RNA–Protein interactions for RNA: ENST00000486268.5

ERGIC3-215, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 584 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-215ENST00000486268 UNC5CLQ8IV45 518 aa15.33■□□□□ 0.04
ERGIC3-215ENST00000486268 RGPD2P0DJD1 1756 aa15.33■□□□□ 0.04
ERGIC3-215ENST00000486268 HSP90AB2PQ58FF8 381 aa15.32■□□□□ 0.04
ERGIC3-215ENST00000486268 GLI3P10071 1580 aa15.32■□□□□ 0.04
ERGIC3-215ENST00000486268 HMOX1P09601 288 aa15.31■□□□□ 0.04
ERGIC3-215ENST00000486268 HOXC9P31274 260 aa15.31■□□□□ 0.04
ERGIC3-215ENST00000486268 IP6K1Q92551 441 aa15.31■□□□□ 0.04
ERGIC3-215ENST00000486268 KDRP35968 1356 aa15.3■□□□□ 0.04
ERGIC3-215ENST00000486268 ZNF772Q68DY9 489 aaPredicted RBP15.3■□□□□ 0.04
ERGIC3-215ENST00000486268 FAM208AQ9UK61 1670 aaKnown RBP15.29■□□□□ 0.04
ERGIC3-215ENST00000486268 IGSF1Q8N6C5 1336 aa15.29■□□□□ 0.04
ERGIC3-215ENST00000486268 SULT6B1Q6IMI4 303 aa15.29■□□□□ 0.04
ERGIC3-215ENST00000486268 ERBB3P21860 1342 aa15.28■□□□□ 0.04
ERGIC3-215ENST00000486268 VPS72Q15906 364 aa15.28■□□□□ 0.04
ERGIC3-215ENST00000486268 LARP1Q6PKG0 1096 aaKnown RBP15.28■□□□□ 0.04
ERGIC3-215ENST00000486268 PHACTR3Q96KR7 559 aa15.28■□□□□ 0.04
ERGIC3-215ENST00000486268 QTRT2Q9H974 415 aaKnown RBP15.28■□□□□ 0.04
ERGIC3-215ENST00000486268 STRN4Q9NRL3 753 aa15.28■□□□□ 0.04
ERGIC3-215ENST00000486268 WNK3Q9BYP7 1800 aa15.28■□□□□ 0.04
ERGIC3-215ENST00000486268 ZNF428Q96B54 188 aa15.27■□□□□ 0.04
ERGIC3-215ENST00000486268 TRPC5Q9UL62 973 aaPredicted RBP15.27■□□□□ 0.04
ERGIC3-215ENST00000486268 SPATA31A5Q5VU36 1347 aa15.26■□□□□ 0.03
ERGIC3-215ENST00000486268 SPATA31A7Q8IWB4 1347 aa15.26■□□□□ 0.03
ERGIC3-215ENST00000486268 WDR17Q8IZU2 1322 aa15.26■□□□□ 0.03
ERGIC3-215ENST00000486268 FANCIQ9NVI1 1328 aa15.26■□□□□ 0.03
ERGIC3-215ENST00000486268 GNAI1P63096 354 aa15.26■□□□□ 0.03
ERGIC3-215ENST00000486268 ANKRD24Q8TF21 1146 aa15.26■□□□□ 0.03
ERGIC3-215ENST00000486268 IFT57Q9NWB7 429 aa15.26■□□□□ 0.03
ERGIC3-215ENST00000486268 CRB1P82279 1406 aa15.26■□□□□ 0.03
ERGIC3-215ENST00000486268 EVA1CP58658 441 aa15.25■□□□□ 0.03
ERGIC3-215ENST00000486268 SPATA31A1Q5TZJ5 1347 aa15.24■□□□□ 0.03
ERGIC3-215ENST00000486268 HTATSF1O43719 755 aaKnown RBP15.24■□□□□ 0.03
ERGIC3-215ENST00000486268 PDE3AQ14432 1141 aa15.24■□□□□ 0.03
ERGIC3-215ENST00000486268 GAS2L2Q8NHY3 880 aa15.24■□□□□ 0.03
ERGIC3-215ENST00000486268 LTV1Q96GA3 475 aaPredicted RBP15.24■□□□□ 0.03
ERGIC3-215ENST00000486268 GJD4Q96KN9 370 aaPredicted RBP15.24■□□□□ 0.03
ERGIC3-215ENST00000486268 EYA1Q99502 592 aa15.24■□□□□ 0.03
ERGIC3-215ENST00000486268 THSD7AQ9UPZ6 1657 aa15.23■□□□□ 0.03
ERGIC3-215ENST00000486268 RARSP54136 660 aaKnown RBP15.23■□□□□ 0.03
ERGIC3-215ENST00000486268 AEBP1Q8IUX7 1158 aa15.23■□□□□ 0.03
ERGIC3-215ENST00000486268 BRWD3Q6RI45 1802 aa15.22■□□□□ 0.03
ERGIC3-215ENST00000486268 ZNF853P0CG23 659 aa15.22■□□□□ 0.03
ERGIC3-215ENST00000486268 MS4A1P11836 297 aa15.22■□□□□ 0.03
ERGIC3-215ENST00000486268 RBM6P78332 1123 aaKnown RBP15.22■□□□□ 0.03
ERGIC3-215ENST00000486268 AAMPQ13685 434 aa15.22■□□□□ 0.03
ERGIC3-215ENST00000486268 TOM1L2Q6ZVM7 507 aa15.22■□□□□ 0.03
ERGIC3-215ENST00000486268 UPF1Q92900 1129 aaKnown RBP eCLIP15.22■□□□□ 0.03
ERGIC3-215ENST00000486268 CCDC136Q96JN2 1154 aa15.22■□□□□ 0.03
ERGIC3-215ENST00000486268 CFAP44Q96MT7 982 aa15.22■□□□□ 0.03
ERGIC3-215ENST00000486268 CSB-PGBD3P0DP91 1061 aa15.21■□□□□ 0.03
ERGIC3-215ENST00000486268 CARD10Q9BWT7 1032 aa15.21■□□□□ 0.03
ERGIC3-215ENST00000486268 CCDC9Q9Y3X0 531 aaKnown RBP15.21■□□□□ 0.03
ERGIC3-215ENST00000486268 PARP4Q9UKK3 1724 aaKnown RBP15.2■□□□□ 0.02
ERGIC3-215ENST00000486268 DISP2A7MBM2 1401 aa15.2■□□□□ 0.02
ERGIC3-215ENST00000486268 RGS12O14924 1447 aa15.2■□□□□ 0.02
ERGIC3-215ENST00000486268 NCAPD2Q15021 1401 aa15.2■□□□□ 0.02
ERGIC3-215ENST00000486268 RXRBP28702 533 aa15.2■□□□□ 0.02
ERGIC3-215ENST00000486268 EXOC6Q8TAG9 804 aa15.2■□□□□ 0.02
ERGIC3-215ENST00000486268 USP35Q9P2H5 1018 aa15.2■□□□□ 0.02
ERGIC3-215ENST00000486268 PLIN1O60240 522 aa15.19■□□□□ 0.02
ERGIC3-215ENST00000486268 BCAR3O75815 825 aa15.19■□□□□ 0.02
ERGIC3-215ENST00000486268 EXOSC9Q06265 439 aaKnown RBP15.19■□□□□ 0.02
ERGIC3-215ENST00000486268 ALDH1L2Q3SY69 923 aa15.19■□□□□ 0.02
ERGIC3-215ENST00000486268 NBPF6Q5VWK0 638 aa15.19■□□□□ 0.02
ERGIC3-215ENST00000486268 NBPF4Q96M43 638 aa15.19■□□□□ 0.02
ERGIC3-215ENST00000486268 LRRC37A3O60309 1634 aa15.18■□□□□ 0.02
ERGIC3-215ENST00000486268 DLG5Q8TDM6 1919 aa15.18■□□□□ 0.02
ERGIC3-215ENST00000486268 ONECUT3O60422 494 aaPredicted RBP15.18■□□□□ 0.02
ERGIC3-215ENST00000486268 CANXP27824 592 aaKnown RBP15.18■□□□□ 0.02
ERGIC3-215ENST00000486268 BRPF1P55201 1214 aaPredicted RBP15.18■□□□□ 0.02
ERGIC3-215ENST00000486268 FAM98CQ17RN3 349 aaKnown RBP15.18■□□□□ 0.02
ERGIC3-215ENST00000486268 B4GALNT3Q6L9W6 998 aa15.18■□□□□ 0.02
ERGIC3-215ENST00000486268 RTF1Q92541 710 aaKnown RBP15.18■□□□□ 0.02
ERGIC3-215ENST00000486268 TSR2Q969E8 191 aaKnown RBP15.18■□□□□ 0.02
ERGIC3-215ENST00000486268 CRBNQ96SW2 442 aa15.18■□□□□ 0.02
ERGIC3-215ENST00000486268 NLRP2Q9NX02 1062 aa15.18■□□□□ 0.02
ERGIC3-215ENST00000486268 PLEKHG2Q9H7P9 1386 aa15.18■□□□□ 0.02
ERGIC3-215ENST00000486268 BARGINQ6ZT62 677 aa15.17■□□□□ 0.02
ERGIC3-215ENST00000486268 USHBP1Q8N6Y0 703 aa15.17■□□□□ 0.02
ERGIC3-215ENST00000486268 THRAP3Q9Y2W1 955 aaKnown RBP15.17■□□□□ 0.02
ERGIC3-215ENST00000486268 SHANK3Q9BYB0 1731 aa15.17■□□□□ 0.02
ERGIC3-215ENST00000486268 MTHFSDQ2M296 383 aaKnown RBP15.16■□□□□ 0.02
ERGIC3-215ENST00000486268 BABAM1Q9NWV8 329 aa15.16■□□□□ 0.02
ERGIC3-215ENST00000486268 MEGF6O75095 1541 aa15.16■□□□□ 0.02
ERGIC3-215ENST00000486268 KIF16BQ96L93 1317 aa15.15■□□□□ 0.02
ERGIC3-215ENST00000486268 GNAT3A8MTJ3 354 aa15.14■□□□□ 0.01
ERGIC3-215ENST00000486268 CHL1O00533 1208 aa15.14■□□□□ 0.01
ERGIC3-215ENST00000486268 IPO8O15397 1037 aaKnown RBP15.14■□□□□ 0.01
ERGIC3-215ENST00000486268 AMOTQ4VCS5 1084 aa15.14■□□□□ 0.01
ERGIC3-215ENST00000486268 C20orf194Q5TEA3 1177 aa15.14■□□□□ 0.01
ERGIC3-215ENST00000486268 ZKSCAN2Q63HK3 967 aa15.14■□□□□ 0.01
ERGIC3-215ENST00000486268 SEPT12Q8IYM1 358 aa15.14■□□□□ 0.01
ERGIC3-215ENST00000486268 MBIPQ9NS73 344 aa15.14■□□□□ 0.01
ERGIC3-215ENST00000486268 LAS1LQ9Y4W2 734 aaKnown RBP15.14■□□□□ 0.01
ERGIC3-215ENST00000486268 PKD1L3Q7Z443 1732 aa15.13■□□□□ 0.01
ERGIC3-215ENST00000486268 SMC4Q9NTJ3 1288 aa15.13■□□□□ 0.01
ERGIC3-215ENST00000486268 MAP3K5Q99683 1374 aa15.12■□□□□ 0.01
ERGIC3-215ENST00000486268 THUMPD2Q9BTF0 503 aaKnown RBP15.12■□□□□ 0.01
ERGIC3-215ENST00000486268 SOS1Q07889 1333 aaPredicted RBP15.12■□□□□ 0.01
ERGIC3-215ENST00000486268 OVOS2A0A0G2JMS6 1433 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms