RNA–Protein interactions for RNA: ENST00000485744.5

HMCN1-204, Transcript of hemicentin 1, humanhuman

TSL 2

Gene HMCN1, Length 1,884 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1-204ENST00000485744 PKD1L3Q7Z443 1732 aa13.64□□□□□ -0.23
HMCN1-204ENST00000485744 QTRT2Q9H974 415 aaKnown RBP13.64□□□□□ -0.23
HMCN1-204ENST00000485744 RGS17Q9UGC6 210 aaPredicted RBP13.64□□□□□ -0.23
HMCN1-204ENST00000485744 HNRNPUQ00839 825 aaKnown RBP eCLIP13.63□□□□□ -0.23
HMCN1-204ENST00000485744 FAM98CQ17RN3 349 aaKnown RBP13.63□□□□□ -0.23
HMCN1-204ENST00000485744 MTHFSDQ2M296 383 aaKnown RBP13.63□□□□□ -0.23
HMCN1-204ENST00000485744 IL2RBP14784 551 aa13.63□□□□□ -0.23
HMCN1-204ENST00000485744 OVOS2A0A0G2JMS6 1433 aa13.62□□□□□ -0.23
HMCN1-204ENST00000485744 DISP2A7MBM2 1401 aa13.62□□□□□ -0.23
HMCN1-204ENST00000485744 LRRC37A3O60309 1634 aa13.62□□□□□ -0.23
HMCN1-204ENST00000485744 TATP17735 454 aaPredicted RBP13.62□□□□□ -0.23
HMCN1-204ENST00000485744 GJD4Q96KN9 370 aaPredicted RBP13.62□□□□□ -0.23
HMCN1-204ENST00000485744 TRPC5Q9UL62 973 aaPredicted RBP13.62□□□□□ -0.23
HMCN1-204ENST00000485744 TMPOP42166 694 aaKnown RBP13.61□□□□□ -0.23
HMCN1-204ENST00000485744 PNNQ9H307 717 aaKnown RBP13.61□□□□□ -0.23
HMCN1-204ENST00000485744 BRWD3Q6RI45 1802 aa13.6□□□□□ -0.23
HMCN1-204ENST00000485744 NEFMP07197 916 aa13.6□□□□□ -0.23
HMCN1-204ENST00000485744 ZNF772Q68DY9 489 aaPredicted RBP13.6□□□□□ -0.23
HMCN1-204ENST00000485744 PHF23Q9BUL5 403 aaPredicted RBP13.6□□□□□ -0.23
HMCN1-204ENST00000485744 THSD7AQ9UPZ6 1657 aa13.6□□□□□ -0.23
HMCN1-204ENST00000485744 A0A0G2JS52 829 aa13.59□□□□□ -0.23
HMCN1-204ENST00000485744 RIPK4P57078 832 aa13.59□□□□□ -0.23
HMCN1-204ENST00000485744 MYT1Q01538 1121 aa13.59□□□□□ -0.23
HMCN1-204ENST00000485744 NFE2L2Q16236 605 aa13.59□□□□□ -0.23
HMCN1-204ENST00000485744 THRAP3Q9Y2W1 955 aaKnown RBP13.59□□□□□ -0.23
HMCN1-204ENST00000485744 DCTN1Q14203 1278 aa13.59□□□□□ -0.23
HMCN1-204ENST00000485744 ZNF530Q6P9A1 599 aaPredicted RBP13.59□□□□□ -0.23
HMCN1-204ENST00000485744 POTEAQ6S8J7 498 aa13.59□□□□□ -0.23
HMCN1-204ENST00000485744 BARGINQ6ZT62 677 aa13.59□□□□□ -0.23
HMCN1-204ENST00000485744 CYP27B1O15528 508 aa13.58□□□□□ -0.24
HMCN1-204ENST00000485744 PLEKHO1Q53GL0 409 aaPredicted RBP13.58□□□□□ -0.24
HMCN1-204ENST00000485744 ZCRB1Q8TBF4 217 aaKnown RBP13.58□□□□□ -0.24
HMCN1-204ENST00000485744 DDX54Q8TDD1 881 aaKnown RBP13.58□□□□□ -0.24
HMCN1-204ENST00000485744 THUMPD2Q9BTF0 503 aaKnown RBP13.58□□□□□ -0.24
HMCN1-204ENST00000485744 TRIM35Q9UPQ4 493 aa13.57□□□□□ -0.24
HMCN1-204ENST00000485744 AMOTQ4VCS5 1084 aa13.57□□□□□ -0.24
HMCN1-204ENST00000485744 MCM10Q7L590 875 aa13.57□□□□□ -0.24
HMCN1-204ENST00000485744 GAS2L2Q8NHY3 880 aa13.57□□□□□ -0.24
HMCN1-204ENST00000485744 SPG7Q9UQ90 795 aa13.57□□□□□ -0.24
HMCN1-204ENST00000485744 SCN11AQ9UI33 1791 aa13.56□□□□□ -0.24
HMCN1-204ENST00000485744 TNS2Q63HR2 1409 aa13.56□□□□□ -0.24
HMCN1-204ENST00000485744 DDB1Q16531 1140 aa13.56□□□□□ -0.24
HMCN1-204ENST00000485744 MPRIPQ6WCQ1 1025 aa13.56□□□□□ -0.24
HMCN1-204ENST00000485744 MAP3K5Q99683 1374 aa13.56□□□□□ -0.24
HMCN1-204ENST00000485744 EXOC5O00471 708 aa13.55□□□□□ -0.24
HMCN1-204ENST00000485744 PHKG2P15735 406 aa13.55□□□□□ -0.24
HMCN1-204ENST00000485744 FAM182BQ5T319 152 aa13.55□□□□□ -0.24
HMCN1-204ENST00000485744 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.55□□□□□ -0.24
HMCN1-204ENST00000485744 PCDH11XQ9BZA7 1347 aa13.55□□□□□ -0.24
HMCN1-204ENST00000485744 PCDH11YQ9BZA8 1340 aa13.55□□□□□ -0.24
HMCN1-204ENST00000485744 TOGARAM1Q9Y4F4 1720 aa13.55□□□□□ -0.24
HMCN1-204ENST00000485744 GNAT3A8MTJ3 354 aa13.55□□□□□ -0.24
HMCN1-204ENST00000485744 C1orf141Q5JVX7 400 aa13.55□□□□□ -0.24
HMCN1-204ENST00000485744 WWC1Q8IX03 1113 aa13.55□□□□□ -0.24
HMCN1-204ENST00000485744 SEPT12Q8IYM1 358 aa13.55□□□□□ -0.24
HMCN1-204ENST00000485744 LGR6Q9HBX8 967 aa13.55□□□□□ -0.24
HMCN1-204ENST00000485744 RBM6P78332 1123 aaKnown RBP13.54□□□□□ -0.24
HMCN1-204ENST00000485744 AKAP4Q5JQC9 854 aa13.54□□□□□ -0.24
HMCN1-204ENST00000485744 CDCA7Q9BWT1 371 aaPredicted RBP13.54□□□□□ -0.24
HMCN1-204ENST00000485744 KDM6AO15550 1401 aaPredicted RBP13.54□□□□□ -0.24
HMCN1-204ENST00000485744 ITGB4P16144 1822 aa13.53□□□□□ -0.24
HMCN1-204ENST00000485744 ONECUT3O60422 494 aaPredicted RBP13.53□□□□□ -0.24
HMCN1-204ENST00000485744 IFNL2Q8IZJ0 200 aa13.53□□□□□ -0.24
HMCN1-204ENST00000485744 MARCH10Q8NA82 808 aaPredicted RBP13.53□□□□□ -0.24
HMCN1-204ENST00000485744 IL17REQ8NFR9 667 aa13.53□□□□□ -0.24
HMCN1-204ENST00000485744 DOT1LQ8TEK3 1739 aa13.53□□□□□ -0.24
HMCN1-204ENST00000485744 RXRBP28702 533 aa13.53□□□□□ -0.24
HMCN1-204ENST00000485744 ZBED9Q6R2W3 1325 aa13.53□□□□□ -0.24
HMCN1-204ENST00000485744 ZNF521Q96K83 1311 aa13.53□□□□□ -0.24
HMCN1-204ENST00000485744 ADAMTS7Q9UKP4 1686 aa13.53□□□□□ -0.24
HMCN1-204ENST00000485744 PLEKHG2Q9H7P9 1386 aa13.52□□□□□ -0.25
HMCN1-204ENST00000485744 RTF1Q92541 710 aaKnown RBP13.52□□□□□ -0.25
HMCN1-204ENST00000485744 CDCA7LQ96GN5 454 aa13.52□□□□□ -0.25
HMCN1-204ENST00000485744 SPINK5Q9NQ38 1064 aaPredicted RBP13.52□□□□□ -0.25
HMCN1-204ENST00000485744 SIPA1L3O60292 1781 aaPredicted RBP13.52□□□□□ -0.25
HMCN1-204ENST00000485744 RGS12O14924 1447 aa13.51□□□□□ -0.25
HMCN1-204ENST00000485744 CCDC27Q2M243 656 aa13.5□□□□□ -0.25
HMCN1-204ENST00000485744 SBF2Q86WG5 1849 aa13.5□□□□□ -0.25
HMCN1-204ENST00000485744 RNMTO43148 476 aaKnown RBP13.5□□□□□ -0.25
HMCN1-204ENST00000485744 CEMIPQ8WUJ3 1361 aa13.49□□□□□ -0.25
HMCN1-204ENST00000485744 PDE3BQ13370 1112 aa13.49□□□□□ -0.25
HMCN1-204ENST00000485744 MIS18AQ9NYP9 233 aa13.49□□□□□ -0.25
HMCN1-204ENST00000485744 LMOD3Q0VAK6 560 aa13.48□□□□□ -0.25
HMCN1-204ENST00000485744 DCAF5Q96JK2 942 aa13.48□□□□□ -0.25
HMCN1-204ENST00000485744 LAS1LQ9Y4W2 734 aaKnown RBP13.48□□□□□ -0.25
HMCN1-204ENST00000485744 NKX1-1Q15270 411 aaPredicted RBP13.48□□□□□ -0.25
HMCN1-204ENST00000485744 ACSBG1Q96GR2 724 aa13.48□□□□□ -0.25
HMCN1-204ENST00000485744 HTATSF1O43719 755 aaKnown RBP13.47□□□□□ -0.25
HMCN1-204ENST00000485744 NFATC2IPQ8NCF5 419 aa13.47□□□□□ -0.25
HMCN1-204ENST00000485744 TSR2Q969E8 191 aaKnown RBP13.47□□□□□ -0.25
HMCN1-204ENST00000485744 GOLGA2Q08379 1002 aa13.46□□□□□ -0.25
HMCN1-204ENST00000485744 NGEFQ8N5V2 710 aa13.46□□□□□ -0.25
HMCN1-204ENST00000485744 NCBP3Q53F19 620 aaKnown RBP13.46□□□□□ -0.26
HMCN1-204ENST00000485744 PTF1AQ7RTS3 328 aa13.46□□□□□ -0.26
HMCN1-204ENST00000485744 KRT27Q7Z3Y8 459 aa13.46□□□□□ -0.26
HMCN1-204ENST00000485744 SYTL4Q96C24 671 aaPredicted RBP13.46□□□□□ -0.26
HMCN1-204ENST00000485744 MRC1P22897 1456 aa13.45□□□□□ -0.26
HMCN1-204ENST00000485744 KDM3BQ7LBC6 1761 aa13.45□□□□□ -0.26
HMCN1-204ENST00000485744 KCNQ2O43526 872 aa13.45□□□□□ -0.26
HMCN1-204ENST00000485744 HSP90AB1P08238 724 aaKnown RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms