RNA–Protein interactions for RNA: ENST00000486311.5

SREBF1-214, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 473 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-214ENST00000486311 LRRC4BQ9NT99 713 aa31.1■■■□□ 2.57
SREBF1-214ENST00000486311 PTGER2P43116 358 aa31.09■■■□□ 2.57
SREBF1-214ENST00000486311 RAPGEF4Q8WZA2 1011 aa31.09■■■□□ 2.57
SREBF1-214ENST00000486311 KIF20BQ96Q89 1820 aa31.09■■■□□ 2.57
SREBF1-214ENST00000486311 PAPPAQ13219 1627 aa31.09■■■□□ 2.57
SREBF1-214ENST00000486311 SLC27A3Q5K4L6 730 aa31.08■■■□□ 2.57
SREBF1-214ENST00000486311 ATF5Q9Y2D1 282 aaPredicted RBP31.08■■■□□ 2.57
SREBF1-214ENST00000486311 SYTL4Q96C24 671 aaPredicted RBP31.07■■■□□ 2.56
SREBF1-214ENST00000486311 EMILIN1Q9Y6C2 1016 aa31.07■■■□□ 2.56
SREBF1-214ENST00000486311 ZNF827Q17R98 1081 aa31.06■■■□□ 2.56
SREBF1-214ENST00000486311 MTFR1LQ9H019 292 aa31.06■■■□□ 2.56
SREBF1-214ENST00000486311 RGPD2P0DJD1 1756 aa31.06■■■□□ 2.56
SREBF1-214ENST00000486311 NSD2O96028 1365 aa31.05■■■□□ 2.56
SREBF1-214ENST00000486311 TATP17735 454 aaPredicted RBP31.05■■■□□ 2.56
SREBF1-214ENST00000486311 EIF4G2P78344 907 aaKnown RBP eCLIP31.03■■■□□ 2.56
SREBF1-214ENST00000486311 SHANK3Q9BYB0 1731 aa31.02■■■□□ 2.56
SREBF1-214ENST00000486311 AKT1S1Q96B36 256 aa31.02■■■□□ 2.56
SREBF1-214ENST00000486311 CCER1Q8TC90 406 aaPredicted RBP31.01■■■□□ 2.55
SREBF1-214ENST00000486311 SGIP1Q9BQI5 828 aa31.01■■■□□ 2.55
SREBF1-214ENST00000486311 POLR3GLQ9BT43 218 aa31.01■■■□□ 2.55
SREBF1-214ENST00000486311 HSPA5P11021 654 aaKnown RBP30.99■■■□□ 2.55
SREBF1-214ENST00000486311 PCDH11XQ9BZA7 1347 aa30.98■■■□□ 2.55
SREBF1-214ENST00000486311 PCDH11YQ9BZA8 1340 aa30.98■■■□□ 2.55
SREBF1-214ENST00000486311 KAT6BQ8WYB5 2073 aa30.98■■■□□ 2.55
SREBF1-214ENST00000486311 PPM1GO15355 546 aaPredicted RBP30.98■■■□□ 2.55
SREBF1-214ENST00000486311 DOT1LQ8TEK3 1739 aa30.98■■■□□ 2.55
SREBF1-214ENST00000486311 WASHC2AQ641Q2 1341 aa30.98■■■□□ 2.55
SREBF1-214ENST00000486311 DCAF8L1A6NGE4 600 aa30.97■■■□□ 2.55
SREBF1-214ENST00000486311 YY1P25490 414 aa30.97■■■□□ 2.55
SREBF1-214ENST00000486311 NCAPD2Q15021 1401 aa30.96■■■□□ 2.55
SREBF1-214ENST00000486311 KCNQ4P56696 695 aa30.95■■■□□ 2.55
SREBF1-214ENST00000486311 POLKQ9UBT6 870 aa30.94■■■□□ 2.54
SREBF1-214ENST00000486311 CYP27B1O15528 508 aa30.92■■■□□ 2.54
SREBF1-214ENST00000486311 SLC16A10Q8TF71 515 aa30.92■■■□□ 2.54
SREBF1-214ENST00000486311 FHDC1Q9C0D6 1143 aaPredicted RBP30.92■■■□□ 2.54
SREBF1-214ENST00000486311 CCNL1Q9UK58 526 aaPredicted RBP30.92■■■□□ 2.54
SREBF1-214ENST00000486311 PNPLA7Q6ZV29 1317 aa30.91■■■□□ 2.54
SREBF1-214ENST00000486311 ANKRD26Q9UPS8 1709 aa30.9■■■□□ 2.54
SREBF1-214ENST00000486311 ARXQ96QS3 562 aa30.9■■■□□ 2.54
SREBF1-214ENST00000486311 SYT17Q9BSW7 474 aa30.9■■■□□ 2.54
SREBF1-214ENST00000486311 TFCP2L1Q9NZI6 479 aa30.9■■■□□ 2.54
SREBF1-214ENST00000486311 EYA1Q99502 592 aa30.89■■■□□ 2.54
SREBF1-214ENST00000486311 PANK3Q9H999 370 aa30.89■■■□□ 2.54
SREBF1-214ENST00000486311 LY75O60449 1722 aa30.88■■■□□ 2.53
SREBF1-214ENST00000486311 TNNT2P45379 298 aaPredicted RBP30.85■■■□□ 2.53
SREBF1-214ENST00000486311 NKX1-1Q15270 411 aaPredicted RBP30.85■■■□□ 2.53
SREBF1-214ENST00000486311 SPG7Q9UQ90 795 aa30.85■■■□□ 2.53
SREBF1-214ENST00000486311 MAP3K5Q99683 1374 aa30.84■■■□□ 2.53
SREBF1-214ENST00000486311 MPRIPQ6WCQ1 1025 aa30.84■■■□□ 2.53
SREBF1-214ENST00000486311 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.84■■■□□ 2.53
SREBF1-214ENST00000486311 QSER1Q2KHR3 1735 aa30.83■■■□□ 2.53
SREBF1-214ENST00000486311 PALLDQ8WX93 1383 aa30.82■■■□□ 2.52
SREBF1-214ENST00000486311 PKD1L3Q7Z443 1732 aa30.82■■■□□ 2.52
SREBF1-214ENST00000486311 EIF4A2Q14240 407 aaKnown RBP30.82■■■□□ 2.52
SREBF1-214ENST00000486311 HMGB2P26583 209 aaKnown RBP30.8■■■□□ 2.52
SREBF1-214ENST00000486311 POLD1P28340 1107 aa30.8■■■□□ 2.52
SREBF1-214ENST00000486311 MAP2P11137 1827 aaKnown RBP30.78■■■□□ 2.52
SREBF1-214ENST00000486311 SMARCC1Q92922 1105 aaPredicted RBP30.78■■■□□ 2.52
SREBF1-214ENST00000486311 PIGBQ92521 554 aa30.77■■■□□ 2.52
SREBF1-214ENST00000486311 PLEKHG2Q9H7P9 1386 aa30.77■■■□□ 2.52
SREBF1-214ENST00000486311 COL23A1Q86Y22 540 aaPredicted RBP30.76■■■□□ 2.51
SREBF1-214ENST00000486311 TOGARAM1Q9Y4F4 1720 aa30.76■■■□□ 2.51
SREBF1-214ENST00000486311 UTRNP46939 3433 aa30.75■■■□□ 2.51
SREBF1-214ENST00000486311 IFNL2Q8IZJ0 200 aa30.75■■■□□ 2.51
SREBF1-214ENST00000486311 IGSF1Q8N6C5 1336 aa30.74■■■□□ 2.51
SREBF1-214ENST00000486311 PHKG2P15735 406 aa30.74■■■□□ 2.51
SREBF1-214ENST00000486311 TUBGCP6Q96RT7 1819 aa30.73■■■□□ 2.51
SREBF1-214ENST00000486311 MSH5O43196 834 aa30.72■■■□□ 2.51
SREBF1-214ENST00000486311 MORC1Q86VD1 984 aa30.72■■■□□ 2.51
SREBF1-214ENST00000486311 COL24A1Q17RW2 1714 aa30.71■■■□□ 2.51
SREBF1-214ENST00000486311 FLAD1Q8NFF5 587 aa30.7■■■□□ 2.51
SREBF1-214ENST00000486311 KNSTRNQ9Y448 316 aa30.7■■■□□ 2.51
SREBF1-214ENST00000486311 TMOD3Q9NYL9 352 aa30.69■■■□□ 2.5
SREBF1-214ENST00000486311 C5P01031 1676 aa30.68■■■□□ 2.5
SREBF1-214ENST00000486311 CHD4Q14839 1912 aa30.67■■■□□ 2.5
SREBF1-214ENST00000486311 KLHL34Q8N239 644 aa30.67■■■□□ 2.5
SREBF1-214ENST00000486311 LOC102724428A0A0B4J2F2 783 aa30.65■■■□□ 2.5
SREBF1-214ENST00000486311 SIK1P57059 783 aa30.65■■■□□ 2.5
SREBF1-214ENST00000486311 ITGB4P16144 1822 aa30.65■■■□□ 2.5
SREBF1-214ENST00000486311 KIF7Q2M1P5 1343 aa30.65■■■□□ 2.5
SREBF1-214ENST00000486311 AK7Q96M32 723 aa30.64■■■□□ 2.5
SREBF1-214ENST00000486311 ASAP1Q9ULH1 1129 aa30.64■■■□□ 2.5
SREBF1-214ENST00000486311 PLEKHO1Q53GL0 409 aaPredicted RBP30.63■■■□□ 2.49
SREBF1-214ENST00000486311 AMER1Q5JTC6 1135 aaPredicted RBP30.63■■■□□ 2.49
SREBF1-214ENST00000486311 MSL1Q68DK7 614 aa30.62■■■□□ 2.49
SREBF1-214ENST00000486311 ATG3Q9NT62 314 aa30.61■■■□□ 2.49
SREBF1-214ENST00000486311 C4BP0C0L5 1744 aa30.61■■■□□ 2.49
SREBF1-214ENST00000486311 ERVV-2B6SEH9 535 aa30.6■■■□□ 2.49
SREBF1-214ENST00000486311 HSP90AB1P08238 724 aaKnown RBP30.6■■■□□ 2.49
SREBF1-214ENST00000486311 GPR162Q16538 588 aa30.6■■■□□ 2.49
SREBF1-214ENST00000486311 AMOTQ4VCS5 1084 aa30.6■■■□□ 2.49
SREBF1-214ENST00000486311 AMIGO3Q86WK7 504 aa30.6■■■□□ 2.49
SREBF1-214ENST00000486311 LINC00116Q8NCU8 138 aa30.6■■■□□ 2.49
SREBF1-214ENST00000486311 NLGN2Q8NFZ4 835 aa30.6■■■□□ 2.49
SREBF1-214ENST00000486311 AEBP1Q8IUX7 1158 aa30.59■■■□□ 2.49
SREBF1-214ENST00000486311 DCAF5Q96JK2 942 aa30.59■■■□□ 2.49
SREBF1-214ENST00000486311 TAF1LQ8IZX4 1826 aa30.59■■■□□ 2.49
SREBF1-214ENST00000486311 ZNF784Q8NCA9 323 aaPredicted RBP30.58■■■□□ 2.49
SREBF1-214ENST00000486311 ITPK1Q13572 414 aa30.57■■■□□ 2.48
SREBF1-214ENST00000486311 ZNF530Q6P9A1 599 aaPredicted RBP30.57■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms