RNA–Protein interactions for RNA: ENST00000486441.1

SDCCAG3-211, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 5

Gene SDCCAG3, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-211ENST00000486441 ZCRB1Q8TBF4 217 aaKnown RBP20.22■□□□□ 0.83
SDCCAG3-211ENST00000486441 TUBGCP6Q96RT7 1819 aa20.22■□□□□ 0.83
SDCCAG3-211ENST00000486441 MEGF6O75095 1541 aa20.22■□□□□ 0.83
SDCCAG3-211ENST00000486441 SHANK3Q9BYB0 1731 aa20.22■□□□□ 0.83
SDCCAG3-211ENST00000486441 ST20-MTHFSA0A0A6YYL1 179 aa20.21■□□□□ 0.83
SDCCAG3-211ENST00000486441 GPR162Q16538 588 aa20.21■□□□□ 0.83
SDCCAG3-211ENST00000486441 NBPF6Q5VWK0 638 aa20.21■□□□□ 0.83
SDCCAG3-211ENST00000486441 NBPF4Q96M43 638 aa20.21■□□□□ 0.83
SDCCAG3-211ENST00000486441 TFCP2L1Q9NZI6 479 aa20.21■□□□□ 0.83
SDCCAG3-211ENST00000486441 LY75O60449 1722 aa20.2■□□□□ 0.82
SDCCAG3-211ENST00000486441 SYTL4Q96C24 671 aaPredicted RBP20.2■□□□□ 0.82
SDCCAG3-211ENST00000486441 COG3Q96JB2 828 aa20.2■□□□□ 0.82
SDCCAG3-211ENST00000486441 RGPD2P0DJD1 1756 aa20.2■□□□□ 0.82
SDCCAG3-211ENST00000486441 COL23A1Q86Y22 540 aaPredicted RBP20.19■□□□□ 0.82
SDCCAG3-211ENST00000486441 FYB1O15117 783 aa20.18■□□□□ 0.82
SDCCAG3-211ENST00000486441 YBX3P16989 372 aaKnown RBP eCLIP20.17■□□□□ 0.82
SDCCAG3-211ENST00000486441 POLD1P28340 1107 aa20.17■□□□□ 0.82
SDCCAG3-211ENST00000486441 AMPHP49418 695 aa20.17■□□□□ 0.82
SDCCAG3-211ENST00000486441 RRS1Q15050 365 aaKnown RBP20.17■□□□□ 0.82
SDCCAG3-211ENST00000486441 DOT1LQ8TEK3 1739 aa20.16■□□□□ 0.82
SDCCAG3-211ENST00000486441 CCNL1Q9UK58 526 aaPredicted RBP20.16■□□□□ 0.82
SDCCAG3-211ENST00000486441 SENP3-EIF4A1A0A087X0R7 540 aa20.15■□□□□ 0.82
SDCCAG3-211ENST00000486441 KLHL34Q8N239 644 aa20.15■□□□□ 0.82
SDCCAG3-211ENST00000486441 USHBP1Q8N6Y0 703 aa20.15■□□□□ 0.82
SDCCAG3-211ENST00000486441 GGNBP2Q9H3C7 697 aa20.13■□□□□ 0.81
SDCCAG3-211ENST00000486441 RTL1A6NKG5 1358 aa20.12■□□□□ 0.81
SDCCAG3-211ENST00000486441 HSP90AB2PQ58FF8 381 aa20.12■□□□□ 0.81
SDCCAG3-211ENST00000486441 TONSLQ96HA7 1378 aa20.11■□□□□ 0.81
SDCCAG3-211ENST00000486441 AMIGO3Q86WK7 504 aa20.11■□□□□ 0.81
SDCCAG3-211ENST00000486441 CGNL1Q0VF96 1302 aa20.1■□□□□ 0.81
SDCCAG3-211ENST00000486441 CYP27B1O15528 508 aa20.1■□□□□ 0.81
SDCCAG3-211ENST00000486441 PELP1Q8IZL8 1130 aaKnown RBP20.1■□□□□ 0.81
SDCCAG3-211ENST00000486441 USP47Q96K76 1375 aa20.09■□□□□ 0.81
SDCCAG3-211ENST00000486441 MSL1Q68DK7 614 aa20.09■□□□□ 0.81
SDCCAG3-211ENST00000486441 INSRP06213 1382 aa20.07■□□□□ 0.8
SDCCAG3-211ENST00000486441 GRIN3BO60391 1043 aa20.06■□□□□ 0.8
SDCCAG3-211ENST00000486441 GIGYF1O75420 1035 aaPredicted RBP20.06■□□□□ 0.8
SDCCAG3-211ENST00000486441 SMIM5Q71RC9 77 aa20.06■□□□□ 0.8
SDCCAG3-211ENST00000486441 RAPGEF4Q8WZA2 1011 aa20.06■□□□□ 0.8
SDCCAG3-211ENST00000486441 CARD14Q9BXL6 1004 aa20.06■□□□□ 0.8
SDCCAG3-211ENST00000486441 MSH5O43196 834 aa20.05■□□□□ 0.8
SDCCAG3-211ENST00000486441 SLC24A1O60721 1099 aa20.05■□□□□ 0.8
SDCCAG3-211ENST00000486441 TATP17735 454 aaPredicted RBP20.05■□□□□ 0.8
SDCCAG3-211ENST00000486441 CD2APQ9Y5K6 639 aa20.04■□□□□ 0.8
SDCCAG3-211ENST00000486441 PALLDQ8WX93 1383 aa20.04■□□□□ 0.8
SDCCAG3-211ENST00000486441 MPRIPQ6WCQ1 1025 aa20.03■□□□□ 0.8
SDCCAG3-211ENST00000486441 NKX1-1Q15270 411 aaPredicted RBP20.02■□□□□ 0.8
SDCCAG3-211ENST00000486441 PIGBQ92521 554 aa20.02■□□□□ 0.8
SDCCAG3-211ENST00000486441 TAF1LQ8IZX4 1826 aa20.02■□□□□ 0.79
SDCCAG3-211ENST00000486441 NCAPD2Q15021 1401 aa20.02■□□□□ 0.79
SDCCAG3-211ENST00000486441 PCDH11XQ9BZA7 1347 aa20.02■□□□□ 0.79
SDCCAG3-211ENST00000486441 PCDH11YQ9BZA8 1340 aa20.02■□□□□ 0.79
SDCCAG3-211ENST00000486441 C5P01031 1676 aa20.01■□□□□ 0.79
SDCCAG3-211ENST00000486441 FLT4P35916 1363 aa20.01■□□□□ 0.79
SDCCAG3-211ENST00000486441 EMILIN1Q9Y6C2 1016 aa20.01■□□□□ 0.79
SDCCAG3-211ENST00000486441 TOGARAM1Q9Y4F4 1720 aa20.01■□□□□ 0.79
SDCCAG3-211ENST00000486441 KIF24Q5T7B8 1368 aa20■□□□□ 0.79
SDCCAG3-211ENST00000486441 TMF1P82094 1093 aa20■□□□□ 0.79
SDCCAG3-211ENST00000486441 FLAD1Q8NFF5 587 aa20■□□□□ 0.79
SDCCAG3-211ENST00000486441 ATP10DQ9P241 1426 aa19.99■□□□□ 0.79
SDCCAG3-211ENST00000486441 ADCY9O60503 1353 aa19.98■□□□□ 0.79
SDCCAG3-211ENST00000486441 SMG6Q86US8 1419 aaKnown RBP19.98■□□□□ 0.79
SDCCAG3-211ENST00000486441 MAP2P11137 1827 aaKnown RBP19.97■□□□□ 0.79
SDCCAG3-211ENST00000486441 ITGB4P16144 1822 aa19.97■□□□□ 0.79
SDCCAG3-211ENST00000486441 C4BP0C0L5 1744 aa19.96■□□□□ 0.79
SDCCAG3-211ENST00000486441 LINC00116Q8NCU8 138 aa19.96■□□□□ 0.79
SDCCAG3-211ENST00000486441 SMARCC1Q92922 1105 aaPredicted RBP19.96■□□□□ 0.79
SDCCAG3-211ENST00000486441 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.95■□□□□ 0.78
SDCCAG3-211ENST00000486441 UBR3Q6ZT12 1888 aa19.94■□□□□ 0.78
SDCCAG3-211ENST00000486441 PKD1L3Q7Z443 1732 aa19.94■□□□□ 0.78
SDCCAG3-211ENST00000486441 ITPK1Q13572 414 aa19.94■□□□□ 0.78
SDCCAG3-211ENST00000486441 EYA1Q99502 592 aa19.94■□□□□ 0.78
SDCCAG3-211ENST00000486441 WASHC2AQ641Q2 1341 aa19.94■□□□□ 0.78
SDCCAG3-211ENST00000486441 LOC102724428A0A0B4J2F2 783 aa19.93■□□□□ 0.78
SDCCAG3-211ENST00000486441 SIK1P57059 783 aa19.93■□□□□ 0.78
SDCCAG3-211ENST00000486441 ASAP1Q9ULH1 1129 aa19.93■□□□□ 0.78
SDCCAG3-211ENST00000486441 PHF14O94880 888 aa19.92■□□□□ 0.78
SDCCAG3-211ENST00000486441 AK7Q96M32 723 aa19.92■□□□□ 0.78
SDCCAG3-211ENST00000486441 IGSF1Q8N6C5 1336 aa19.92■□□□□ 0.78
SDCCAG3-211ENST00000486441 KIF20BQ96Q89 1820 aa19.92■□□□□ 0.78
SDCCAG3-211ENST00000486441 HMGB2P26583 209 aaKnown RBP19.91■□□□□ 0.78
SDCCAG3-211ENST00000486441 SSFA2P28290 1259 aa19.91■□□□□ 0.78
SDCCAG3-211ENST00000486441 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.91■□□□□ 0.78
SDCCAG3-211ENST00000486441 NSD3Q9BZ95 1437 aa19.91■□□□□ 0.78
SDCCAG3-211ENST00000486441 SLC4A9Q96Q91 983 aa19.9■□□□□ 0.78
SDCCAG3-211ENST00000486441 ATG3Q9NT62 314 aa19.9■□□□□ 0.78
SDCCAG3-211ENST00000486441 POLKQ9UBT6 870 aa19.9■□□□□ 0.78
SDCCAG3-211ENST00000486441 WWC3Q9ULE0 1092 aa19.9■□□□□ 0.78
SDCCAG3-211ENST00000486441 PHKG2P15735 406 aa19.89■□□□□ 0.77
SDCCAG3-211ENST00000486441 IFFO2Q5TF58 517 aa19.89■□□□□ 0.77
SDCCAG3-211ENST00000486441 GPBP1L1Q9HC44 474 aaPredicted RBP19.89■□□□□ 0.77
SDCCAG3-211ENST00000486441 SPG7Q9UQ90 795 aa19.89■□□□□ 0.77
SDCCAG3-211ENST00000486441 CDCA8Q53HL2 280 aa19.88■□□□□ 0.77
SDCCAG3-211ENST00000486441 PPM1GO15355 546 aaPredicted RBP19.87■□□□□ 0.77
SDCCAG3-211ENST00000486441 ANKRD26Q9UPS8 1709 aa19.87■□□□□ 0.77
SDCCAG3-211ENST00000486441 ZNF526Q8TF50 670 aaPredicted RBP19.86■□□□□ 0.77
SDCCAG3-211ENST00000486441 KIF3CO14782 793 aa19.85■□□□□ 0.77
SDCCAG3-211ENST00000486441 HSPA6P17066 643 aa19.85■□□□□ 0.77
SDCCAG3-211ENST00000486441 ATP6V1AP38606 617 aa19.85■□□□□ 0.77
SDCCAG3-211ENST00000486441 IFNL2Q8IZJ0 200 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms