RNA–Protein interactions for RNA: ENST00000485985.1

LMBR1-217, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-217ENST00000485985 DOT1LQ8TEK3 1739 aa29.09■■■□□ 2.25
LMBR1-217ENST00000485985 RRS1Q15050 365 aaKnown RBP29.09■■■□□ 2.25
LMBR1-217ENST00000485985 ZNF827Q17R98 1081 aa29.09■■■□□ 2.25
LMBR1-217ENST00000485985 AMPHP49418 695 aa29.08■■■□□ 2.25
LMBR1-217ENST00000485985 CARD14Q9BXL6 1004 aa29.08■■■□□ 2.25
LMBR1-217ENST00000485985 ARXQ96QS3 562 aa29.07■■■□□ 2.24
LMBR1-217ENST00000485985 MEGF6O75095 1541 aa29.06■■■□□ 2.24
LMBR1-217ENST00000485985 SLC27A3Q5K4L6 730 aa29.04■■■□□ 2.24
LMBR1-217ENST00000485985 AKT1S1Q96B36 256 aa29.04■■■□□ 2.24
LMBR1-217ENST00000485985 MAP2P11137 1827 aaKnown RBP29.04■■■□□ 2.24
LMBR1-217ENST00000485985 CCER1Q8TC90 406 aaPredicted RBP29.02■■■□□ 2.24
LMBR1-217ENST00000485985 MAP3K5Q99683 1374 aa29.01■■■□□ 2.23
LMBR1-217ENST00000485985 PRIM1P49642 420 aaKnown RBP29■■■□□ 2.23
LMBR1-217ENST00000485985 SYTL4Q96C24 671 aaPredicted RBP29■■■□□ 2.23
LMBR1-217ENST00000485985 SLC16A10Q8TF71 515 aa28.99■■■□□ 2.23
LMBR1-217ENST00000485985 QSER1Q2KHR3 1735 aa28.99■■■□□ 2.23
LMBR1-217ENST00000485985 SMG6Q86US8 1419 aaKnown RBP28.98■■■□□ 2.23
LMBR1-217ENST00000485985 ZNF784Q8NCA9 323 aaPredicted RBP28.98■■■□□ 2.23
LMBR1-217ENST00000485985 ZCRB1Q8TBF4 217 aaKnown RBP28.98■■■□□ 2.23
LMBR1-217ENST00000485985 INSRP06213 1382 aa28.98■■■□□ 2.23
LMBR1-217ENST00000485985 FLT4P35916 1363 aa28.98■■■□□ 2.23
LMBR1-217ENST00000485985 NBPF6Q5VWK0 638 aa28.97■■■□□ 2.23
LMBR1-217ENST00000485985 NBPF4Q96M43 638 aa28.97■■■□□ 2.23
LMBR1-217ENST00000485985 PNPLA7Q6ZV29 1317 aa28.96■■■□□ 2.23
LMBR1-217ENST00000485985 CHD4Q14839 1912 aa28.96■■■□□ 2.23
LMBR1-217ENST00000485985 KCNQ4P56696 695 aa28.96■■■□□ 2.23
LMBR1-217ENST00000485985 KIF24Q5T7B8 1368 aa28.96■■■□□ 2.23
LMBR1-217ENST00000485985 LY75O60449 1722 aa28.95■■■□□ 2.23
LMBR1-217ENST00000485985 UTRNP46939 3433 aa28.95■■■□□ 2.23
LMBR1-217ENST00000485985 HSP90AB2PQ58FF8 381 aa28.95■■■□□ 2.22
LMBR1-217ENST00000485985 USHBP1Q8N6Y0 703 aa28.95■■■□□ 2.22
LMBR1-217ENST00000485985 NSD2O96028 1365 aa28.95■■■□□ 2.22
LMBR1-217ENST00000485985 HSPA5P11021 654 aaKnown RBP28.94■■■□□ 2.22
LMBR1-217ENST00000485985 TFCP2L1Q9NZI6 479 aa28.94■■■□□ 2.22
LMBR1-217ENST00000485985 PKD1L3Q7Z443 1732 aa28.94■■■□□ 2.22
LMBR1-217ENST00000485985 EMILIN1Q9Y6C2 1016 aa28.93■■■□□ 2.22
LMBR1-217ENST00000485985 TUBGCP6Q96RT7 1819 aa28.92■■■□□ 2.22
LMBR1-217ENST00000485985 COL24A1Q17RW2 1714 aa28.92■■■□□ 2.22
LMBR1-217ENST00000485985 POLD1P28340 1107 aa28.92■■■□□ 2.22
LMBR1-217ENST00000485985 EIF4G2P78344 907 aaKnown RBP eCLIP28.92■■■□□ 2.22
LMBR1-217ENST00000485985 POLR3GLQ9BT43 218 aa28.91■■■□□ 2.22
LMBR1-217ENST00000485985 CGNL1Q0VF96 1302 aa28.9■■■□□ 2.22
LMBR1-217ENST00000485985 TOGARAM1Q9Y4F4 1720 aa28.89■■■□□ 2.22
LMBR1-217ENST00000485985 GPR162Q16538 588 aa28.88■■■□□ 2.21
LMBR1-217ENST00000485985 CCNL1Q9UK58 526 aaPredicted RBP28.88■■■□□ 2.21
LMBR1-217ENST00000485985 NCAPD2Q15021 1401 aa28.87■■■□□ 2.21
LMBR1-217ENST00000485985 KLHL34Q8N239 644 aa28.87■■■□□ 2.21
LMBR1-217ENST00000485985 ITGB4P16144 1822 aa28.86■■■□□ 2.21
LMBR1-217ENST00000485985 RAPGEF4Q8WZA2 1011 aa28.86■■■□□ 2.21
LMBR1-217ENST00000485985 TATP17735 454 aaPredicted RBP28.83■■■□□ 2.21
LMBR1-217ENST00000485985 PPM1GO15355 546 aaPredicted RBP28.81■■■□□ 2.2
LMBR1-217ENST00000485985 COL23A1Q86Y22 540 aaPredicted RBP28.8■■■□□ 2.2
LMBR1-217ENST00000485985 WASHC2AQ641Q2 1341 aa28.79■■■□□ 2.2
LMBR1-217ENST00000485985 PCDH11XQ9BZA7 1347 aa28.78■■■□□ 2.2
LMBR1-217ENST00000485985 PCDH11YQ9BZA8 1340 aa28.78■■■□□ 2.2
LMBR1-217ENST00000485985 MSH5O43196 834 aa28.78■■■□□ 2.2
LMBR1-217ENST00000485985 PELP1Q8IZL8 1130 aaKnown RBP28.78■■■□□ 2.2
LMBR1-217ENST00000485985 NLGN2Q8NFZ4 835 aa28.78■■■□□ 2.2
LMBR1-217ENST00000485985 TAF1LQ8IZX4 1826 aa28.78■■■□□ 2.2
LMBR1-217ENST00000485985 PANK3Q9H999 370 aa28.77■■■□□ 2.2
LMBR1-217ENST00000485985 POLKQ9UBT6 870 aa28.77■■■□□ 2.2
LMBR1-217ENST00000485985 C5P01031 1676 aa28.77■■■□□ 2.2
LMBR1-217ENST00000485985 TNNT2P45379 298 aaPredicted RBP28.74■■■□□ 2.19
LMBR1-217ENST00000485985 CYP27B1O15528 508 aa28.73■■■□□ 2.19
LMBR1-217ENST00000485985 MPRIPQ6WCQ1 1025 aa28.73■■■□□ 2.19
LMBR1-217ENST00000485985 HMGB2P26583 209 aaKnown RBP28.72■■■□□ 2.19
LMBR1-217ENST00000485985 C1QTNF8P60827 252 aa28.72■■■□□ 2.19
LMBR1-217ENST00000485985 PALLDQ8WX93 1383 aa28.72■■■□□ 2.19
LMBR1-217ENST00000485985 EYA1Q99502 592 aa28.71■■■□□ 2.19
LMBR1-217ENST00000485985 MSL1Q68DK7 614 aa28.7■■■□□ 2.18
LMBR1-217ENST00000485985 EIF4A2Q14240 407 aaKnown RBP28.68■■■□□ 2.18
LMBR1-217ENST00000485985 FLAD1Q8NFF5 587 aa28.68■■■□□ 2.18
LMBR1-217ENST00000485985 GRIN3BO60391 1043 aa28.67■■■□□ 2.18
LMBR1-217ENST00000485985 YBX3P16989 372 aaKnown RBP eCLIP28.67■■■□□ 2.18
LMBR1-217ENST00000485985 SMARCC1Q92922 1105 aaPredicted RBP28.66■■■□□ 2.18
LMBR1-217ENST00000485985 KIF7Q2M1P5 1343 aa28.66■■■□□ 2.18
LMBR1-217ENST00000485985 SENP3-EIF4A1A0A087X0R7 540 aa28.65■■■□□ 2.18
LMBR1-217ENST00000485985 GOLGB1Q14789 3259 aaKnown RBP28.64■■■□□ 2.18
LMBR1-217ENST00000485985 NKX1-1Q15270 411 aaPredicted RBP28.63■■■□□ 2.17
LMBR1-217ENST00000485985 PIGBQ92521 554 aa28.63■■■□□ 2.17
LMBR1-217ENST00000485985 CD2APQ9Y5K6 639 aa28.63■■■□□ 2.17
LMBR1-217ENST00000485985 C4BP0C0L5 1744 aa28.63■■■□□ 2.17
LMBR1-217ENST00000485985 SPG7Q9UQ90 795 aa28.62■■■□□ 2.17
LMBR1-217ENST00000485985 IGSF1Q8N6C5 1336 aa28.62■■■□□ 2.17
LMBR1-217ENST00000485985 GIGYF1O75420 1035 aaPredicted RBP28.6■■■□□ 2.17
LMBR1-217ENST00000485985 AK7Q96M32 723 aa28.6■■■□□ 2.17
LMBR1-217ENST00000485985 UBR3Q6ZT12 1888 aa28.59■■■□□ 2.17
LMBR1-217ENST00000485985 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.59■■■□□ 2.172e-7■□□□□ 9.4
LMBR1-217ENST00000485985 MORC1Q86VD1 984 aa28.58■■■□□ 2.17
LMBR1-217ENST00000485985 AMIGO3Q86WK7 504 aa28.58■■■□□ 2.17
LMBR1-217ENST00000485985 PLEKHG2Q9H7P9 1386 aa28.58■■■□□ 2.17
LMBR1-217ENST00000485985 KNSTRNQ9Y448 316 aa28.57■■■□□ 2.16
LMBR1-217ENST00000485985 AMER1Q5JTC6 1135 aaPredicted RBP28.56■■■□□ 2.16
LMBR1-217ENST00000485985 PHKG2P15735 406 aa28.55■■■□□ 2.16
LMBR1-217ENST00000485985 SMIM5Q71RC9 77 aa28.55■■■□□ 2.16
LMBR1-217ENST00000485985 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.54■■■□□ 2.16
LMBR1-217ENST00000485985 LOC102724428A0A0B4J2F2 783 aa28.54■■■□□ 2.16
LMBR1-217ENST00000485985 PHF14O94880 888 aa28.54■■■□□ 2.16
LMBR1-217ENST00000485985 SIK1P57059 783 aa28.54■■■□□ 2.16
LMBR1-217ENST00000485985 TMOD3Q9NYL9 352 aa28.53■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms