RNA–Protein interactions for RNA: ENST00000486204.5

SSR4-211, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 658 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-211ENST00000486204 GOLGB1Q14789 3259 aaKnown RBP17.82■□□□□ 0.44
SSR4-211ENST00000486204 ZNF827Q17R98 1081 aa17.81■□□□□ 0.44
SSR4-211ENST00000486204 ARHGEF25Q86VW2 580 aa17.81■□□□□ 0.44
SSR4-211ENST00000486204 GGNBP2Q9H3C7 697 aa17.81■□□□□ 0.44
SSR4-211ENST00000486204 GRIN3BO60391 1043 aa17.8■□□□□ 0.44
SSR4-211ENST00000486204 HSPA6P17066 643 aa17.8■□□□□ 0.44
SSR4-211ENST00000486204 NLGN2Q8NFZ4 835 aa17.8■□□□□ 0.44
SSR4-211ENST00000486204 SLC16A10Q8TF71 515 aa17.8■□□□□ 0.44
SSR4-211ENST00000486204 SOX12O15370 315 aa17.79■□□□□ 0.44
SSR4-211ENST00000486204 CSB-PGBD3P0DP91 1061 aa17.79■□□□□ 0.44
SSR4-211ENST00000486204 ACSBG1Q96GR2 724 aa17.79■□□□□ 0.44
SSR4-211ENST00000486204 COG3Q96JB2 828 aa17.79■□□□□ 0.44
SSR4-211ENST00000486204 CARD10Q9BWT7 1032 aa17.79■□□□□ 0.44
SSR4-211ENST00000486204 CGNL1Q0VF96 1302 aa17.77■□□□□ 0.44
SSR4-211ENST00000486204 YBX3P16989 372 aaKnown RBP eCLIP17.77■□□□□ 0.444e-12■■■□□ 16.3
SSR4-211ENST00000486204 GPBP1L1Q9HC44 474 aaPredicted RBP17.77■□□□□ 0.44
SSR4-211ENST00000486204 ATP10DQ9P241 1426 aa17.76■□□□□ 0.43
SSR4-211ENST00000486204 LRRC4BQ9NT99 713 aa17.76■□□□□ 0.43
SSR4-211ENST00000486204 NSD2O96028 1365 aa17.76■□□□□ 0.43
SSR4-211ENST00000486204 AKT1S1Q96B36 256 aa17.75■□□□□ 0.43
SSR4-211ENST00000486204 PAPPAQ13219 1627 aa17.75■□□□□ 0.43
SSR4-211ENST00000486204 PER1O15534 1290 aaPredicted RBP17.74■□□□□ 0.43
SSR4-211ENST00000486204 FBLN1P23142 703 aa17.73■□□□□ 0.43
SSR4-211ENST00000486204 MAP3K19Q56UN5 1328 aa17.72■□□□□ 0.43
SSR4-211ENST00000486204 RTL1A6NKG5 1358 aa17.72■□□□□ 0.43
SSR4-211ENST00000486204 AMER1Q5JTC6 1135 aaPredicted RBP17.72■□□□□ 0.43
SSR4-211ENST00000486204 PNPLA7Q6ZV29 1317 aa17.72■□□□□ 0.43
SSR4-211ENST00000486204 NHSQ6T4R5 1651 aa17.71■□□□□ 0.43
SSR4-211ENST00000486204 TNS2Q63HR2 1409 aa17.71■□□□□ 0.43
SSR4-211ENST00000486204 ZNF526Q8TF50 670 aaPredicted RBP17.7■□□□□ 0.42
SSR4-211ENST00000486204 TFCP2L1Q9NZI6 479 aa17.7■□□□□ 0.42
SSR4-211ENST00000486204 SMG6Q86US8 1419 aaKnown RBP17.7■□□□□ 0.42
SSR4-211ENST00000486204 SLC27A3Q5K4L6 730 aa17.69■□□□□ 0.42
SSR4-211ENST00000486204 KNSTRNQ9Y448 316 aa17.69■□□□□ 0.42
SSR4-211ENST00000486204 ERBB3P21860 1342 aa17.69■□□□□ 0.42
SSR4-211ENST00000486204 KIF24Q5T7B8 1368 aa17.68■□□□□ 0.42
SSR4-211ENST00000486204 NPC1L1Q9UHC9 1359 aa17.68■□□□□ 0.42
SSR4-211ENST00000486204 RRS1Q15050 365 aaKnown RBP17.68■□□□□ 0.42
SSR4-211ENST00000486204 HOXC9P31274 260 aa17.67■□□□□ 0.42
SSR4-211ENST00000486204 IP6K1Q92551 441 aa17.67■□□□□ 0.42
SSR4-211ENST00000486204 COL24A1Q17RW2 1714 aa17.66■□□□□ 0.42
SSR4-211ENST00000486204 FLT4P35916 1363 aa17.66■□□□□ 0.42
SSR4-211ENST00000486204 EMILIN1Q9Y6C2 1016 aa17.65■□□□□ 0.42
SSR4-211ENST00000486204 BTAF1O14981 1849 aa17.64■□□□□ 0.41
SSR4-211ENST00000486204 IL2RBP14784 551 aa17.64■□□□□ 0.41
SSR4-211ENST00000486204 INSRP06213 1382 aa17.64■□□□□ 0.41
SSR4-211ENST00000486204 KCNQ4P56696 695 aa17.63■□□□□ 0.41
SSR4-211ENST00000486204 ANKRD24Q8TF21 1146 aa17.63■□□□□ 0.41
SSR4-211ENST00000486204 NLRP2Q9NX02 1062 aa17.63■□□□□ 0.41
SSR4-211ENST00000486204 POLKQ9UBT6 870 aa17.63■□□□□ 0.41
SSR4-211ENST00000486204 QSER1Q2KHR3 1735 aa17.62■□□□□ 0.41
SSR4-211ENST00000486204 MSH5O43196 834 aa17.62■□□□□ 0.41
SSR4-211ENST00000486204 AMPHP49418 695 aa17.62■□□□□ 0.41
SSR4-211ENST00000486204 ADCY9O60503 1353 aa17.62■□□□□ 0.41
SSR4-211ENST00000486204 TNNT2P45379 298 aaPredicted RBP17.61■□□□□ 0.41
SSR4-211ENST00000486204 APLP1P51693 650 aa17.61■□□□□ 0.41
SSR4-211ENST00000486204 MORC1Q86VD1 984 aa17.61■□□□□ 0.41
SSR4-211ENST00000486204 HSP90AB2PQ58FF8 381 aa17.6■□□□□ 0.41
SSR4-211ENST00000486204 CC2D1BQ5T0F9 858 aaKnown RBP17.6■□□□□ 0.41
SSR4-211ENST00000486204 NCAPD2Q15021 1401 aa17.6■□□□□ 0.41
SSR4-211ENST00000486204 PKD1L3Q7Z443 1732 aa17.6■□□□□ 0.41
SSR4-211ENST00000486204 KIF3CO14782 793 aa17.59■□□□□ 0.41
SSR4-211ENST00000486204 COL23A1Q86Y22 540 aaPredicted RBP17.59■□□□□ 0.41
SSR4-211ENST00000486204 DNAJC5GQ8N7S2 189 aa17.59■□□□□ 0.41
SSR4-211ENST00000486204 CD2APQ9Y5K6 639 aa17.59■□□□□ 0.41
SSR4-211ENST00000486204 MSL1Q68DK7 614 aa17.57■□□□□ 0.4
SSR4-211ENST00000486204 DDX54Q8TDD1 881 aaKnown RBP17.57■□□□□ 0.4
SSR4-211ENST00000486204 SYTL4Q96C24 671 aaPredicted RBP17.57■□□□□ 0.4
SSR4-211ENST00000486204 LTV1Q96GA3 475 aaPredicted RBP17.57■□□□□ 0.4
SSR4-211ENST00000486204 KAT6BQ8WYB5 2073 aa17.56■□□□□ 0.4
SSR4-211ENST00000486204 CAPN15O75808 1086 aa17.56■□□□□ 0.4
SSR4-211ENST00000486204 COL3A1P02461 1466 aaPredicted RBP17.56■□□□□ 0.4
SSR4-211ENST00000486204 VIRMAQ69YN4 1812 aaKnown RBP17.55■□□□□ 0.4
SSR4-211ENST00000486204 MEGF6O75095 1541 aa17.55■□□□□ 0.4
SSR4-211ENST00000486204 TUBGCP6Q96RT7 1819 aa17.54■□□□□ 0.4
SSR4-211ENST00000486204 PPM1GO15355 546 aaPredicted RBP17.54■□□□□ 0.4
SSR4-211ENST00000486204 PRIM1P49642 420 aaKnown RBP17.54■□□□□ 0.4
SSR4-211ENST00000486204 DDX10Q13206 875 aaKnown RBP17.54■□□□□ 0.4
SSR4-211ENST00000486204 COL13A1Q5TAT6 717 aaPredicted RBP17.54■□□□□ 0.4
SSR4-211ENST00000486204 NBPF6Q5VWK0 638 aa17.54■□□□□ 0.4
SSR4-211ENST00000486204 NBPF4Q96M43 638 aa17.54■□□□□ 0.4
SSR4-211ENST00000486204 CCNL1Q9UK58 526 aaPredicted RBP17.54■□□□□ 0.4
SSR4-211ENST00000486204 CNGB1Q14028 1251 aaPredicted RBP17.52■□□□□ 0.4
SSR4-211ENST00000486204 DOT1LQ8TEK3 1739 aa17.52■□□□□ 0.39
SSR4-211ENST00000486204 ZNF316A6NFI3 1004 aaPredicted RBP17.51■□□□□ 0.39
SSR4-211ENST00000486204 TOMM70O94826 608 aa17.51■□□□□ 0.39
SSR4-211ENST00000486204 EIF4A2Q14240 407 aaKnown RBP17.51■□□□□ 0.39
SSR4-211ENST00000486204 WWC3Q9ULE0 1092 aa17.51■□□□□ 0.39
SSR4-211ENST00000486204 MTHFSP49914 203 aa17.5■□□□□ 0.39
SSR4-211ENST00000486204 USHBP1Q8N6Y0 703 aa17.5■□□□□ 0.39
SSR4-211ENST00000486204 IGSF1Q8N6C5 1336 aa17.48■□□□□ 0.39
SSR4-211ENST00000486204 TOGARAM1Q9Y4F4 1720 aa17.48■□□□□ 0.39
SSR4-211ENST00000486204 PRELPP51888 382 aa17.48■□□□□ 0.39
SSR4-211ENST00000486204 EYA1Q99502 592 aa17.48■□□□□ 0.39
SSR4-211ENST00000486204 ITGB4P16144 1822 aa17.48■□□□□ 0.39
SSR4-211ENST00000486204 TNS4Q8IZW8 715 aa17.47■□□□□ 0.39
SSR4-211ENST00000486204 PPP2R1AP30153 589 aa17.46■□□□□ 0.39
SSR4-211ENST00000486204 FLAD1Q8NFF5 587 aa17.46■□□□□ 0.39
SSR4-211ENST00000486204 LY75O60449 1722 aa17.46■□□□□ 0.39
SSR4-211ENST00000486204 IL13P35225 146 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms