFD2-216ENST00000487121 PHACTR3Q96KR7 559 aa20.03■□□□□ 0.8
MCFD2-216ENST00000487121 RSPH6AQ9H0K4 717 aa20.03■□□□□ 0.8
MCFD2-216ENST00000487121 GAS2L2Q8NHY3 880 aa20.02■□□□□ 0.8
MCFD2-216ENST00000487121 RBM42Q9BTD8 480 aaKnown RBP20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms