RNA–Protein interactions for RNA: ENST00000485901.1

HLA-DOA-204, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-204ENST00000485901 CARD14Q9BXL6 1004 aa16.52■□□□□ 0.24
HLA-DOA-204ENST00000485901 CGNL1Q0VF96 1302 aa16.51■□□□□ 0.23
HLA-DOA-204ENST00000485901 FYB1O15117 783 aa16.51■□□□□ 0.23
HLA-DOA-204ENST00000485901 AKT1S1Q96B36 256 aa16.51■□□□□ 0.23
HLA-DOA-204ENST00000485901 POLD1P28340 1107 aa16.5■□□□□ 0.23
HLA-DOA-204ENST00000485901 LRRC4BQ9NT99 713 aa16.5■□□□□ 0.23
HLA-DOA-204ENST00000485901 PANK3Q9H999 370 aa16.49■□□□□ 0.23
HLA-DOA-204ENST00000485901 GGNBP2Q9H3C7 697 aa16.48■□□□□ 0.23
HLA-DOA-204ENST00000485901 LY75O60449 1722 aa16.48■□□□□ 0.23
HLA-DOA-204ENST00000485901 KIF7Q2M1P5 1343 aa16.47■□□□□ 0.23
HLA-DOA-204ENST00000485901 ZNF827Q17R98 1081 aa16.47■□□□□ 0.23
HLA-DOA-204ENST00000485901 RTL1A6NKG5 1358 aa16.47■□□□□ 0.23
HLA-DOA-204ENST00000485901 GOLGB1Q14789 3259 aaKnown RBP16.47■□□□□ 0.23
HLA-DOA-204ENST00000485901 NSD3Q9BZ95 1437 aa16.46■□□□□ 0.23
HLA-DOA-204ENST00000485901 ZCRB1Q8TBF4 217 aaKnown RBP16.46■□□□□ 0.23
HLA-DOA-204ENST00000485901 HOXC9P31274 260 aa16.45■□□□□ 0.22
HLA-DOA-204ENST00000485901 DDX54Q8TDD1 881 aaKnown RBP16.45■□□□□ 0.22
HLA-DOA-204ENST00000485901 KIF24Q5T7B8 1368 aa16.44■□□□□ 0.22
HLA-DOA-204ENST00000485901 TFCP2L1Q9NZI6 479 aa16.44■□□□□ 0.22
HLA-DOA-204ENST00000485901 MAP3K19Q56UN5 1328 aa16.44■□□□□ 0.22
HLA-DOA-204ENST00000485901 PNPLA7Q6ZV29 1317 aa16.44■□□□□ 0.22
HLA-DOA-204ENST00000485901 ZEB1P37275 1124 aaPredicted RBP16.43■□□□□ 0.22
HLA-DOA-204ENST00000485901 AMPHP49418 695 aa16.43■□□□□ 0.22
HLA-DOA-204ENST00000485901 PRIM1P49642 420 aaKnown RBP16.43■□□□□ 0.22
HLA-DOA-204ENST00000485901 GPR162Q16538 588 aa16.43■□□□□ 0.22
HLA-DOA-204ENST00000485901 GRIN3BO60391 1043 aa16.42■□□□□ 0.22
HLA-DOA-204ENST00000485901 C1QTNF8P60827 252 aa16.42■□□□□ 0.22
HLA-DOA-204ENST00000485901 FLAD1Q8NFF5 587 aa16.42■□□□□ 0.22
HLA-DOA-204ENST00000485901 KNSTRNQ9Y448 316 aa16.42■□□□□ 0.22
HLA-DOA-204ENST00000485901 FBLN1P23142 703 aa16.41■□□□□ 0.22
HLA-DOA-204ENST00000485901 TUBGCP6Q96RT7 1819 aa16.4■□□□□ 0.22
HLA-DOA-204ENST00000485901 NSD2O96028 1365 aa16.4■□□□□ 0.22
HLA-DOA-204ENST00000485901 DOT1LQ8TEK3 1739 aa16.4■□□□□ 0.22
HLA-DOA-204ENST00000485901 SHANK3Q9BYB0 1731 aa16.4■□□□□ 0.22
HLA-DOA-204ENST00000485901 SMG6Q86US8 1419 aaKnown RBP16.4■□□□□ 0.22
HLA-DOA-204ENST00000485901 SYTL4Q96C24 671 aaPredicted RBP16.39■□□□□ 0.21
HLA-DOA-204ENST00000485901 LTV1Q96GA3 475 aaPredicted RBP16.39■□□□□ 0.21
HLA-DOA-204ENST00000485901 CCNL1Q9UK58 526 aaPredicted RBP16.39■□□□□ 0.21
HLA-DOA-204ENST00000485901 WASHC2AQ641Q2 1341 aa16.39■□□□□ 0.21
HLA-DOA-204ENST00000485901 RRS1Q15050 365 aaKnown RBP16.38■□□□□ 0.21
HLA-DOA-204ENST00000485901 RAPGEF4Q8WZA2 1011 aa16.38■□□□□ 0.21
HLA-DOA-204ENST00000485901 RGPD2P0DJD1 1756 aa16.38■□□□□ 0.21
HLA-DOA-204ENST00000485901 INSRP06213 1382 aa16.37■□□□□ 0.21
HLA-DOA-204ENST00000485901 MEGF6O75095 1541 aa16.36■□□□□ 0.21
HLA-DOA-204ENST00000485901 NBPF6Q5VWK0 638 aa16.36■□□□□ 0.21
HLA-DOA-204ENST00000485901 NBPF4Q96M43 638 aa16.36■□□□□ 0.21
HLA-DOA-204ENST00000485901 PCDH11XQ9BZA7 1347 aa16.36■□□□□ 0.21
HLA-DOA-204ENST00000485901 PCDH11YQ9BZA8 1340 aa16.36■□□□□ 0.21
HLA-DOA-204ENST00000485901 TATP17735 454 aaPredicted RBP16.35■□□□□ 0.21
HLA-DOA-204ENST00000485901 CD2APQ9Y5K6 639 aa16.35■□□□□ 0.21
HLA-DOA-204ENST00000485901 KIF20BQ96Q89 1820 aa16.34■□□□□ 0.21
HLA-DOA-204ENST00000485901 PER1O15534 1290 aaPredicted RBP16.34■□□□□ 0.21
HLA-DOA-204ENST00000485901 GIGYF1O75420 1035 aaPredicted RBP16.34■□□□□ 0.21
HLA-DOA-204ENST00000485901 MORC1Q86VD1 984 aa16.34■□□□□ 0.21
HLA-DOA-204ENST00000485901 SMARCC1Q92922 1105 aaPredicted RBP16.34■□□□□ 0.21
HLA-DOA-204ENST00000485901 FLT4P35916 1363 aa16.34■□□□□ 0.21
HLA-DOA-204ENST00000485901 TAF1LQ8IZX4 1826 aa16.33■□□□□ 0.21
HLA-DOA-204ENST00000485901 SENP3-EIF4A1A0A087X0R7 540 aa16.33■□□□□ 0.2
HLA-DOA-204ENST00000485901 PPM1GO15355 546 aaPredicted RBP16.33■□□□□ 0.2
HLA-DOA-204ENST00000485901 TNNT2P45379 298 aaPredicted RBP16.33■□□□□ 0.2
HLA-DOA-204ENST00000485901 AMER1Q5JTC6 1135 aaPredicted RBP16.33■□□□□ 0.2
HLA-DOA-204ENST00000485901 COL23A1Q86Y22 540 aaPredicted RBP16.33■□□□□ 0.2
HLA-DOA-204ENST00000485901 C5P01031 1676 aa16.32■□□□□ 0.2
HLA-DOA-204ENST00000485901 PLEKHG2Q9H7P9 1386 aa16.32■□□□□ 0.2
HLA-DOA-204ENST00000485901 HSP90AB2PQ58FF8 381 aa16.31■□□□□ 0.2
HLA-DOA-204ENST00000485901 POLKQ9UBT6 870 aa16.31■□□□□ 0.2
HLA-DOA-204ENST00000485901 EMILIN1Q9Y6C2 1016 aa16.31■□□□□ 0.2
HLA-DOA-204ENST00000485901 NKX1-1Q15270 411 aaPredicted RBP16.3■□□□□ 0.2
HLA-DOA-204ENST00000485901 KLHL34Q8N239 644 aa16.3■□□□□ 0.2
HLA-DOA-204ENST00000485901 NLGN2Q8NFZ4 835 aa16.3■□□□□ 0.2
HLA-DOA-204ENST00000485901 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.3■□□□□ 0.2
HLA-DOA-204ENST00000485901 NCAPD2Q15021 1401 aa16.29■□□□□ 0.2
HLA-DOA-204ENST00000485901 KCNQ4P56696 695 aa16.29■□□□□ 0.2
HLA-DOA-204ENST00000485901 CEP350Q5VT06 3117 aa16.29■□□□□ 0.2
HLA-DOA-204ENST00000485901 ITGB4P16144 1822 aa16.29■□□□□ 0.2
HLA-DOA-204ENST00000485901 PALLDQ8WX93 1383 aa16.28■□□□□ 0.2
HLA-DOA-204ENST00000485901 MSH5O43196 834 aa16.28■□□□□ 0.2
HLA-DOA-204ENST00000485901 PELP1Q8IZL8 1130 aaKnown RBP16.28■□□□□ 0.2
HLA-DOA-204ENST00000485901 PKD1L3Q7Z443 1732 aa16.28■□□□□ 0.2
HLA-DOA-204ENST00000485901 CC2D1BQ5T0F9 858 aaKnown RBP16.27■□□□□ 0.2
HLA-DOA-204ENST00000485901 CYP27B1O15528 508 aa16.26■□□□□ 0.19
HLA-DOA-204ENST00000485901 YBX3P16989 372 aaKnown RBP eCLIP16.26■□□□□ 0.19
HLA-DOA-204ENST00000485901 SPG7Q9UQ90 795 aa16.26■□□□□ 0.19
HLA-DOA-204ENST00000485901 NPC1L1Q9UHC9 1359 aa16.26■□□□□ 0.19
HLA-DOA-204ENST00000485901 C4BP0C0L5 1744 aa16.25■□□□□ 0.19
HLA-DOA-204ENST00000485901 UBR3Q6ZT12 1888 aa16.25■□□□□ 0.19
HLA-DOA-204ENST00000485901 SSFA2P28290 1259 aa16.25■□□□□ 0.19
HLA-DOA-204ENST00000485901 MPRIPQ6WCQ1 1025 aa16.25■□□□□ 0.19
HLA-DOA-204ENST00000485901 USHBP1Q8N6Y0 703 aa16.24■□□□□ 0.19
HLA-DOA-204ENST00000485901 AK7Q96M32 723 aa16.24■□□□□ 0.19
HLA-DOA-204ENST00000485901 ANKRD26Q9UPS8 1709 aa16.24■□□□□ 0.19
HLA-DOA-204ENST00000485901 MAP2P11137 1827 aaKnown RBP16.24■□□□□ 0.19
HLA-DOA-204ENST00000485901 CNGB1Q14028 1251 aaPredicted RBP16.22■□□□□ 0.19
HLA-DOA-204ENST00000485901 MTHFSP49914 203 aa16.21■□□□□ 0.19
HLA-DOA-204ENST00000485901 PIGBQ92521 554 aa16.21■□□□□ 0.19
HLA-DOA-204ENST00000485901 TOGARAM1Q9Y4F4 1720 aa16.21■□□□□ 0.19
HLA-DOA-204ENST00000485901 ADCY9O60503 1353 aa16.21■□□□□ 0.19
HLA-DOA-204ENST00000485901 LOC102724428A0A0B4J2F2 783 aa16.2■□□□□ 0.18
HLA-DOA-204ENST00000485901 SIK1P57059 783 aa16.2■□□□□ 0.18
HLA-DOA-204ENST00000485901 EIF4A2Q14240 407 aaKnown RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms