RNA–Protein interactions for RNA: ENST00000486502.1

TNFSF13B-204, Transcript of TNF superfamily member 13b, humanhuman

TSL 5

Gene TNFSF13B, Length 395 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13B-204ENST00000486502 USP47Q96K76 1375 aa22.09■■□□□ 1.13
TNFSF13B-204ENST00000486502 BTAF1O14981 1849 aa22.08■■□□□ 1.13
TNFSF13B-204ENST00000486502 AKT1S1Q96B36 256 aa22.08■■□□□ 1.13
TNFSF13B-204ENST00000486502 MSH5O43196 834 aa22.07■■□□□ 1.12
TNFSF13B-204ENST00000486502 TATP17735 454 aaPredicted RBP22.07■■□□□ 1.12
TNFSF13B-204ENST00000486502 POLD1P28340 1107 aa22.07■■□□□ 1.12
TNFSF13B-204ENST00000486502 SGIP1Q9BQI5 828 aa22.07■■□□□ 1.12
TNFSF13B-204ENST00000486502 HSP90AB2PQ58FF8 381 aa22.06■■□□□ 1.12
TNFSF13B-204ENST00000486502 SLC16A10Q8TF71 515 aa22.06■■□□□ 1.12
TNFSF13B-204ENST00000486502 CCNL1Q9UK58 526 aaPredicted RBP22.05■■□□□ 1.12
TNFSF13B-204ENST00000486502 SMG6Q86US8 1419 aaKnown RBP22.05■■□□□ 1.12
TNFSF13B-204ENST00000486502 MYOM1P52179 1685 aa22.04■■□□□ 1.12
TNFSF13B-204ENST00000486502 PPM1GO15355 546 aaPredicted RBP22.04■■□□□ 1.12
TNFSF13B-204ENST00000486502 CGNL1Q0VF96 1302 aa22.04■■□□□ 1.12
TNFSF13B-204ENST00000486502 GPR162Q16538 588 aa22.03■■□□□ 1.12
TNFSF13B-204ENST00000486502 POLR3GLQ9BT43 218 aa22.03■■□□□ 1.12
TNFSF13B-204ENST00000486502 RTL1A6NKG5 1358 aa22.02■■□□□ 1.12
TNFSF13B-204ENST00000486502 PELP1Q8IZL8 1130 aaKnown RBP22.02■■□□□ 1.12
TNFSF13B-204ENST00000486502 PCGF6Q9BYE7 350 aa22.02■■□□□ 1.12
TNFSF13B-204ENST00000486502 PNPLA7Q6ZV29 1317 aa22.01■■□□□ 1.11
TNFSF13B-204ENST00000486502 FAM208AQ9UK61 1670 aaKnown RBP22.01■■□□□ 1.11
TNFSF13B-204ENST00000486502 RGPD2P0DJD1 1756 aa22■■□□□ 1.11
TNFSF13B-204ENST00000486502 UTRNP46939 3433 aa22■■□□□ 1.11
TNFSF13B-204ENST00000486502 CARD14Q9BXL6 1004 aa22■■□□□ 1.11
TNFSF13B-204ENST00000486502 MPRIPQ6WCQ1 1025 aa21.99■■□□□ 1.11
TNFSF13B-204ENST00000486502 MEGF6O75095 1541 aa21.99■■□□□ 1.11
TNFSF13B-204ENST00000486502 INSRP06213 1382 aa21.98■■□□□ 1.11
TNFSF13B-204ENST00000486502 EMILIN1Q9Y6C2 1016 aa21.97■■□□□ 1.11
TNFSF13B-204ENST00000486502 ZNF784Q8NCA9 323 aaPredicted RBP21.96■■□□□ 1.11
TNFSF13B-204ENST00000486502 PCDH11XQ9BZA7 1347 aa21.96■■□□□ 1.11
TNFSF13B-204ENST00000486502 PCDH11YQ9BZA8 1340 aa21.96■■□□□ 1.11
TNFSF13B-204ENST00000486502 FLT4P35916 1363 aa21.96■■□□□ 1.11
TNFSF13B-204ENST00000486502 TIMELESSQ9UNS1 1208 aa21.95■■□□□ 1.1
TNFSF13B-204ENST00000486502 PAPPAQ13219 1627 aa21.95■■□□□ 1.1
TNFSF13B-204ENST00000486502 HMGB2P26583 209 aaKnown RBP21.94■■□□□ 1.1
TNFSF13B-204ENST00000486502 COL23A1Q86Y22 540 aaPredicted RBP21.94■■□□□ 1.1
TNFSF13B-204ENST00000486502 NSD2O96028 1365 aa21.94■■□□□ 1.1
TNFSF13B-204ENST00000486502 NSD3Q9BZ95 1437 aa21.93■■□□□ 1.1
TNFSF13B-204ENST00000486502 CYP27B1O15528 508 aa21.92■■□□□ 1.1
TNFSF13B-204ENST00000486502 SPG7Q9UQ90 795 aa21.92■■□□□ 1.1
TNFSF13B-204ENST00000486502 DOT1LQ8TEK3 1739 aa21.92■■□□□ 1.1
TNFSF13B-204ENST00000486502 KIF24Q5T7B8 1368 aa21.91■■□□□ 1.1
TNFSF13B-204ENST00000486502 MAP3K5Q99683 1374 aa21.91■■□□□ 1.1
TNFSF13B-204ENST00000486502 TNNT2P45379 298 aaPredicted RBP21.91■■□□□ 1.1
TNFSF13B-204ENST00000486502 MSL1Q68DK7 614 aa21.91■■□□□ 1.1
TNFSF13B-204ENST00000486502 SMARCC1Q92922 1105 aaPredicted RBP21.9■■□□□ 1.1
TNFSF13B-204ENST00000486502 FLAD1Q8NFF5 587 aa21.89■■□□□ 1.09
TNFSF13B-204ENST00000486502 NLGN2Q8NFZ4 835 aa21.89■■□□□ 1.09
TNFSF13B-204ENST00000486502 WASHC2AQ641Q2 1341 aa21.87■■□□□ 1.09
TNFSF13B-204ENST00000486502 AK7Q96M32 723 aa21.87■■□□□ 1.09
TNFSF13B-204ENST00000486502 EYA1Q99502 592 aa21.87■■□□□ 1.09
TNFSF13B-204ENST00000486502 KIF20BQ96Q89 1820 aa21.87■■□□□ 1.09
TNFSF13B-204ENST00000486502 PALLDQ8WX93 1383 aa21.87■■□□□ 1.09
TNFSF13B-204ENST00000486502 PIGBQ92521 554 aa21.86■■□□□ 1.09
TNFSF13B-204ENST00000486502 SHANK3Q9BYB0 1731 aa21.86■■□□□ 1.09
TNFSF13B-204ENST00000486502 POLKQ9UBT6 870 aa21.85■■□□□ 1.09
TNFSF13B-204ENST00000486502 LY75O60449 1722 aa21.85■■□□□ 1.09
TNFSF13B-204ENST00000486502 CHD4Q14839 1912 aa21.84■■□□□ 1.09
TNFSF13B-204ENST00000486502 GOLGB1Q14789 3259 aaKnown RBP21.83■■□□□ 1.09
TNFSF13B-204ENST00000486502 GRIN3BO60391 1043 aa21.83■■□□□ 1.09
TNFSF13B-204ENST00000486502 PHF14O94880 888 aa21.83■■□□□ 1.09
TNFSF13B-204ENST00000486502 TMOD3Q9NYL9 352 aa21.83■■□□□ 1.09
TNFSF13B-204ENST00000486502 NKX1-1Q15270 411 aaPredicted RBP21.82■■□□□ 1.08
TNFSF13B-204ENST00000486502 IFNL2Q8IZJ0 200 aa21.82■■□□□ 1.08
TNFSF13B-204ENST00000486502 QSER1Q2KHR3 1735 aa21.82■■□□□ 1.08
TNFSF13B-204ENST00000486502 EIF4G2P78344 907 aaKnown RBP eCLIP21.81■■□□□ 1.08
TNFSF13B-204ENST00000486502 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.81■■□□□ 1.08
TNFSF13B-204ENST00000486502 SMIM5Q71RC9 77 aa21.8■■□□□ 1.08
TNFSF13B-204ENST00000486502 PANK3Q9H999 370 aa21.8■■□□□ 1.08
TNFSF13B-204ENST00000486502 TUBGCP6Q96RT7 1819 aa21.8■■□□□ 1.08
TNFSF13B-204ENST00000486502 CLSPNQ9HAW4 1339 aa21.8■■□□□ 1.08
TNFSF13B-204ENST00000486502 MAP2P11137 1827 aaKnown RBP21.79■■□□□ 1.08
TNFSF13B-204ENST00000486502 LOC102724428A0A0B4J2F2 783 aa21.79■■□□□ 1.08
TNFSF13B-204ENST00000486502 SIK1P57059 783 aa21.79■■□□□ 1.08
TNFSF13B-204ENST00000486502 HSPA5P11021 654 aaKnown RBP21.78■■□□□ 1.08
TNFSF13B-204ENST00000486502 PHKG2P15735 406 aa21.78■■□□□ 1.08
TNFSF13B-204ENST00000486502 ATP6V1AP38606 617 aa21.78■■□□□ 1.08
TNFSF13B-204ENST00000486502 EIF4A2Q14240 407 aaKnown RBP21.78■■□□□ 1.08
TNFSF13B-204ENST00000486502 ASAP1Q9ULH1 1129 aa21.78■■□□□ 1.08
TNFSF13B-204ENST00000486502 CD2APQ9Y5K6 639 aa21.78■■□□□ 1.08
TNFSF13B-204ENST00000486502 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.77■■□□□ 1.08
TNFSF13B-204ENST00000486502 YBX3P16989 372 aaKnown RBP eCLIP21.77■■□□□ 1.08
TNFSF13B-204ENST00000486502 CCER1Q8TC90 406 aaPredicted RBP21.76■■□□□ 1.07
TNFSF13B-204ENST00000486502 SENP3-EIF4A1A0A087X0R7 540 aa21.75■■□□□ 1.07
TNFSF13B-204ENST00000486502 C1QTNF8P60827 252 aa21.75■■□□□ 1.07
TNFSF13B-204ENST00000486502 LINC00116Q8NCU8 138 aa21.75■■□□□ 1.07
TNFSF13B-204ENST00000486502 GNPATO15228 680 aa21.74■■□□□ 1.07
TNFSF13B-204ENST00000486502 PLEKHO1Q53GL0 409 aaPredicted RBP21.74■■□□□ 1.07
TNFSF13B-204ENST00000486502 MORC1Q86VD1 984 aa21.74■■□□□ 1.07
TNFSF13B-204ENST00000486502 RBM42Q9BTD8 480 aaKnown RBP21.74■■□□□ 1.07
TNFSF13B-204ENST00000486502 ITGB4P16144 1822 aa21.73■■□□□ 1.07
TNFSF13B-204ENST00000486502 C5P01031 1676 aa21.73■■□□□ 1.07
TNFSF13B-204ENST00000486502 GIGYF1O75420 1035 aaPredicted RBP21.73■■□□□ 1.07
TNFSF13B-204ENST00000486502 AMIGO3Q86WK7 504 aa21.73■■□□□ 1.07
TNFSF13B-204ENST00000486502 SSFA2P28290 1259 aa21.72■■□□□ 1.07
TNFSF13B-204ENST00000486502 ATG3Q9NT62 314 aa21.72■■□□□ 1.07
TNFSF13B-204ENST00000486502 WWC3Q9ULE0 1092 aa21.72■■□□□ 1.07
TNFSF13B-204ENST00000486502 COL24A1Q17RW2 1714 aa21.72■■□□□ 1.07
TNFSF13B-204ENST00000486502 ITPK1Q13572 414 aa21.71■■□□□ 1.07
TNFSF13B-204ENST00000486502 HSP90AB1P08238 724 aaKnown RBP21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms