RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 PRICKLE2Q7Z3G6 844 aa8.79□□□□□ -1
SNRNP40-205ENST00000486941 CDC14CA4D256 554 aa8.78□□□□□ -1
SNRNP40-205ENST00000486941 NR1H3Q13133 447 aa8.78□□□□□ -1
SNRNP40-205ENST00000486941 GAS6Q14393 721 aa8.78□□□□□ -1
SNRNP40-205ENST00000486941 A0A1W2PRU2 124 aa8.77□□□□□ -1.01
SNRNP40-205ENST00000486941 SLURP2P0DP57 97 aa8.77□□□□□ -1.01
SNRNP40-205ENST00000486941 SV2AQ7L0J3 742 aa8.77□□□□□ -1.01
SNRNP40-205ENST00000486941 LYSMD3Q7Z3D4 306 aa8.77□□□□□ -1.01
SNRNP40-205ENST00000486941 BANK1Q8NDB2 785 aa8.77□□□□□ -1.01
SNRNP40-205ENST00000486941 ADAMTS8Q9UP79 889 aa8.77□□□□□ -1.01
SNRNP40-205ENST00000486941 ATP5J2-PTCD1G3V325 749 aa8.76□□□□□ -1.01
SNRNP40-205ENST00000486941 ARHGEF15O94989 841 aa8.76□□□□□ -1.01
SNRNP40-205ENST00000486941 OSBPL3Q9H4L5 887 aa8.76□□□□□ -1.01
SNRNP40-205ENST00000486941 TRAK2O60296 914 aa8.75□□□□□ -1.01
SNRNP40-205ENST00000486941 KCNMA1Q12791 1236 aa8.75□□□□□ -1.01
SNRNP40-205ENST00000486941 TSGA10IPQ3SY00 556 aa8.75□□□□□ -1.01
SNRNP40-205ENST00000486941 MEN1O00255 615 aa8.74□□□□□ -1.01
SNRNP40-205ENST00000486941 DBN1Q16643 649 aa8.74□□□□□ -1.01
SNRNP40-205ENST00000486941 CC2D2BQ6DHV5 1058 aa8.74□□□□□ -1.01
SNRNP40-205ENST00000486941 CDCA7Q9BWT1 371 aaPredicted RBP8.74□□□□□ -1.01
SNRNP40-205ENST00000486941 GRIP2Q9C0E4 1043 aa8.74□□□□□ -1.01
SNRNP40-205ENST00000486941 SOCS7O14512 581 aa8.73□□□□□ -1.01
SNRNP40-205ENST00000486941 POU4F2Q12837 409 aa8.73□□□□□ -1.01
SNRNP40-205ENST00000486941 LYPD4Q6UWN0 246 aa8.72□□□□□ -1.01
SNRNP40-205ENST00000486941 ZNF837Q96EG3 531 aaPredicted RBP8.72□□□□□ -1.01
SNRNP40-205ENST00000486941 CCDC85AQ96PX6 553 aaPredicted RBP8.72□□□□□ -1.01
SNRNP40-205ENST00000486941 TPRNQ4KMQ1 711 aa8.71□□□□□ -1.02
SNRNP40-205ENST00000486941 PCDHB11Q9Y5F2 797 aa8.71□□□□□ -1.02
SNRNP40-205ENST00000486941 NDUFB9Q9Y6M9 179 aa8.71□□□□□ -1.02
SNRNP40-205ENST00000486941 GPR25O00155 361 aa8.7□□□□□ -1.02
SNRNP40-205ENST00000486941 ADAMTS2O95450 1211 aa8.7□□□□□ -1.02
SNRNP40-205ENST00000486941 THBS1P07996 1170 aa8.7□□□□□ -1.02
SNRNP40-205ENST00000486941 GPC1P35052 558 aa8.7□□□□□ -1.02
SNRNP40-205ENST00000486941 CLN3Q13286 438 aa8.7□□□□□ -1.02
SNRNP40-205ENST00000486941 IRF5Q13568 498 aa8.7□□□□□ -1.02
SNRNP40-205ENST00000486941 KCTD17Q8N5Z5 321 aa8.7□□□□□ -1.02
SNRNP40-205ENST00000486941 CEP126Q9P2H0 1117 aa8.7□□□□□ -1.02
SNRNP40-205ENST00000486941 TBC1D2BQ9UPU7 963 aa8.7□□□□□ -1.02
SNRNP40-205ENST00000486941 PHTF2Q8N3S3 785 aa8.69□□□□□ -1.02
SNRNP40-205ENST00000486941 ARHGEF10LQ9HCE6 1279 aa8.69□□□□□ -1.02
SNRNP40-205ENST00000486941 RAB6BQ9NRW1 208 aa8.69□□□□□ -1.02
SNRNP40-205ENST00000486941 HRH3Q9Y5N1 445 aa8.69□□□□□ -1.02
SNRNP40-205ENST00000486941 STAU1O95793 577 aaKnown RBP8.68□□□□□ -1.02
SNRNP40-205ENST00000486941 IL2RAP01589 272 aa8.68□□□□□ -1.02
SNRNP40-205ENST00000486941 RASSF7Q02833 373 aa8.68□□□□□ -1.02
SNRNP40-205ENST00000486941 RNF20Q5VTR2 975 aa8.68□□□□□ -1.02
SNRNP40-205ENST00000486941 NBPF10Q6P3W6 841 aaKnown RBP8.68□□□□□ -1.02
SNRNP40-205ENST00000486941 TRIM22Q8IYM9 498 aa8.68□□□□□ -1.02
SNRNP40-205ENST00000486941 SVOPQ8N4V2 548 aa8.68□□□□□ -1.02
SNRNP40-205ENST00000486941 NBPF15Q8N660 670 aa8.68□□□□□ -1.02
SNRNP40-205ENST00000486941 MCCD1P59942 119 aaPredicted RBP8.67□□□□□ -1.02
SNRNP40-205ENST00000486941 SPATA31C2B4DYI2 1134 aa8.66□□□□□ -1.02
SNRNP40-205ENST00000486941 SRSF11Q05519 484 aaKnown RBP8.66□□□□□ -1.02
SNRNP40-205ENST00000486941 CCDC125Q86Z20 511 aa8.66□□□□□ -1.02
SNRNP40-205ENST00000486941 DYRK1BQ9Y463 629 aa8.66□□□□□ -1.02
SNRNP40-205ENST00000486941 CELA2BP08218 269 aaPredicted RBP8.65□□□□□ -1.02
SNRNP40-205ENST00000486941 CYP2U1Q7Z449 544 aa8.65□□□□□ -1.02
SNRNP40-205ENST00000486941 CENPCQ03188 943 aa8.64□□□□□ -1.03
SNRNP40-205ENST00000486941 SLC27A3Q5K4L6 730 aa8.64□□□□□ -1.03
SNRNP40-205ENST00000486941 RIPOR1Q6ZS17 1223 aa8.64□□□□□ -1.03
SNRNP40-205ENST00000486941 GTPBP3Q969Y2 492 aaKnown RBP8.64□□□□□ -1.03
SNRNP40-205ENST00000486941 NLRP3Q96P20 1036 aa8.64□□□□□ -1.03
SNRNP40-205ENST00000486941 GAS2L1Q99501 681 aaPredicted RBP8.64□□□□□ -1.03
SNRNP40-205ENST00000486941 GDF11O95390 407 aa8.63□□□□□ -1.03
SNRNP40-205ENST00000486941 TMEM151AQ8N4L1 468 aa8.63□□□□□ -1.03
SNRNP40-205ENST00000486941 CNKSR1Q969H4 720 aa8.63□□□□□ -1.03
SNRNP40-205ENST00000486941 FHDC1Q9C0D6 1143 aaPredicted RBP8.63□□□□□ -1.03
SNRNP40-205ENST00000486941 UBAP2LQ14157 1087 aaKnown RBP8.62□□□□□ -1.03
SNRNP40-205ENST00000486941 XAGE2Q96GT9 111 aa8.62□□□□□ -1.03
SNRNP40-205ENST00000486941 ESYT1Q9BSJ8 1104 aa8.62□□□□□ -1.03
SNRNP40-205ENST00000486941 CHIC2Q9UKJ5 165 aa8.62□□□□□ -1.03
SNRNP40-205ENST00000486941 IGF1RP08069 1367 aa8.61□□□□□ -1.03
SNRNP40-205ENST00000486941 LOC100996750A0A140TA64 210 aa8.61□□□□□ -1.03
SNRNP40-205ENST00000486941 WASLO00401 505 aaPredicted RBP8.61□□□□□ -1.03
SNRNP40-205ENST00000486941 GNRH1P01148 92 aa8.61□□□□□ -1.03
SNRNP40-205ENST00000486941 IRS1P35568 1242 aa8.61□□□□□ -1.03
SNRNP40-205ENST00000486941 ACDQ96AP0 544 aa8.61□□□□□ -1.03
SNRNP40-205ENST00000486941 KRTAP4-6Q9BYQ5 205 aa8.61□□□□□ -1.03
SNRNP40-205ENST00000486941 MBIPQ9NS73 344 aa8.61□□□□□ -1.03
SNRNP40-205ENST00000486941 PHKA2P46019 1235 aa8.6□□□□□ -1.03
SNRNP40-205ENST00000486941 WDR44Q5JSH3 913 aa8.6□□□□□ -1.03
SNRNP40-205ENST00000486941 GMCL1Q96IK5 515 aa8.6□□□□□ -1.03
SNRNP40-205ENST00000486941 TIMMDC1Q9NPL8 285 aa8.6□□□□□ -1.03
SNRNP40-205ENST00000486941 ZNF330Q9Y3S2 320 aaPredicted RBP8.6□□□□□ -1.03
SNRNP40-205ENST00000486941 VAC14Q08AM6 782 aa8.59□□□□□ -1.03
SNRNP40-205ENST00000486941 TAS1R3Q7RTX0 852 aa8.59□□□□□ -1.03
SNRNP40-205ENST00000486941 ETNK1Q9HBU6 452 aa8.59□□□□□ -1.03
SNRNP40-205ENST00000486941 F11P03951 625 aa8.58□□□□□ -1.04
SNRNP40-205ENST00000486941 GDPD2Q9HCC8 539 aa8.58□□□□□ -1.04
SNRNP40-205ENST00000486941 SUZ12Q15022 739 aaKnown RBP8.57□□□□□ -1.04
SNRNP40-205ENST00000486941 C4orf17Q53FE4 359 aa8.57□□□□□ -1.04
SNRNP40-205ENST00000486941 CNTNAP5Q8WYK1 1306 aa8.56□□□□□ -1.04
SNRNP40-205ENST00000486941 C1orf229Q6ZS94 237 aaPredicted RBP8.56□□□□□ -1.04
SNRNP40-205ENST00000486941 TRIM52Q96A61 297 aa8.56□□□□□ -1.04
SNRNP40-205ENST00000486941 NUCKS1Q9H1E3 243 aaKnown RBP8.56□□□□□ -1.04
SNRNP40-205ENST00000486941 GPAMQ9HCL2 828 aa8.56□□□□□ -1.04
SNRNP40-205ENST00000486941 HCN2Q9UL51 889 aa8.56□□□□□ -1.04
SNRNP40-205ENST00000486941 H7C1W4 665 aa8.55□□□□□ -1.04
SNRNP40-205ENST00000486941 ITGB2P05107 769 aa8.55□□□□□ -1.04
SNRNP40-205ENST00000486941 SCNN1DP51172 638 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms